PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000377208	[[79172496, 79176686], [79177338, 79177673]]	[[79175549, 79176686], [79177338, 79177461]]
NM_006237	[[79173226, 79176686], [79177338, 79177695]]	[[79175549, 79176686], [79177338, 79177461]]

Promoter

Chrom	Start	End	Description
chr13	79177629	79177636	CAGE_peak_4_at_POU4F1_5end
chr13	79177674	79177701	CAGE_peak_1_at_POU4F1_5end
chr13	79177703	79177729	CAGE_peak_2_at_POU4F1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I078657	78657707	78660679	2.02	[{'connected_gene': 'RNF219', 'score': 550.77}, {'connected_gene': 'RBM26', 'score': 11.89}, {'connected_gene': 'ENSG00000271776', 'score': 11.79}, {'connected_gene': 'POU4F1', 'score': 7.96}, {'connected_gene': 'GC13P078744', 'score': 0.17}]
chr13	GH13I078646	78646177	78648141	0.95	[{'connected_gene': 'POU4F1', 'score': 11.12}, {'connected_gene': 'ENSG00000271776', 'score': 10.2}, {'connected_gene': 'GC13P078650', 'score': 0.77}, {'connected_gene': 'GC13M078632', 'score': 0.44}, {'connected_gene': 'RNF219', 'score': 0.39}]
chr13	GH13I078601	78601013	78604007	1.6	[{'connected_gene': 'POU4F1', 'score': 559.41}, {'connected_gene': 'RBM26', 'score': 17.83}, {'connected_gene': 'ENSG00000271776', 'score': 9.74}, {'connected_gene': 'GC13M078596', 'score': 0.77}, {'connected_gene': 'GC13M078602', 'score': 0.39}, {'connected_gene': 'RNF219-AS1', 'score': 0.03}]
chr13	GH13I078129	78129081	78134391	0.57	[{'connected_gene': 'POU4F1', 'score': 10.92}, {'connected_gene': 'EDNRB', 'score': 10.8}, {'connected_gene': 'GC13M078137', 'score': 0.44}, {'connected_gene': 'PIR49322', 'score': 0.22}, {'connected_gene': 'RNF219-AS1', 'score': 0.08}]
chr13	GH13I078608	78608801	78609916	0.96	[{'connected_gene': 'ENSG00000271776', 'score': 9.94}, {'connected_gene': 'POU4F1', 'score': 0.44}, {'connected_gene': 'GC13M078602', 'score': 0.44}, {'connected_gene': 'RNF219-AS1', 'score': 0.03}]