PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000378789	[[7863627, 7864310], [7866167, 7866237], [7866352, 7866511], [7875779, 7875871], [7886800, 7886976], [7894810, 7895066], [7915130, 7915282], [7920932, 7921121]]	[[7864239, 7864310], [7866167, 7866237], [7866352, 7866511], [7875779, 7875871], [7886800, 7886976], [7894810, 7895066], [7915130, 7915282], [7920932, 7921069]]
NM_017545	[[7863630, 7864310], [7866167, 7866237], [7866352, 7866511], [7875779, 7875871], [7886800, 7886976], [7894810, 7895066], [7915130, 7915282], [7920932, 7921093]]	[[7864239, 7864310], [7866167, 7866237], [7866352, 7866511], [7875779, 7875871], [7886800, 7886976], [7894810, 7895066], [7915130, 7915282], [7920932, 7921069]]

Promoter

Chrom	Start	End	Description
chr20	7921090	7921115	CAGE_peak_1_at_HAO1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr20	GH20I007924	7924354	7925724	0.86	[{'connected_gene': 'TMX4', 'score': 5.58}, {'connected_gene': 'HAO1', 'score': 1.48}, {'connected_gene': 'ENSG00000277315', 'score': 0.22}]
chr20	GH20I007936	7936201	7936846	0.93	[{'connected_gene': 'HAO1', 'score': 0.77}, {'connected_gene': 'ENSG00000277315', 'score': 0.2}]
chr20	GH20I007911	7911550	7913119	0.2	[{'connected_gene': 'HAO1', 'score': 0.31}, {'connected_gene': 'ENSG00000277315', 'score': 0.25}]
chr20	GH20I007940	7940448	7940507	0.9	[{'connected_gene': 'HAO1', 'score': 550.77}, {'connected_gene': 'GC20P007955', 'score': 0.39}]
chr20	GH20I007935	7935201	7935400	0.57	[{'connected_gene': 'HAO1', 'score': 0.44}, {'connected_gene': 'ENSG00000277315', 'score': 0.2}]