PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000261326	[[33767481, 33767644], [33775219, 33775309], [33778652, 33778719], [33779645, 33780287], [33783075, 33783152], [33785039, 33785239], [33793328, 33793445], [33795478, 33795940], [33800017, 33800180], [33828884, 33828963], [33831121, 33831246], [33836930, 33837036], [33839999, 33840138], [33846711, 33846816], [33848495, 33852120]]	[[33767502, 33767644], [33775219, 33775309], [33778652, 33778719], [33779645, 33780287], [33783075, 33783152], [33785039, 33785239], [33793328, 33793445], [33795478, 33795940], [33800017, 33800180], [33828884, 33828963], [33831121, 33831246], [33836930, 33837036], [33839999, 33840138], [33846711, 33846816], [33848495, 33848648]]
ENST00000588132	[[33836809, 33837036], [33839999, 33840138], [33846711, 33846777]]	None
NM_017947	[[33767479, 33767644], [33775219, 33775309], [33778652, 33778719], [33779645, 33780287], [33783075, 33783152], [33785039, 33785239], [33793328, 33793445], [33795478, 33795940], [33800017, 33800180], [33828884, 33828963], [33831121, 33831246], [33836930, 33837036], [33839999, 33840138], [33846711, 33846816], [33848495, 33848685]]	[[33767502, 33767644], [33775219, 33775309], [33778652, 33778719], [33779645, 33780287], [33783075, 33783152], [33785039, 33785239], [33793328, 33793445], [33795478, 33795940], [33800017, 33800180], [33828884, 33828963], [33831121, 33831246], [33836930, 33837036], [33839999, 33840138], [33846711, 33846816], [33848495, 33848648]]

Promoter

Chrom	Start	End	Description
chr18	33767446	33767471	CAGE_peak_2_at_MOCOS_5end
chr18	33767473	33767498	CAGE_peak_1_at_MOCOS_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr18	GH18I036075	36075478	36076732	1.06	[{'connected_gene': 'ZNF397', 'score': 19.42}, {'connected_gene': 'ELP2', 'score': 13.71}, {'connected_gene': 'RPRD1A', 'score': 13.25}, {'connected_gene': 'ENSG00000268573', 'score': 12.67}, {'connected_gene': 'MOCOS', 'score': 10.74}, {'connected_gene': 'FHOD3', 'score': 10.42}, {'connected_gene': 'ENSG00000267583', 'score': 10.06}, {'connected_gene': 'C18orf21', 'score': 9.98}, {'connected_gene': 'GC18P036078', 'score': 0.77}]
chr18	GH18I036017	36017601	36018001	0.91	[{'connected_gene': 'C18orf21', 'score': 11.16}, {'connected_gene': 'FHOD3', 'score': 10.65}, {'connected_gene': 'MOCOS', 'score': 10.57}, {'connected_gene': 'GC18M035972', 'score': 0.26}, {'connected_gene': 'RPRD1A', 'score': 0.25}]
chr8	GH08I056173	56173257	56174502	0.49	[{'connected_gene': 'CHCHD7', 'score': 11.6}, {'connected_gene': 'PLAG1', 'score': 11.6}, {'connected_gene': 'MOS', 'score': 11.24}, {'connected_gene': 'GC08M056160', 'score': 0.44}, {'connected_gene': 'GC08M056122', 'score': 0.23}, {'connected_gene': 'ENSG00000221093', 'score': 0.23}]
chr8	GH08I056168	56167992	56168433	0.4	[{'connected_gene': 'CHCHD7', 'score': 10.84}, {'connected_gene': 'PLAG1', 'score': 10.84}, {'connected_gene': 'MOS', 'score': 10.78}, {'connected_gene': 'GC08M056160', 'score': 0.39}, {'connected_gene': 'GC08M056122', 'score': 0.25}, {'connected_gene': 'ENSG00000221093', 'score': 0.25}]
chr18	GH18I036511	36511176	36512734	0.77	[{'connected_gene': 'KIAA1328', 'score': 10.41}, {'connected_gene': 'MOCOS', 'score': 4.76}, {'connected_gene': 'GC18P036374', 'score': 0.12}, {'connected_gene': 'LOC105372071', 'score': 0.1}, {'connected_gene': 'FHOD3', 'score': 0.08}]
chr18	GH18I036111	36111685	36113228	0.38	[{'connected_gene': 'ELP2', 'score': 15.21}, {'connected_gene': 'MOCOS', 'score': 11.03}, {'connected_gene': 'FHOD3', 'score': 10.12}, {'connected_gene': 'LOC101927809', 'score': 5.5}, {'connected_gene': 'SLC39A6', 'score': 0.37}, {'connected_gene': 'GC18M036078', 'score': 0.29}]
chr18	GH18I036149	36149840	36154767	0.83	[{'connected_gene': 'ELP2', 'score': 33.35}, {'connected_gene': 'MOCOS', 'score': 20.93}, {'connected_gene': 'LOC791126', 'score': 4.23}, {'connected_gene': 'PIR50550', 'score': 0.77}, {'connected_gene': 'SLC39A6', 'score': 0.34}]
chr18	GH18I036178	36178052	36181750	1.09	[{'connected_gene': 'ELP2', 'score': 37.05}, {'connected_gene': 'MOCOS', 'score': 10.46}, {'connected_gene': 'LOC791126', 'score': 4.35}, {'connected_gene': 'GC18P036175', 'score': 0.77}, {'connected_gene': 'LOC101927809', 'score': 0.44}]
chr18	GH18I036121	36121478	36121627	0.4	[{'connected_gene': 'ELP2', 'score': 15.28}, {'connected_gene': 'MOCOS', 'score': 9.37}, {'connected_gene': 'SLC39A6', 'score': 0.44}, {'connected_gene': 'GC18M036078', 'score': 0.26}]
chr18	GH18I036127	36127934	36133133	2.31	[{'connected_gene': 'ELP2', 'score': 588.47}, {'connected_gene': 'SLC39A6', 'score': 550.77}, {'connected_gene': 'ENSG00000268573', 'score': 42.41}, {'connected_gene': 'ZNF397', 'score': 24.3}, {'connected_gene': 'KIAA1328', 'score': 11.6}, {'connected_gene': 'LOC101927809', 'score': 10.84}, {'connected_gene': 'MOCOS', 'score': 9.42}, {'connected_gene': 'LOC791126', 'score': 4.2}, {'connected_gene': 'PIR50550', 'score': 0.31}]
chr18	GH18I036041	36041790	36041849	0.5	[{'connected_gene': 'RPRD1A', 'score': 550.31}, {'connected_gene': 'FHOD3', 'score': 10.51}, {'connected_gene': 'MOCOS', 'score': 10.11}, {'connected_gene': 'GC18M035972', 'score': 0.2}]
chr18	GH18I036096	36096149	36098752	0.71	[{'connected_gene': 'RPRD1A', 'score': 13.19}, {'connected_gene': 'MOCOS', 'score': 10.99}, {'connected_gene': 'FHOD3', 'score': 10.78}, {'connected_gene': 'ELP2', 'score': 6.98}, {'connected_gene': 'GC18M036078', 'score': 0.37}]
chr18	GH18I036098	36098855	36100743	0.62	[{'connected_gene': 'RPRD1A', 'score': 13.07}, {'connected_gene': 'MOCOS', 'score': 11.0}, {'connected_gene': 'FHOD3', 'score': 10.78}, {'connected_gene': 'LOC105372066', 'score': 10.32}, {'connected_gene': 'ELP2', 'score': 5.58}, {'connected_gene': 'GC18M036078', 'score': 0.34}]
chr18	GH18I036109	36109303	36110649	0.56	[{'connected_gene': 'MOCOS', 'score': 19.36}, {'connected_gene': 'FHOD3', 'score': 10.12}, {'connected_gene': 'SLC39A6', 'score': 0.37}, {'connected_gene': 'ELP2', 'score': 0.37}, {'connected_gene': 'GC18M036078', 'score': 0.29}]
chr18	GH18I036110	36110744	36111491	0.2	[{'connected_gene': 'MOCOS', 'score': 20.14}, {'connected_gene': 'FHOD3', 'score': 10.12}, {'connected_gene': 'SLC39A6', 'score': 0.37}, {'connected_gene': 'ELP2', 'score': 0.37}, {'connected_gene': 'GC18M036078', 'score': 0.29}]
chr18	GH18I036101	36101072	36102204	0.49	[{'connected_gene': 'MOCOS', 'score': 11.0}, {'connected_gene': 'FHOD3', 'score': 10.78}, {'connected_gene': 'LOC105372066', 'score': 10.35}, {'connected_gene': 'RPRD1A', 'score': 6.63}, {'connected_gene': 'GC18M036078', 'score': 0.34}, {'connected_gene': 'ELP2', 'score': 0.31}]
chr18	GH18I036307	36307173	36311229	1.04	[{'connected_gene': 'MOCOS', 'score': 10.57}, {'connected_gene': 'FHOD3', 'score': 0.39}, {'connected_gene': 'GC18P036374', 'score': 0.2}]
chr18	GH18I036305	36305442	36306833	0.38	[{'connected_gene': 'MOCOS', 'score': 10.57}, {'connected_gene': 'FHOD3', 'score': 0.44}, {'connected_gene': 'GC18P036374', 'score': 0.2}]
chr18	GH18I036302	36302780	36304131	0.46	[{'connected_gene': 'MOCOS', 'score': 10.57}, {'connected_gene': 'C18orf21', 'score': 9.66}, {'connected_gene': 'FHOD3', 'score': 0.44}, {'connected_gene': 'GC18P036374', 'score': 0.19}]
chr8	GH08I056167	56167222	56167371	0.31	[{'connected_gene': 'MOS', 'score': 10.88}, {'connected_gene': 'CHCHD7', 'score': 10.84}, {'connected_gene': 'PLAG1', 'score': 10.84}, {'connected_gene': 'GC08M056160', 'score': 0.37}, {'connected_gene': 'GC08M056122', 'score': 0.25}, {'connected_gene': 'ENSG00000221093', 'score': 0.25}]
chr18	GH18I036106	36106913	36108205	0.38	[{'connected_gene': 'MOCOS', 'score': 11.1}, {'connected_gene': 'ELP2', 'score': 0.34}, {'connected_gene': 'GC18M036078', 'score': 0.31}]
chr18	GH18I036216	36216751	36218623	0.54	[{'connected_gene': 'MOCOS', 'score': 12.68}, {'connected_gene': 'ENSG00000274849', 'score': 0.31}, {'connected_gene': 'RNU4-3P', 'score': 0.25}]
chr18	GH18I036212	36212598	36212747	0.52	[{'connected_gene': 'MOCOS', 'score': 6.74}, {'connected_gene': 'ENSG00000274849', 'score': 0.34}, {'connected_gene': 'RNU4-3P', 'score': 0.23}]
chr8	GH08I056061	56060400	56060601	0.72	[{'connected_gene': 'MOS', 'score': 10.01}, {'connected_gene': 'PSMC6P1', 'score': 0.44}, {'connected_gene': 'PIR52236', 'score': 0.39}, {'connected_gene': 'GC08P056003', 'score': 0.22}]
chr18	GH18I035671	35671577	35673516	0.54	[{'connected_gene': 'MOCOS', 'score': 9.66}, {'connected_gene': 'LOC105372065', 'score': 0.44}, {'connected_gene': 'ENSG00000266965', 'score': 0.18}, {'connected_gene': 'GALNT1', 'score': 0.16}]
chr18	GH18I036186	36186558	36189651	2.17	[{'connected_gene': 'MOCOS', 'score': 564.51}, {'connected_gene': 'ENSG00000274849', 'score': 550.77}, {'connected_gene': 'LOC101927809', 'score': 550.77}, {'connected_gene': 'ELP2', 'score': 26.48}, {'connected_gene': 'LOC791126', 'score': 4.28}]
chr8	GH08I056093	56093742	56093911	0.67	[{'connected_gene': 'MOS', 'score': 11.56}, {'connected_gene': 'NPM1P21', 'score': 0.44}, {'connected_gene': 'CERNA3', 'score': 0.37}, {'connected_gene': 'GC08P056003', 'score': 0.16}]
chr8	GH08I056113	56113928	56113987	0.61	[{'connected_gene': 'MOS', 'score': 550.77}, {'connected_gene': 'NPM1P21', 'score': 0.39}, {'connected_gene': 'GC08P056003', 'score': 0.14}]
chr18	GH18I036265	36265001	36265176	0.61	[{'connected_gene': 'RNU4-3P', 'score': 550.77}, {'connected_gene': 'GC18P036265', 'score': 550.77}, {'connected_gene': 'FHOD3', 'score': 11.24}, {'connected_gene': 'LOC791126', 'score': 0.44}, {'connected_gene': 'MOCOS', 'score': 0.18}]
chr18	GH18I036094	36094224	36095572	0.46	[{'connected_gene': 'ENSG00000268573', 'score': 16.13}, {'connected_gene': 'ZNF397', 'score': 12.09}, {'connected_gene': 'FHOD3', 'score': 10.68}, {'connected_gene': 'MOCOS', 'score': 10.63}, {'connected_gene': 'LOC105372066', 'score': 10.21}, {'connected_gene': 'C18orf21', 'score': 10.0}, {'connected_gene': 'ELP2', 'score': 6.93}, {'connected_gene': 'RPRD1A', 'score': 5.08}, {'connected_gene': 'GC18M036078', 'score': 0.37}]
chr18	GH18I036175	36175015	36177742	1.13	[{'connected_gene': 'GC18P036175', 'score': 550.77}, {'connected_gene': 'ELP2', 'score': 33.17}, {'connected_gene': 'MOCOS', 'score': 11.22}, {'connected_gene': 'LOC101927809', 'score': 0.39}]
chr18	GH18I036211	36211873	36212127	0.2	[{'connected_gene': 'ENSG00000274849', 'score': 0.34}, {'connected_gene': 'MOCOS', 'score': 0.34}, {'connected_gene': 'RNU4-3P', 'score': 0.23}]
chr18	GH18I036200	36200418	36200567	0.86	[{'connected_gene': 'ENSG00000274849', 'score': 0.39}, {'connected_gene': 'MOCOS', 'score': 0.39}, {'connected_gene': 'RNU4-3P', 'score': 0.21}]