PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000340700	[[88649112, 88652499], [88654310, 88654453], [88658567, 88658754], [88693718, 88693879], [88707046, 88707164], [88729545, 88729895], [88792762, 88793251]]	[[88651878, 88652499], [88654310, 88654453], [88658567, 88658754], [88693718, 88693879], [88707046, 88707164], [88729545, 88729895], [88792762, 88792799]]
ENST00000312350	[[88651236, 88652499], [88654310, 88654453], [88658567, 88658754], [88693718, 88693879], [88707046, 88707164], [88729545, 88729895], [88737081, 88737255]]	[[88651878, 88652499], [88654310, 88654453], [88658567, 88658754], [88693718, 88693879], [88707046, 88707164], [88729545, 88729895], [88737081, 88737133]]
ENST00000319231	[[88651236, 88652499], [88654310, 88654453], [88658567, 88658754], [88693718, 88693879], [88707046, 88707164], [88729545, 88729895], [88789090, 88789593]]	[[88651878, 88652499], [88654310, 88654453], [88658567, 88658754], [88693718, 88693879], [88707046, 88707164], [88729545, 88729895], [88789090, 88789142]]
ENST00000556282	[[88707045, 88707164], [88729545, 88729895], [88789990, 88790069]]	[[88707045, 88707164], [88729545, 88729895], [88789990, 88789991]]
NM_138318	[[88646451, 88652499], [88654310, 88654453], [88658567, 88658754], [88693718, 88693879], [88707046, 88707164], [88729545, 88729895], [88737081, 88737255]]	[[88651878, 88652499], [88654310, 88654453], [88658567, 88658754], [88693718, 88693879], [88707046, 88707164], [88729545, 88729895], [88737081, 88737133]]
NM_138317	[[88646451, 88652499], [88654310, 88654453], [88658567, 88658754], [88693718, 88693879], [88707046, 88707164], [88729545, 88729895], [88789090, 88789593]]	[[88651878, 88652499], [88654310, 88654453], [88658567, 88658754], [88693718, 88693879], [88707046, 88707164], [88729545, 88729895], [88789090, 88789142]]
NM_021161	[[88646451, 88652499], [88654310, 88654453], [88658567, 88658754], [88693718, 88693879], [88707046, 88707164], [88729545, 88729895], [88792762, 88793256]]	[[88651878, 88652499], [88654310, 88654453], [88658567, 88658754], [88693718, 88693879], [88707046, 88707164], [88729545, 88729895], [88792762, 88792799]]

Promoter

Chrom	Start	End	Description
chr14	88789549	88789577	CAGE_peak_1_at_KCNK10_5end
chr14	88789581	88789603	CAGE_peak_3_at_KCNK10_5end
chr14	88789604	88789628	CAGE_peak_2_at_KCNK10_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I088306	88306192	88306209	0.22	[{'connected_gene': 'SPATA7', 'score': 10.86}, {'connected_gene': 'KCNK10', 'score': 2.78}, {'connected_gene': 'PIR46896', 'score': 0.13}]
chr14	GH14I088364	88364018	88366269	0.54	[{'connected_gene': 'SPATA7', 'score': 17.09}, {'connected_gene': 'KCNK10', 'score': 0.28}]
chr14	GH14I087869	87869194	87870662	0.94	[{'connected_gene': 'KCNK10', 'score': 2.22}, {'connected_gene': 'GPR65', 'score': 1.36}, {'connected_gene': 'ENSG00000258807', 'score': 0.77}, {'connected_gene': 'ENSG00000259077', 'score': 0.22}, {'connected_gene': 'GALC', 'score': 0.13}]
chr14	GH14I088322	88322092	88322130	0.44	[{'connected_gene': 'KCNK10', 'score': 7.0}, {'connected_gene': 'SPATA7', 'score': 2.21}, {'connected_gene': 'PIR46896', 'score': 0.12}]
chr14	GH14I088326	88326921	88326980	0.84	[{'connected_gene': 'KCNK10', 'score': 550.77}, {'connected_gene': 'SPATA7', 'score': 0.22}]
chr14	GH14I087901	87901193	87901611	0.22	[{'connected_gene': 'KCNK10', 'score': 1.27}, {'connected_gene': 'ENSG00000258807', 'score': 0.31}, {'connected_gene': 'FAM35CP', 'score': 0.23}, {'connected_gene': 'GALC', 'score': 0.16}]
chr14	GH14I088325	88322737	88322886	0.49	[{'connected_gene': 'KCNK10', 'score': 0.77}, {'connected_gene': 'PIR46896', 'score': 0.12}]
chr14	GH14I088324	88323259	88323318	0.87	[{'connected_gene': 'KCNK10', 'score': 550.77}, {'connected_gene': 'PIR46896', 'score': 0.12}]
chr14	GH14I088269	88269707	88271529	0.88	[{'connected_gene': 'KCNK10', 'score': 556.39}, {'connected_gene': 'PIR46896', 'score': 0.18}]
chr14	GH14I088323	88323400	88323866	1.07	[{'connected_gene': 'KCNK10', 'score': 0.77}, {'connected_gene': 'PIR46896', 'score': 0.12}]
chr14	GH14I088245	88245377	88245526	0.81	[{'connected_gene': 'PIR46896', 'score': 0.22}, {'connected_gene': 'KCNK10', 'score': 0.18}]
chr14	GH14I088202	88202377	88202526	0.31	[{'connected_gene': 'PIR46896', 'score': 0.37}, {'connected_gene': 'KCNK10', 'score': 0.13}]
chr14	GH14I088188	88188911	88190489	1.01	[{'connected_gene': 'PIR46896', 'score': 0.77}, {'connected_gene': 'KCNK10', 'score': 0.12}]
chr14	GH14I088248	88248697	88248846	0.49	[{'connected_gene': 'PIR46896', 'score': 0.21}, {'connected_gene': 'KCNK10', 'score': 0.18}]
chr14	GH14I088234	88234057	88234206	0.46	[{'connected_gene': 'PIR46896', 'score': 0.25}, {'connected_gene': 'KCNK10', 'score': 0.16}]
chr14	GH14I088063	88063879	88067116	0.78	[{'connected_gene': 'GC14P088067', 'score': 550.77}, {'connected_gene': 'GALC', 'score': 26.56}, {'connected_gene': 'GPR65', 'score': 7.16}, {'connected_gene': 'KCNK10', 'score': 1.24}, {'connected_gene': 'LOC101928791', 'score': 0.31}, {'connected_gene': 'LINC01146', 'score': 0.26}]