PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr14	60632021	60632035	CAGE_peak_3_at_DHRS7_5end
chr14	60632043	60632073	CAGE_peak_2_at_DHRS7_5end
chr14	60632081	60632143	CAGE_peak_1_at_DHRS7_5end
chr14	60632162	60632178	CAGE_peak_4_at_DHRS7_5end
chr14	60636500	60636512	CAGE_peak_8_at_DHRS7_5end
chr14	60636590	60636597	CAGE_peak_11_at_DHRS7_5end
chr14	60636598	60636610	CAGE_peak_6_at_DHRS7_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I060090	60090603	60096835	2.49	[{'connected_gene': 'PCNX4', 'score': 563.62}, {'connected_gene': 'LOC105370524', 'score': 550.77}, {'connected_gene': 'DHRS7', 'score': 15.49}, {'connected_gene': 'L3HYPDH', 'score': 14.06}, {'connected_gene': 'SCOCP1', 'score': 11.52}, {'connected_gene': 'TRMT5', 'score': 11.15}, {'connected_gene': 'GC14P060140', 'score': 0.25}]
chr14	GH14I060153	60153614	60155258	0.6	[{'connected_gene': 'PCNX4', 'score': 11.08}, {'connected_gene': 'LOC101927702', 'score': 10.31}, {'connected_gene': 'PPM1A', 'score': 10.31}, {'connected_gene': 'SCOCP1', 'score': 0.77}, {'connected_gene': 'GC14P060159', 'score': 0.77}, {'connected_gene': 'GC14P060140', 'score': 0.39}, {'connected_gene': 'DHRS7', 'score': 0.37}]
chr14	GH14I060150	60150794	60153210	1.38	[{'connected_gene': 'DHRS7', 'score': 22.61}, {'connected_gene': 'PCNX4', 'score': 11.98}, {'connected_gene': 'RTN1', 'score': 7.23}, {'connected_gene': 'PPM1A', 'score': 2.36}, {'connected_gene': 'SCOCP1', 'score': 0.44}, {'connected_gene': 'GC14P060159', 'score': 0.44}, {'connected_gene': 'GC14P060140', 'score': 0.39}]
chr14	GH14I060155	60155367	60156704	0.31	[{'connected_gene': 'DHRS7', 'score': 21.98}, {'connected_gene': 'PCNX4', 'score': 11.08}, {'connected_gene': 'PPM1A', 'score': 10.32}, {'connected_gene': 'LOC101927702', 'score': 10.31}, {'connected_gene': 'CCDC175', 'score': 6.74}, {'connected_gene': 'SCOCP1', 'score': 0.77}, {'connected_gene': 'GC14P060159', 'score': 0.77}, {'connected_gene': 'GC14P060140', 'score': 0.37}]
chr14	GH14I060163	60163782	60167006	2.18	[{'connected_gene': 'DHRS7', 'score': 573.26}, {'connected_gene': 'PCNX4', 'score': 11.55}, {'connected_gene': 'SCOCP1', 'score': 0.44}, {'connected_gene': 'GC14P060159', 'score': 0.44}]
chr14	GH14I060174	60174263	60176232	0.54	[{'connected_gene': 'DHRS7', 'score': 22.02}, {'connected_gene': 'PCNX4', 'score': 10.78}, {'connected_gene': 'LOC101927702', 'score': 10.34}, {'connected_gene': 'PPM1A', 'score': 10.34}, {'connected_gene': 'PSMA3P', 'score': 0.77}]
chr14	GH14I060105	60105829	60107400	0.6	[{'connected_gene': 'DHRS7', 'score': 15.08}, {'connected_gene': 'PCNX4', 'score': 0.39}, {'connected_gene': 'GC14P060140', 'score': 0.29}]
chr14	GH14I060101	60101923	60103333	0.63	[{'connected_gene': 'DHRS7', 'score': 15.07}, {'connected_gene': 'PCNX4', 'score': 0.39}, {'connected_gene': 'GC14P060140', 'score': 0.28}]
chr14	GH14I060002	60002459	60003919	0.43	[{'connected_gene': 'DHRS7', 'score': 15.23}, {'connected_gene': 'ENSG00000261120', 'score': 0.18}, {'connected_gene': 'LRRC9', 'score': 0.18}, {'connected_gene': 'LOC105370524', 'score': 0.17}]
chr14	GH14I059997	59997299	59998960	0.38	[{'connected_gene': 'DHRS7', 'score': 15.33}, {'connected_gene': 'ENSG00000261120', 'score': 0.18}, {'connected_gene': 'LRRC9', 'score': 0.18}, {'connected_gene': 'LOC105370524', 'score': 0.16}]
chr14	GH14I060161	60161213	60162599	1.26	[{'connected_gene': 'DHRS7', 'score': 22.02}, {'connected_gene': 'SCOCP1', 'score': 0.77}, {'connected_gene': 'GC14P060159', 'score': 0.77}, {'connected_gene': 'PCNX4', 'score': 0.19}]
chr14	GH14I060158	60158320	60160195	0.2	[{'connected_gene': 'SCOCP1', 'score': 550.77}, {'connected_gene': 'GC14P060159', 'score': 550.77}, {'connected_gene': 'DHRS7', 'score': 21.98}, {'connected_gene': 'PCNX4', 'score': 11.49}, {'connected_gene': 'LOC101927702', 'score': 10.32}, {'connected_gene': 'PPM1A', 'score': 10.32}]
chr14	GH14I060160	60160601	60161000	0.4	[{'connected_gene': 'SCOCP1', 'score': 550.77}, {'connected_gene': 'GC14P060159', 'score': 550.77}, {'connected_gene': 'DHRS7', 'score': 0.44}, {'connected_gene': 'PCNX4', 'score': 0.2}]
chr14	GH14I059563	59563917	59567134	0.65	[{'connected_gene': 'L3HYPDH', 'score': 47.95}, {'connected_gene': 'JKAMP', 'score': 20.33}, {'connected_gene': 'RTN1', 'score': 4.71}, {'connected_gene': 'DAAM1', 'score': 4.29}, {'connected_gene': 'DHRS7', 'score': 4.09}, {'connected_gene': 'CCDC175', 'score': 0.37}, {'connected_gene': 'ENSG00000258782', 'score': 0.26}]
chr14	GH14I060204	60204150	60205352	1.01	[{'connected_gene': 'LOC101927702', 'score': 11.38}, {'connected_gene': 'PPM1A', 'score': 11.38}, {'connected_gene': 'TRMT5', 'score': 11.16}, {'connected_gene': 'L3HYPDH', 'score': 10.65}, {'connected_gene': 'DHRS7', 'score': 10.53}, {'connected_gene': 'RPL17P2', 'score': 0.44}, {'connected_gene': 'GC14P060180', 'score': 0.31}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000216500	[[60610837, 60611731], [60616070, 60616286], [60616782, 60616905], [60619656, 60619896], [60620676, 60620783], [60622717, 60622870], [60631894, 60632323], [60636414, 60636574]]	[[60611683, 60611731], [60616070, 60616286], [60616782, 60616905], [60619656, 60619896], [60620676, 60620783], [60622717, 60622870], [60631894, 60632027]]
ENST00000557185	[[60611501, 60611731], [60616070, 60616286], [60616782, 60616905], [60619656, 60619896], [60620676, 60620783], [60622717, 60622870], [60631894, 60632211]]	[[60611683, 60611731], [60616070, 60616286], [60616782, 60616905], [60619656, 60619896], [60620676, 60620783], [60622717, 60622870], [60631894, 60632027]]
ENST00000557751	[[60611523, 60611731], [60616167, 60616286], [60616782, 60616905], [60619656, 60619892]]	[[60611571, 60611731], [60616167, 60616286], [60616782, 60616905], [60619656, 60619892]]
ENST00000536410	[[60611523, 60611731], [60616070, 60616286], [60616782, 60616905], [60619656, 60619896], [60620676, 60620783], [60622717, 60622870], [60636414, 60636561]]	[[60611683, 60611731], [60616070, 60616286], [60616782, 60616905], [60619656, 60619896], [60620676, 60620783], [60622717, 60622853]]
ENST00000554101	[[60615665, 60616286], [60616782, 60616905], [60619656, 60619896], [60620676, 60620783], [60622717, 60622870], [60631894, 60632011]]	[[60615827, 60616286], [60616782, 60616905], [60619656, 60619896], [60620676, 60620783], [60622717, 60622870], [60631894, 60632011]]
ENST00000553986	[[60616176, 60616286], [60616782, 60616835], [60619656, 60619896], [60620676, 60620723]]	None
ENST00000557137	[[60616817, 60616905], [60620676, 60620783], [60622717, 60622870], [60631894, 60632026]]	[[60616817, 60616905], [60620676, 60620783], [60622717, 60622870], [60631894, 60632026]]
ENST00000556502	[[60619406, 60619896], [60620676, 60620783], [60622717, 60622870], [60631894, 60632068]]	None
ENST00000555171	[[60622549, 60622870], [60631894, 60632136]]	None
ENST00000557326	[[60622820, 60622870], [60631894, 60632323], [60632920, 60633023]]	[[60622820, 60622870], [60631894, 60632027]]
ENST00000553328	[[60632026, 60632317], [60636414, 60636489]]	None
NM_001322281	[[60610836, 60611731], [60616070, 60616286], [60616782, 60616905], [60619656, 60619896], [60620669, 60620783], [60622717, 60622870], [60631894, 60632211]]	[[60611683, 60611731], [60616070, 60616286], [60616782, 60616905], [60619656, 60619869]]
NM_016029	[[60610836, 60611731], [60616070, 60616286], [60616782, 60616905], [60619656, 60619896], [60620676, 60620783], [60622717, 60622870], [60631894, 60632211]]	[[60611683, 60611731], [60616070, 60616286], [60616782, 60616905], [60619656, 60619896], [60620676, 60620783], [60622717, 60622870], [60631894, 60632027]]
NM_001322282	[[60610836, 60611731], [60616070, 60616286], [60616782, 60616905], [60620676, 60620783], [60622717, 60622870], [60631894, 60632211]]	[[60611683, 60611731], [60616070, 60616286], [60616782, 60616905], [60620676, 60620783], [60622717, 60622870], [60631894, 60632027]]
NM_001322280	[[60610837, 60611731], [60616070, 60616286], [60616782, 60616905], [60619656, 60619896], [60620676, 60620783], [60622717, 60622870], [60636414, 60636582]]	[[60611683, 60611731], [60616070, 60616286], [60616782, 60616905], [60619656, 60619896], [60620676, 60620783], [60622717, 60622853]]