PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000336451	[[151725988, 151726402], [151726854, 151726971], [151738413, 151738534], [151742379, 151742456], [151743675, 151743740], [151744659, 151744766], [151748616, 151748717], [151751272, 151751312], [151754289, 151754365], [151757554, 151757689], [151765600, 151765760]]	[[151726369, 151726402], [151726854, 151726971], [151738413, 151738534], [151742379, 151742456], [151743675, 151743740], [151744659, 151744766], [151748616, 151748717], [151751272, 151751312], [151754289, 151754345]]
ENST00000367303	[[151725988, 151726402], [151726854, 151726971], [151738413, 151738534], [151742379, 151742456], [151743675, 151743740], [151744659, 151744766], [151748616, 151748717], [151751272, 151751312], [151754289, 151754365], [151757580, 151757689], [151766442, 151766960], [151773150, 151773259]]	[[151726369, 151726402], [151726854, 151726971], [151738413, 151738534], [151742379, 151742456], [151743675, 151743740], [151744659, 151744766], [151748616, 151748717], [151751272, 151751312], [151754289, 151754365], [151757580, 151757689], [151766442, 151766946]]
ENST00000444024	[[151738470, 151738534], [151742379, 151742456], [151743675, 151743740], [151744659, 151744766], [151748616, 151748717], [151751272, 151751312], [151754289, 151754365], [151757580, 151757689], [151773150, 151773254]]	[[151738470, 151738534], [151742379, 151742456], [151743675, 151743740], [151744659, 151744766], [151748616, 151748717], [151751272, 151751312], [151754289, 151754365], [151757580, 151757683]]
ENST00000491268	[[151757369, 151757689], [151766442, 151766960]]	None
NM_017909	[[151725896, 151726402], [151726854, 151726971], [151738413, 151738534], [151742379, 151742456], [151743675, 151743740], [151744659, 151744766], [151748616, 151748717], [151751272, 151751312], [151754289, 151754365], [151757580, 151757689], [151766442, 151766960], [151773150, 151773316]]	[[151726369, 151726402], [151726854, 151726971], [151738413, 151738534], [151742379, 151742456], [151743675, 151743740], [151744659, 151744766], [151748616, 151748717], [151751272, 151751312], [151754289, 151754365], [151757580, 151757689], [151766442, 151766946]]
NM_001271937	[[151725896, 151726402], [151726854, 151726971], [151738413, 151738534], [151742379, 151742456], [151743675, 151743740], [151744659, 151744766], [151748616, 151748717], [151751272, 151751312], [151754289, 151754365], [151757580, 151757689], [151773150, 151773316]]	[[151726369, 151726402], [151726854, 151726971], [151738413, 151738534], [151742379, 151742456], [151743675, 151743740], [151744659, 151744766], [151748616, 151748717], [151751272, 151751312], [151754289, 151754365], [151757580, 151757683]]

Promoter

Chrom	Start	End	Description
chr6	151773163	151773184	CAGE_peak_3_at_RMND1_5end
chr6	151773201	151773226	CAGE_peak_2_at_RMND1_5end
chr6	151773232	151773298	CAGE_peak_1_at_RMND1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I151323	151323556	151327974	2.17	[{'connected_gene': 'AKAP12', 'score': 555.46}, {'connected_gene': 'ZBTB2', 'score': 10.63}, {'connected_gene': 'ENSG00000232290', 'score': 10.32}, {'connected_gene': 'RMND1', 'score': 5.25}, {'connected_gene': 'RN7SKP268', 'score': 0.44}, {'connected_gene': 'PIR45449', 'score': 0.31}, {'connected_gene': 'GC06P151355', 'score': 0.31}]
chr6	GH06I151379	151379266	151381290	1.29	[{'connected_gene': 'AKAP12', 'score': 10.37}, {'connected_gene': 'RMND1', 'score': 9.79}, {'connected_gene': 'ZBTB2', 'score': 4.51}, {'connected_gene': 'CCDC170', 'score': 2.24}, {'connected_gene': 'GC06M151379', 'score': 0.77}, {'connected_gene': 'ENSG00000252615', 'score': 0.77}]
chr6	GH06I151373	151373183	151375921	1.33	[{'connected_gene': 'AKAP12', 'score': 10.97}, {'connected_gene': 'RMND1', 'score': 5.03}, {'connected_gene': 'GC06M151379', 'score': 0.77}, {'connected_gene': 'ENSG00000252615', 'score': 0.77}, {'connected_gene': 'ZBTB2', 'score': 0.37}, {'connected_gene': 'PIR45449', 'score': 0.34}, {'connected_gene': 'GC06P151355', 'score': 0.34}]
chr6	GH06I151492	151492912	151495295	2.11	[{'connected_gene': 'CCDC170', 'score': 568.54}, {'connected_gene': 'RMND1', 'score': 23.17}, {'connected_gene': 'HSPA8P15', 'score': 16.1}, {'connected_gene': 'ZBTB2', 'score': 12.96}, {'connected_gene': 'ARMT1', 'score': 11.32}, {'connected_gene': 'ESR1', 'score': 4.4}, {'connected_gene': 'GC06M151579', 'score': 0.17}]
chr6	GH06I151441	151441026	151441410	0.49	[{'connected_gene': 'ZBTB2', 'score': 10.77}, {'connected_gene': 'RMND1', 'score': 9.96}, {'connected_gene': 'CCDC170', 'score': 5.98}, {'connected_gene': 'HSPA8P15', 'score': 0.31}]
chr6	GH06I151386	151386946	151393862	2.57	[{'connected_gene': 'ZBTB2', 'score': 556.0}, {'connected_gene': 'HSPA8P15', 'score': 16.16}, {'connected_gene': 'RMND1', 'score': 14.58}, {'connected_gene': 'CCDC170', 'score': 1.24}, {'connected_gene': 'GC06M151379', 'score': 0.39}, {'connected_gene': 'ENSG00000252615', 'score': 0.39}]
chr6	GH06I151475	151475601	151476355	1	[{'connected_gene': 'RMND1', 'score': 13.94}, {'connected_gene': 'CCDC170', 'score': 0.37}, {'connected_gene': 'ARMT1', 'score': 0.34}]
chr6	GH06I151481	151481401	151483399	0.87	[{'connected_gene': 'RMND1', 'score': 10.29}, {'connected_gene': 'CCDC170', 'score': 8.41}, {'connected_gene': 'ZBTB2', 'score': 2.26}, {'connected_gene': 'ARMT1', 'score': 0.29}]
chr6	GH06I151394	151394722	151395575	0.31	[{'connected_gene': 'RMND1', 'score': 20.82}, {'connected_gene': 'ARMT1', 'score': 11.79}, {'connected_gene': 'AKAP12', 'score': 10.54}, {'connected_gene': 'ZBTB2', 'score': 0.77}, {'connected_gene': 'HSPA8P15', 'score': 0.37}]
chr6	GH06I151399	151399356	151400625	0.65	[{'connected_gene': 'RMND1', 'score': 21.76}, {'connected_gene': 'ARMT1', 'score': 11.38}, {'connected_gene': 'AKAP12', 'score': 10.54}, {'connected_gene': 'ZBTB2', 'score': 0.44}, {'connected_gene': 'HSPA8P15', 'score': 0.39}]
chr6	GH06I151487	151487540	151487717	0.22	[{'connected_gene': 'RMND1', 'score': 11.51}, {'connected_gene': 'ARMT1', 'score': 11.51}, {'connected_gene': 'CCDC170', 'score': 0.44}]
chr6	GH06I151501	151501268	151503066	0.84	[{'connected_gene': 'RMND1', 'score': 10.6}, {'connected_gene': 'ARMT1', 'score': 10.6}, {'connected_gene': 'CCDC170', 'score': 9.19}, {'connected_gene': 'GC06M151579', 'score': 0.18}]
chr6	GH06I151505	151505686	151505835	0.31	[{'connected_gene': 'RMND1', 'score': 10.59}, {'connected_gene': 'ARMT1', 'score': 10.59}, {'connected_gene': 'CCDC170', 'score': 0.39}, {'connected_gene': 'GC06M151579', 'score': 0.18}]
chr6	GH06I151425	151425166	151426114	0.38	[{'connected_gene': 'RMND1', 'score': 26.91}, {'connected_gene': 'ARMT1', 'score': 11.8}, {'connected_gene': 'ZBTB2', 'score': 11.49}, {'connected_gene': 'AKAP12', 'score': 9.5}, {'connected_gene': 'HSPA8P15', 'score': 0.39}]
chr6	GH06I151497	151497202	151500400	1.25	[{'connected_gene': 'RMND1', 'score': 23.58}, {'connected_gene': 'ARMT1', 'score': 11.16}, {'connected_gene': 'RNU6-813P', 'score': 10.8}, {'connected_gene': 'CCDC170', 'score': 10.58}, {'connected_gene': 'ZBTB2', 'score': 1.23}, {'connected_gene': 'GC06M151579', 'score': 0.18}]
chr6	GH06I151450	151450801	151453801	2.12	[{'connected_gene': 'RMND1', 'score': 566.61}, {'connected_gene': 'ARMT1', 'score': 550.77}, {'connected_gene': 'HSPA8P15', 'score': 25.76}, {'connected_gene': 'ZBTB2', 'score': 23.69}, {'connected_gene': 'CCDC170', 'score': 0.26}]
chr6	GH06I151444	151444710	151447624	0.91	[{'connected_gene': 'RMND1', 'score': 16.09}, {'connected_gene': 'ZBTB2', 'score': 11.16}, {'connected_gene': 'CCDC170', 'score': 5.94}, {'connected_gene': 'HSPA8P15', 'score': 0.29}]
chr6	GH06I151385	151385266	151385455	0.72	[{'connected_gene': 'RMND1', 'score': 8.82}, {'connected_gene': 'ZBTB2', 'score': 0.44}, {'connected_gene': 'GC06M151379', 'score': 0.44}, {'connected_gene': 'ENSG00000252615', 'score': 0.44}]
chr6	GH06I151334	151334800	151335575	0.89	[{'connected_gene': 'RMND1', 'score': 5.92}, {'connected_gene': 'PIR45449', 'score': 0.37}, {'connected_gene': 'RN7SKP268', 'score': 0.37}, {'connected_gene': 'GC06P151355', 'score': 0.37}, {'connected_gene': 'AKAP12', 'score': 0.15}]
chr6	GH06I151436	151436209	151438591	1.5	[{'connected_gene': 'RMND1', 'score': 568.96}, {'connected_gene': 'HSPA8P15', 'score': 0.34}]
chr6	GH06I151409	151409434	151409618	0.34	[{'connected_gene': 'HSPA8P15', 'score': 0.77}, {'connected_gene': 'ZBTB2', 'score': 0.37}, {'connected_gene': 'RMND1', 'score': 0.26}]
chr6	GH06I151413	151413643	151414495	0.43	[{'connected_gene': 'HSPA8P15', 'score': 562.64}, {'connected_gene': 'RMND1', 'score': 27.03}, {'connected_gene': 'ZBTB2', 'score': 12.34}, {'connected_gene': 'ARMT1', 'score': 11.61}]