PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000309922	[[101280705, 101280847], [101283613, 101285290]]	[[101283625, 101284837]]
ENST00000495642	[[101280884, 101280953], [101283613, 101284561]]	[[101283625, 101284561]]
NM_017819	[[101280679, 101280847], [101283613, 101285290]]	[[101283625, 101284837]]

Promoter

Chrom	Start	End	Description
chr3	101280677	101280754	CAGE_peak_1_at_RG9MTD1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I101529	101529317	101533588	1.17	[{'connected_gene': 'SENP7', 'score': 16.37}, {'connected_gene': 'TRMT10C', 'score': 12.38}, {'connected_gene': 'IMPG2', 'score': 7.32}, {'connected_gene': 'PDCL3P4', 'score': 6.57}, {'connected_gene': 'FAM172BP', 'score': 0.39}]
chr3	GH03I101560	101560917	101563207	2.03	[{'connected_gene': 'TRMT10C', 'score': 550.77}, {'connected_gene': 'SENP7', 'score': 24.84}, {'connected_gene': 'NXPE3', 'score': 12.77}, {'connected_gene': 'RPL24', 'score': 10.09}, {'connected_gene': 'ZBTB11-AS1', 'score': 9.68}, {'connected_gene': 'IMPG2', 'score': 5.85}, {'connected_gene': 'PDCL3P4', 'score': 5.1}, {'connected_gene': 'PCNP', 'score': 0.39}]
chr3	GH03I101519	101519837	101522362	1.14	[{'connected_gene': 'TRMT10C', 'score': 11.97}, {'connected_gene': 'SENP7', 'score': 7.07}, {'connected_gene': 'FAM172BP', 'score': 0.77}]
chr3	GH03I101559	101559602	101559999	0.31	[{'connected_gene': 'TRMT10C', 'score': 0.77}, {'connected_gene': 'FAM172BP', 'score': 0.26}]
chr3	GH03I101683	101683221	101688387	2.37	[{'connected_gene': 'RPL24', 'score': 574.35}, {'connected_gene': 'LOC105374013', 'score': 550.77}, {'connected_gene': 'GC03P101686', 'score': 550.77}, {'connected_gene': 'ZBTB11-AS1', 'score': 42.56}, {'connected_gene': 'SENP7', 'score': 34.15}, {'connected_gene': 'RPS18P5', 'score': 26.94}, {'connected_gene': 'ZNF90P1', 'score': 19.03}, {'connected_gene': 'ZBTB11', 'score': 16.4}, {'connected_gene': 'TFG', 'score': 10.71}, {'connected_gene': 'PDCL3P4', 'score': 10.62}, {'connected_gene': 'NXPE3', 'score': 10.2}, {'connected_gene': 'PCNP', 'score': 2.81}, {'connected_gene': 'TRMT10C', 'score': 1.36}, {'connected_gene': 'NFKBIZ', 'score': 1.32}]
chr3	GH03I101517	101517999	101519443	1	[{'connected_gene': 'FAM172BP', 'score': 550.77}, {'connected_gene': 'SENP7', 'score': 16.66}, {'connected_gene': 'TRMT10C', 'score': 11.97}, {'connected_gene': 'ZBTB11-AS1', 'score': 10.52}]
chr3	GH03I101630	101630525	101631334	0.2	[{'connected_gene': 'PIR53925', 'score': 550.77}, {'connected_gene': 'NXPE3', 'score': 17.58}, {'connected_gene': 'ZBTB11-AS1', 'score': 11.12}, {'connected_gene': 'TRMT10C', 'score': 10.84}, {'connected_gene': 'RPL24', 'score': 10.57}, {'connected_gene': 'ENSG00000212319', 'score': 0.77}, {'connected_gene': 'GC03M101629', 'score': 0.77}]
chr3	GH03I101629	101629140	101629655	0.56	[{'connected_gene': 'ENSG00000212319', 'score': 550.77}, {'connected_gene': 'GC03M101629', 'score': 550.77}, {'connected_gene': 'ZBTB11-AS1', 'score': 11.37}, {'connected_gene': 'ZBTB11', 'score': 11.37}, {'connected_gene': 'RPL24', 'score': 11.35}, {'connected_gene': 'TRMT10C', 'score': 11.22}, {'connected_gene': 'PIR53925', 'score': 0.77}]