PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000325636	[[114262164, 114262387], [114270710, 114271139]]	[[114262286, 114262387], [114270710, 114271053]]
NM_019021	[[114262169, 114262387], [114270710, 114271272]]	[[114262286, 114262387], [114270710, 114271053]]
NM_001271562	[[114269253, 114271272]]	[[114270681, 114271053]]

Promoter

Chrom	Start	End	Description
chr11	114271087	114271099	CAGE_peak_2_at_C11orf71_5end
chr11	114271167	114271247	CAGE_peak_1_at_C11orf71_5end
chr11	114271248	114271255	CAGE_peak_6_at_C11orf71_5end
chr11	114271257	114271266	CAGE_peak_4_at_C11orf71_5end
chr11	114271270	114271279	CAGE_peak_5_at_C11orf71_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I114288	114288922	114301986	2.38	[{'connected_gene': 'NNMT', 'score': 570.44}, {'connected_gene': 'LOC101928940', 'score': 11.11}, {'connected_gene': 'RBM7', 'score': 10.54}, {'connected_gene': 'C11orf71', 'score': 10.53}, {'connected_gene': 'ENSG00000255663', 'score': 10.53}, {'connected_gene': 'ZW10', 'score': 5.91}, {'connected_gene': 'GC11P114306', 'score': 0.39}, {'connected_gene': 'GC11M114263', 'score': 0.29}, {'connected_gene': 'ENSG00000256947', 'score': 0.21}]
chr11	GH11I114348	114348046	114349585	0.76	[{'connected_gene': 'REXO2', 'score': 12.11}, {'connected_gene': 'LOC101928940', 'score': 11.76}, {'connected_gene': 'RBM7', 'score': 11.17}, {'connected_gene': 'ENSG00000255663', 'score': 11.17}, {'connected_gene': 'C11orf71', 'score': 11.17}, {'connected_gene': 'ENSG00000256947', 'score': 0.44}, {'connected_gene': 'GC11P114340', 'score': 0.44}]
chr11	GH11I114353	114353699	114354586	0.95	[{'connected_gene': 'LOC101928940', 'score': 11.78}, {'connected_gene': 'ENSG00000270179', 'score': 11.41}, {'connected_gene': 'RBM7', 'score': 11.18}, {'connected_gene': 'ENSG00000255663', 'score': 11.18}, {'connected_gene': 'C11orf71', 'score': 11.18}, {'connected_gene': 'ENSG00000256947', 'score': 0.77}, {'connected_gene': 'GC11P114340', 'score': 0.39}]
chr11	GH11I114377	114377337	114378767	0.46	[{'connected_gene': 'LOC101928940', 'score': 550.77}, {'connected_gene': 'RBM7', 'score': 17.15}, {'connected_gene': 'ENSG00000255663', 'score': 11.76}, {'connected_gene': 'C11orf71', 'score': 11.76}, {'connected_gene': 'ENSG00000256947', 'score': 0.34}]
chr11	GH11I114346	114346601	114347200	0.43	[{'connected_gene': 'RBM7', 'score': 11.09}, {'connected_gene': 'ENSG00000255663', 'score': 11.09}, {'connected_gene': 'C11orf71', 'score': 11.09}, {'connected_gene': 'LOC101928940', 'score': 10.93}, {'connected_gene': 'REXO2', 'score': 4.86}, {'connected_gene': 'ENSG00000256947', 'score': 0.44}, {'connected_gene': 'GC11P114340', 'score': 0.44}]
chr11	GH11I114447	114447200	114449004	0.66	[{'connected_gene': 'RBM7', 'score': 10.87}, {'connected_gene': 'ENSG00000255663', 'score': 10.87}, {'connected_gene': 'C11orf71', 'score': 10.87}, {'connected_gene': 'LOC101928940', 'score': 10.59}, {'connected_gene': 'LOC100422382', 'score': 0.77}, {'connected_gene': 'REXO2', 'score': 0.44}]
chr11	GH11I114365	114365463	114368237	0.63	[{'connected_gene': 'RBM7', 'score': 16.46}, {'connected_gene': 'ENSG00000255663', 'score': 11.13}, {'connected_gene': 'C11orf71', 'score': 11.13}, {'connected_gene': 'ENSG00000270179', 'score': 5.11}, {'connected_gene': 'LOC101928940', 'score': 0.39}, {'connected_gene': 'ENSG00000256947', 'score': 0.39}]
chr11	GH11I114398	114398528	114402362	2.29	[{'connected_gene': 'RBM7', 'score': 566.33}, {'connected_gene': 'ENSG00000255663', 'score': 550.77}, {'connected_gene': 'C11orf71', 'score': 550.77}]
chr11	GH11I114304	114304194	114305431	0.43	[{'connected_gene': 'GC11P114306', 'score': 550.77}, {'connected_gene': 'NNMT', 'score': 14.99}, {'connected_gene': 'RBM7', 'score': 10.54}, {'connected_gene': 'ENSG00000255663', 'score': 10.54}, {'connected_gene': 'C11orf71', 'score': 10.54}, {'connected_gene': 'GC11M114263', 'score': 0.26}, {'connected_gene': 'ENSG00000256947', 'score': 0.23}]