PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000541292	[[137143717, 137143933], [137146351, 137146409], [137147456, 137147607], [137166752, 137166830], [137167210, 137167319], [137187764, 137187871], [137191027, 137191141], [137191869, 137191977], [137193335, 137193391], [137219279, 137219379], [137234595, 137235037]]	[[137143803, 137143933], [137146351, 137146409], [137147456, 137147607], [137166752, 137166830], [137167210, 137167319], [137187764, 137187871], [137191027, 137191141], [137191869, 137191965]]
ENST00000318471	[[137143722, 137143933], [137146351, 137146409], [137147456, 137147607], [137166752, 137166830], [137167210, 137167319], [137187764, 137187871], [137191027, 137191141], [137193335, 137193391], [137219279, 137219379], [137234595, 137235075]]	[[137143803, 137143933], [137146351, 137146409], [137147456, 137147607], [137166752, 137166830], [137167210, 137167319], [137187764, 137187871], [137191027, 137191141], [137193335, 137193391], [137219279, 137219379], [137234595, 137234664]]
ENST00000367756	[[137143716, 137143933], [137146351, 137146409], [137147456, 137147607], [137151144, 137151398]]	[[137143803, 137143933], [137146351, 137146409], [137147456, 137147607], [137151144, 137151174]]
NM_000288	[[137143701, 137143933], [137146351, 137146409], [137147456, 137147607], [137166752, 137166830], [137167210, 137167319], [137187764, 137187871], [137191027, 137191141], [137193335, 137193391], [137219279, 137219379], [137234595, 137235072]]	[[137143803, 137143933], [137146351, 137146409], [137147456, 137147607], [137166752, 137166830], [137167210, 137167319], [137187764, 137187871], [137191027, 137191141], [137193335, 137193391], [137219279, 137219379], [137234595, 137234664]]

Promoter

Chrom	Start	End	Description
chr6	137143694	137143755	CAGE_peak_1_at_PEX7_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I136760	136760035	136769197	1.55	[{'connected_gene': 'BCLAF1', 'score': 27.34}, {'connected_gene': 'PEX7', 'score': 26.39}, {'connected_gene': 'MAP3K5', 'score': 14.83}, {'connected_gene': 'LOC101928461', 'score': 10.29}, {'connected_gene': 'RNA5SP219', 'score': 10.29}, {'connected_gene': 'LOC101928429', 'score': 0.37}]
chr6	GH06I136735	136735542	136740579	0.9	[{'connected_gene': 'BCLAF1', 'score': 29.9}, {'connected_gene': 'PEX7', 'score': 13.17}, {'connected_gene': 'MAP3K5', 'score': 13.02}, {'connected_gene': 'RNA5SP219', 'score': 11.46}, {'connected_gene': 'LOC101928461', 'score': 11.46}, {'connected_gene': 'LOC101928429', 'score': 0.25}]
chr6	GH06I136749	136749503	136754535	1.22	[{'connected_gene': 'BCLAF1', 'score': 14.08}, {'connected_gene': 'PEX7', 'score': 12.73}, {'connected_gene': 'LOC101928429', 'score': 0.29}, {'connected_gene': 'MAP3K5', 'score': 0.26}, {'connected_gene': 'RNA5SP219', 'score': 0.13}]
chr6	GH06I136719	136719401	136721139	0.95	[{'connected_gene': 'BCLAF1', 'score': 18.9}, {'connected_gene': 'MAP3K5', 'score': 12.32}, {'connected_gene': 'PEX7', 'score': 10.62}, {'connected_gene': 'LOC101928429', 'score': 0.21}, {'connected_gene': 'RNA5SP219', 'score': 0.16}]
chr6	GH06I136608	136607343	136607492	0.9	[{'connected_gene': 'BCLAF1', 'score': 34.42}, {'connected_gene': 'RNA5SP219', 'score': 13.0}, {'connected_gene': 'LOC101928461', 'score': 13.0}, {'connected_gene': 'MAP3K5', 'score': 11.86}, {'connected_gene': 'PEX7', 'score': 10.48}, {'connected_gene': 'MAP7', 'score': 0.22}]
chr6	GH06I136770	136770919	136776028	1.38	[{'connected_gene': 'PEX7', 'score': 27.32}, {'connected_gene': 'BCLAF1', 'score': 12.23}, {'connected_gene': 'RNA5SP219', 'score': 10.28}, {'connected_gene': 'LOC101928461', 'score': 10.28}, {'connected_gene': 'LOC101928429', 'score': 0.39}, {'connected_gene': 'MAP3K5', 'score': 0.37}]
chr6	GH06I136821	136821800	136823560	1.98	[{'connected_gene': 'PEX7', 'score': 569.04}, {'connected_gene': 'BCLAF1', 'score': 21.66}, {'connected_gene': 'GC06M136857', 'score': 0.29}, {'connected_gene': 'ENSG00000201807', 'score': 0.29}]
chr6	GH06I136716	136716002	136718178	0.89	[{'connected_gene': 'PEX7', 'score': 13.17}, {'connected_gene': 'MAP3K5', 'score': 12.31}, {'connected_gene': 'LOC101928429', 'score': 0.2}, {'connected_gene': 'RNA5SP219', 'score': 0.17}]
chr6	GH06I136696	136696323	136697343	0.46	[{'connected_gene': 'PEX7', 'score': 19.37}, {'connected_gene': 'MAP3K5', 'score': 13.01}, {'connected_gene': 'RNA5SP219', 'score': 11.74}, {'connected_gene': 'LOC101928461', 'score': 11.74}, {'connected_gene': 'LOC101928429', 'score': 0.17}]
chr6	GH06I136723	136723903	136724112	0.64	[{'connected_gene': 'PEX7', 'score': 23.03}, {'connected_gene': 'MAP3K5', 'score': 11.36}, {'connected_gene': 'RNA5SP219', 'score': 10.83}, {'connected_gene': 'LOC101928461', 'score': 10.83}, {'connected_gene': 'LOC101928429', 'score': 0.21}]
chr6	GH06I136820	136820703	136820852	0.2	[{'connected_gene': 'PEX7', 'score': 568.92}, {'connected_gene': 'MAP3K5', 'score': 0.31}]
chr6	GH06I136781	136781201	136781400	0.51	[{'connected_gene': 'PEX7', 'score': 16.96}, {'connected_gene': 'LOC101928429', 'score': 0.77}, {'connected_gene': 'MAP3K5', 'score': 0.39}, {'connected_gene': 'RNA5SP219', 'score': 0.1}]
chr6	GH06I136756	136756202	136757999	1.09	[{'connected_gene': 'PEX7', 'score': 10.07}, {'connected_gene': 'LOC101928429', 'score': 0.31}, {'connected_gene': 'MAP3K5', 'score': 0.28}, {'connected_gene': 'RNA5SP219', 'score': 0.13}]
chr6	GH06I136730	136730136	136731734	0.63	[{'connected_gene': 'PEX7', 'score': 12.88}, {'connected_gene': 'RNA5SP219', 'score': 10.32}, {'connected_gene': 'LOC101928461', 'score': 10.32}, {'connected_gene': 'LOC101928429', 'score': 0.23}, {'connected_gene': 'MAP3K5', 'score': 0.21}]
chr6	GH06I136860	136860100	136860433	0.22	[{'connected_gene': 'PEX7', 'score': 12.5}, {'connected_gene': 'RNA5SP219', 'score': 10.72}, {'connected_gene': 'LOC101928461', 'score': 10.72}, {'connected_gene': 'GC06M136857', 'score': 0.77}, {'connected_gene': 'ENSG00000201807', 'score': 0.77}, {'connected_gene': 'GC06M136860', 'score': 0.44}]
chr6	GH06I136700	136700243	136700392	0.64	[{'connected_gene': 'PEX7', 'score': 20.0}, {'connected_gene': 'RNA5SP219', 'score': 0.19}, {'connected_gene': 'LOC101928429', 'score': 0.18}, {'connected_gene': 'MAP3K5', 'score': 0.16}]
chr6	GH06I136782	136781763	136793891	2.51	[{'connected_gene': 'MAP3K5', 'score': 556.72}, {'connected_gene': 'BCLAF1', 'score': 36.69}, {'connected_gene': 'PEX7', 'score': 17.01}, {'connected_gene': 'MTFR2', 'score': 9.79}, {'connected_gene': 'IFNGR1', 'score': 7.39}, {'connected_gene': 'LOC101928429', 'score': 0.77}]
chr6	GH06I136718	136718201	136718400	0.31	[{'connected_gene': 'MAP3K5', 'score': 12.32}, {'connected_gene': 'PEX7', 'score': 10.14}, {'connected_gene': 'LOC101928429', 'score': 0.2}, {'connected_gene': 'RNA5SP219', 'score': 0.17}]
chr6	GH06I136643	136643723	136644871	1.37	[{'connected_gene': 'MAP3K5', 'score': 12.14}, {'connected_gene': 'PEX7', 'score': 11.28}, {'connected_gene': 'RNA5SP219', 'score': 0.39}, {'connected_gene': 'LOC101928461', 'score': 0.37}, {'connected_gene': 'LOC101928429', 'score': 0.12}]
chr6	GH06I136646	136646358	136648918	0.92	[{'connected_gene': 'MAP3K5', 'score': 12.45}, {'connected_gene': 'PEX7', 'score': 11.35}, {'connected_gene': 'RNA5SP219', 'score': 0.37}, {'connected_gene': 'LOC101928461', 'score': 0.37}, {'connected_gene': 'LOC101928429', 'score': 0.12}]
chr6	GH06I136640	136640663	136640812	0.2	[{'connected_gene': 'MAP3K5', 'score': 12.13}, {'connected_gene': 'PEX7', 'score': 11.27}, {'connected_gene': 'RNA5SP219', 'score': 0.39}, {'connected_gene': 'LOC101928461', 'score': 0.39}, {'connected_gene': 'LOC101928429', 'score': 0.11}]
chr6	GH06I136920	136920755	136924140	1.76	[{'connected_gene': 'SLC35D3', 'score': 569.98}, {'connected_gene': 'GC06M136918', 'score': 550.77}, {'connected_gene': 'BCLAF1', 'score': 17.96}, {'connected_gene': 'PEX7', 'score': 5.86}, {'connected_gene': 'IL20RA', 'score': 4.16}, {'connected_gene': 'ENSG00000207247', 'score': 0.39}]
chr6	GH06I136604	136604413	136605388	0.49	[{'connected_gene': 'LOC101928461', 'score': 13.0}, {'connected_gene': 'RNA5SP219', 'score': 12.97}, {'connected_gene': 'BCLAF1', 'score': 12.33}, {'connected_gene': 'MAP3K5', 'score': 11.86}, {'connected_gene': 'PEX7', 'score': 10.48}, {'connected_gene': 'MAP7', 'score': 0.23}]
chr6	GH06I136607	136607961	136612094	1.19	[{'connected_gene': 'RNA5SP219', 'score': 13.0}, {'connected_gene': 'MAP3K5', 'score': 11.87}, {'connected_gene': 'PEX7', 'score': 10.48}, {'connected_gene': 'LOC101928461', 'score': 0.37}, {'connected_gene': 'MAP7', 'score': 0.22}]
chr6	GH06I136668	136668843	136669728	0.72	[{'connected_gene': 'RNA5SP219', 'score': 11.99}, {'connected_gene': 'LOC101928461', 'score': 11.97}, {'connected_gene': 'PEX7', 'score': 10.23}, {'connected_gene': 'LOC101928429', 'score': 0.14}, {'connected_gene': 'MAP3K5', 'score': 0.13}]
chr6	GH06I136606	136606483	136606716	0.33	[{'connected_gene': 'RNA5SP219', 'score': 13.0}, {'connected_gene': 'LOC101928461', 'score': 13.0}, {'connected_gene': 'MAP3K5', 'score': 11.86}, {'connected_gene': 'PEX7', 'score': 10.48}, {'connected_gene': 'MAP7', 'score': 0.22}]
chr6	GH06I136840	136840763	136840912	0.2	[{'connected_gene': 'GC06M136857', 'score': 0.39}, {'connected_gene': 'ENSG00000201807', 'score': 0.39}, {'connected_gene': 'PEX7', 'score': 0.37}]