PsyMuKB

PPI network (data source: BioGrid)

A gene is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the mean normalized expression(base 2 log of (TPM+1)) +1 in all brain tissue from GTEx v7 or BrainSpan data.

A protein is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the normalized expression (base 10 log of iBAQ intensity) ≥0.5 in at least one brain tissue from ProteomicsDB data. Otherwise, a gene or protein is determined as either with below-cutoff expressions or no available data.

	The queried gene/protein
	The interacting partner is expressed at mRNA-level
	The interacting partner is expressed at protein-level
	The interacting partner is expressed at both mRNA and protein level
	The interacting partner is with either below-cutoff expressions or no expression data at both mRNA and protein level
	The interacting partner is hit by coding DNMs
	Physical interaction between queried gene/protein and its partner
	Physical interaction between two interacting partners

Symbol A	GeneA coding DNM count	Symbol B	GeneB coding DNM count	Interaction detection method	Publication	Evidence
RABGGTB	1	TRIM33	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SOX2	4	NCOR1	9	affinity chromatography technology, affinity chromatography technology	Engelen E (2011), Cox JL (2013)	2
ELAVL1	0	UBE2D3	1	affinity chromatography technology	Abdelmohsen K (2009)	1
ELAVL1	0	MAPK6	1	affinity chromatography technology	Abdelmohsen K (2009)	1
JUN	0	SMAD4	9	affinity chromatography technology	Li X (2015)	1
EPAS1	6	EWSR1	2	two hybrid	Wang J (2011)	1
EPAS1	6	SSBP3	7	affinity chromatography technology	Steunou AL (2012)	1
TRIM33	4	UBE2E1	1	pull down	Weng L (2014)	1
SMAD2	5	CDC16	2	affinity chromatography technology	Stroschein SL (2001)	1
QPRT	2	TRIM33	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
ANAPC4	0	ANAPC5	2	biochemical, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical	Havugimana PC (2012), Zhang Z (2012), Chang L (2014), Vodermaier HC (2003), Vodermaier HC (2003), Chang L (2015), Yamaguchi M (2015), Wan C (2015)	8
CRYAB	0	CTNNB1	30	unspecified method, affinity chromatography technology, affinity chromatography technology	Ghosh JG (2007), Huang Z (2012), Huang Z (2012)	3
TRIM25	5	NCOR1	9	affinity chromatography technology	Choudhury NR (2017)	1
ANAPC5	2	CDC16	2	biochemical, biochemical, affinity chromatography technology, affinity chromatography technology	Havugimana PC (2012), Wan C (2015), Hein MY (2015), Huttlin EL (2017)	4
ANAPC1	1	ANAPC5	2	biochemical, biochemical, affinity chromatography technology, biochemical	Sumara I (2000), Havugimana PC (2012), Vodermaier HC (2003), Wan C (2015)	4
CDC16	2	NCOR1	9	affinity chromatography technology	Huttlin EL (2017)	1
EWSR1	2	ZBTB1	4	two hybrid	Ravasi T (2010)	1
ELAVL1	0	CDK9	3	affinity chromatography technology	Abdelmohsen K (2009)	1
CDC20	1	ANAPC1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Nilsson J (2008), Hein JB (2014), Lischetti T (2014), Kelly A (2014), Craney A (2016), Qiao R (2016), Qiao R (2016), Hein JB (2016)	8
ERG	1	TRIM33	4	pull down	Wang S (2016)	1
HAO2	1	TRIM33	4	affinity chromatography technology	Huttlin EL (2017)	1
FZR1	1	UBE2D3	1	pull down	Jin L (2008)	1
NCOR1	9	UBE2I	0	pull down, affinity chromatography technology	Tiefenbach J (2006), Tiefenbach J (2006)	2
TRIM24	1	HIST1H3A	3	x-ray crystallography, unspecified method	Tsai WW (2010), Tsai WW (2010)	2
CDC23	3	TRIM33	4	affinity chromatography technology	Sedgwick GG (2012)	1
EPAS1	6	TRIM33	4	affinity chromatography technology	Steunou AL (2012)	1
CDC27	2	CDC23	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vodermaier HC (2003), Gmachl M (2000), Kraft C (2003), Lara-Gonzalez P (2011), Tran K (2008), Dube P (2005), Fehr AR (2012), Holzmann J (2011), Lee SJ (2012), Hayes MJ (2006), Havugimana PC (2012), Vodermaier HC (2003), Tran K (2010), Wan C (2015), Hein MY (2015), Qiao R (2016), Qiao R (2016), Boldt K (2016)	18
SSBP2	2	SSBP4	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
BUB1B	0	CDC16	2	affinity chromatography technology, affinity chromatography technology	Chan GK (1999), Tipton AR (2013)	2
WDYHV1	0	TRIM24	1	affinity chromatography technology	Huttlin EL (2017)	1
MAPK6	1	TRIM33	4	affinity chromatography technology	Rodriguez J (2016)	1
CDC16	2	TRIM33	4	affinity chromatography technology, affinity chromatography technology	Sedgwick GG (2012), Huttlin EL (2017)	2
CDC27	2	ANAPC5	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vodermaier HC (2003), Koloteva-Levine N (2004), Gmachl M (2000), Kraft C (2003), Lara-Gonzalez P (2011), Dube P (2005), Fehr AR (2012), Holzmann J (2011), Havugimana PC (2012), Song MS (2011), Vodermaier HC (2003), Tran K (2010), Kelly A (2014), Craney A (2016), Qiao R (2016)	15
CDK9	3	SUPT16H	4	affinity chromatography technology, affinity chromatography technology	Bai X (2010), Bai X (2010)	2
XPO1	8	TRIM33	4	affinity chromatography technology	Kirli K (2015)	1
ELAVL1	0	EWSR1	2	affinity chromatography technology	Abdelmohsen K (2009)	1
UBE2E1	1	CUL3	17	pull down	Plafker KS (2009)	1
CDC20	1	CDC27	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, unspecified method, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	DAngiolella V (2003), Kallio MJ (2002), Wassmann K (1998), Kramer ER (1998), Kallio M (1998), Kallio M (1998), Nilsson J (2008), Jeganathan KB (2006), Nath S (2011), Lee YJ (2008), Lara-Gonzalez P (2011), Mansfeld J (2011), Braunstein I (2007), Visconti R (2010), Ma HT (2011), Lee YJ (2008), DAngiolella V (2003), Lee SJ (2012), Fang G (1998), Fang G (1998), Wolthuis R (2008), Ban KH (2007), Ge S (2009), Tipton AR (2011), Westhorpe FG (2011), Uzunova K (2012), Kwan PS (2013), Sedgwick GG (2012), Eytan E (2013), Hyun SY (2013), Lim HJ (2013), Choi BH (2014), Fogeron ML (2013), Sackton KL (2014), Shoji S (2014), Han JS (2014), Lara-Gonzalez P (2011), Hein JB (2014), Vodermaier HC (2003), Yen AH (2010), Voets E (2015), Boekhout M (2015), Kelly A (2014), Kelly A (2014), Craney A (2016), Craney A (2016), Craney A (2016), Listovsky T (2013), Qiao R (2016), Qiao R (2016), Qiao R (2016), Qiao R (2016), Qiao R (2016), Hein JB (2016)	54
NTRK1	1	RFC4	1	affinity chromatography technology	Emdal KB (2015)	1
TRIM33	4	SMAD4	9	enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Agricola E (2011), Fattet L (2013), Bellaye PS (2014), Xue J (2014), Xue J (2014), Wu Y (2017)	6
ELAVL1	0	DHX33	1	affinity chromatography technology	Abdelmohsen K (2009)	1
TRIM33	4	TCF4	26	affinity chromatography technology, affinity chromatography technology	Bai X (2010), Li X (2015)	2
TRIM33	4	FGA	5	affinity chromatography technology	Hein MY (2015)	1
CUL3	17	SUPT16H	4	affinity chromatography technology	Bennett EJ (2010)	1
TRIM33	4	TAL1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bai X (2010), Bai X (2010), Bai X (2010)	3
FOXA1	2	HIST1H3A	3	affinity chromatography technology	Jozwik KM (2016)	1
UBE2I	0	PSME3	0	enzymatic study	Wu Y (2011)	1
EWSR1	2	TRIM33	4	bioid	Elzi DJ (2014)	1
TRIM33	4	CTNNB1	30	affinity chromatography technology, affinity chromatography technology, enzymatic study	Xue J (2015), Xue J (2015), Xue J (2015)	3
XPO1	8	ANAPC5	2	affinity chromatography technology	Kirli K (2015)	1
SMAD4	9	SMAD2	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, x-ray crystallography, pull down, affinity chromatography technology, two hybrid, two hybrid, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Moren A (2003), Wotton D (1999), Mori N (2001), Wu JW (2002), Wu JW (2002), Nakao A (1997), Wicks SJ (2000), Wu JW (2001), Chen X (1997), Hanai J (1999), Lebrun JJ (1999), Poncelet AC (2001), Razani B (2001), Razani B (2001), Wang B (2008), Moren A (2005), Kurisaki K (2003), Prunier C (2003), Kato Y (2002), Xu J (2000), Wang L (2011), He W (2006), He W (2006), Dupont S (2009), Brown JD (1999), Pardali K (2000), Fu G (2011), Chen W (2007), Gao S (2009), Lin X (2003), Seo SR (2006), Brown KA (2008), Brown KA (2008), Halder SK (2005), Barrios-Rodiles M (2005), Barrios-Rodiles M (2005), Dai F (2007), Chacko BM (2004), Chacko BM (2004), Chacko BM (2004), Wu RY (1997), Wu RY (1997), Tomita M (2004), Colland F (2004), Tang Y (2003), Ding L (2009), Fattet L (2013), Wang J (2011), Ali A (2013), Yamakawa N (2002), Yamakawa N (2002), Li X (2015), Zhou F (2014), Yang Y (2015), Yan X (2016), Zhou F (2017)	56
TRIM33	4	LDB1	2	affinity chromatography technology, affinity chromatography technology	Bai X (2010), Howard PW (2010)	2
TCF4	26	TCF3	7	two hybrid, affinity chromatography technology	Ravasi T (2010), Huttlin EL (2017)	2
LDB1	2	SSBP3	7	two hybrid, affinity chromatography technology, affinity chromatography technology	Rolland T (2014), Huttlin EL (2015), Huttlin EL (2017)	3
RUNX1	0	JUN	0	pull down, affinity chromatography technology, pull down	Hess J (2001), Hess J (2001), DAlonzo RC (2002)	3
TRIM33	4	DHX33	1	affinity chromatography technology, enzymatic study, affinity chromatography technology	Weng L (2014), Weng L (2014), Weng L (2014)	3
RUNX1	0	TCF12	14	affinity chromatography technology	Zhang J (2004)	1
CDC16	2	ANAPC7	2	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hutchins JR (2010), Havugimana PC (2012), Hein MY (2015), Huttlin EL (2017), Boldt K (2016)	5
SKIL	3	FZR1	1	affinity chromatography technology	Stroschein SL (2001)	1
XPO1	8	CDC20	1	affinity chromatography technology	Kirli K (2015)	1
ANAPC4	0	CCNA2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Izawa D (2011), Di Fiore B (2015), Voets E (2015)	3
LYL1	0	TCF3	7	two hybrid, pull down, affinity chromatography technology	Miyamoto A (1996), Miyamoto A (1996), Miyamoto A (1996)	3
EWSR1	2	SSBP2	2	two hybrid	Rual JF (2005)	1
SOX2	4	ANAPC4	0	affinity chromatography technology	Cox JL (2013)	1
TRIM25	5	ELAVL1	0	affinity chromatography technology, affinity chromatography technology	Choudhury NR (2017), Choudhury NR (2017)	2
CNKSR1	2	TRIM24	1	affinity chromatography technology	Huttlin EL (2017)	1
TRIM25	5	CTNNB1	30	affinity chromatography technology	Choudhury NR (2017)	1
CDC27	2	ANAPC1	1	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Vodermaier HC (2003), Sumara I (2000), Lara-Gonzalez P (2011), Tran K (2008), Dube P (2005), Holzmann J (2011), Havugimana PC (2012), Vodermaier HC (2003), Tran K (2010), Wan C (2015), Qiao R (2016), Qiao R (2016)	12
NCOR1	9	RUNX1T1	1	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, two hybrid	Amann JM (2001), Zhang J (2001), Amann JM (2005), Zhang J (2004), Minucci S (2000), Gelmetti V (1998), Gelmetti V (1998), Wei Y (2007)	8
TRIM33	4	CDK9	3	affinity chromatography technology, affinity chromatography technology	Bai X (2010), Bai X (2010)	2
CDC20	1	ANAPC5	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Sedgwick GG (2012), Kelly A (2014), Kelly A (2014), Craney A (2016), Craney A (2016), Qiao R (2016)	6
CHD1L	5	TRIM33	4	affinity chromatography technology, affinity chromatography technology, imaging technique	Kulkarni A (2013), Kulkarni A (2013), Kulkarni A (2013)	3
RFC4	1	TRIM33	4	biochemical	Wan C (2015)	1
TAL1	0	SSBP3	7	affinity chromatography technology, affinity chromatography technology	Goardon N (2006), Hu X (2009)	2
CHD1L	5	SSRP1	1	affinity chromatography technology	Huttlin EL (2017)	1
CBFA2T3	3	RUNX1T1	1	affinity chromatography technology, affinity chromatography technology	Lindberg SR (2003), Hoogeveen AT (2002)	2
SMAD3	1	RUNX1	0	affinity chromatography technology, affinity chromatography technology	Hanai J (1999), Nitta E (2005)	2
FOXA1	2	SSRP1	1	affinity chromatography technology	Jozwik KM (2016)	1
CDC20	1	BUB1B	0	affinity chromatography technology, pull down, affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, x-ray crystallography, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, unspecified method, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down	Fang G (2002), Fang G (2002), Wu H (2000), Wu H (2000), Wu H (2000), Kallio MJ (2002), Sudakin V (2001), Sudakin V (2001), Skoufias DA (2001), Nilsson J (2008), Ho CY (2010), Ho CY (2010), Garnett MJ (2009), Hutchins JR (2010), Di Fiore B (2010), Di Fiore B (2010), Mansfeld J (2011), Jia L (2011), Braunstein I (2007), Eytan E (2008), Eytan E (2008), Ma HT (2011), Miniowitz-Shemtov S (2012), Tang Z (2001), Tang Z (2001), Tang Z (2001), Tang Z (2001), Bolanos-Garcia VM (2011), Ge S (2009), Liu L (2007), Westhorpe FG (2011), Westhorpe FG (2011), Kwan PS (2013), Tian W (2012), Tian W (2012), Tian W (2012), Santaguida S (2011), Hyun SY (2013), Han JS (2013), Rodriguez-Bravo V (2014), Fogeron ML (2013), Wang K (2014), Han JS (2014), Izawa D (2014), Hein JB (2014), So J (2015), Scialpi F (2015), Scialpi F (2015), Diaz-Martinez LA (2015), Diaz-Martinez LA (2015), Di Fiore B (2015), Di Fiore B (2015), Di Fiore B (2015), Di Fiore B (2015), Voets E (2015), Chen TC (2014), Lischetti T (2014), Lischetti T (2014), Lischetti T (2014), Tipton AR (2013), Boekhout M (2015), Kelly A (2014), Kelly A (2014), Craney A (2016), Craney A (2016), Sedgwick GG (2016), Qiao R (2016), Huttlin EL (2017), Izawa D (2012), Jia L (2016), Jia L (2016), Hein JB (2016), Kaisari S (2017)	73
CDC20	1	CDC16	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Kallio MJ (2002), Kallio M (1998), Nilsson J (2008), Hutchins JR (2010), Fogeron ML (2013), Hein JB (2014), Hein MY (2015), Kelly A (2014), Craney A (2016), Listovsky T (2013), Qiao R (2016), Izawa D (2012)	12
XPO1	8	ANAPC7	2	affinity chromatography technology	Kirli K (2015)	1
ELAVL1	0	TRIM33	4	affinity chromatography technology	Abdelmohsen K (2009)	1
CDC27	2	CTNNB1	30	pull down	Gomes NP (2006)	1
CDC16	2	TRIM24	1	affinity chromatography technology	Huttlin EL (2017)	1
XPO1	8	ZBTB1	4	affinity chromatography technology	Kirli K (2015)	1
SOX2	4	MTA1	3	affinity chromatography technology, affinity chromatography technology	Engelen E (2011), Cox JL (2013)	2
ELAVL1	0	CDC23	3	affinity chromatography technology	Abdelmohsen K (2009)	1
XPO1	8	KLHL20	2	affinity chromatography technology	Kirli K (2015)	1
UBE2I	0	UBE2E1	1	biochemical	Wan C (2015)	1
NTRK1	1	EWSR1	2	affinity chromatography technology	Emdal KB (2015)	1
ELAVL1	0	TCF12	14	affinity chromatography technology	Abdelmohsen K (2009)	1
MAPK6	1	VDAC2	1	affinity chromatography technology	Rodriguez J (2016)	1
CDK9	3	SMAD3	1	enzymatic study	Alarcon C (2009)	1
TRIM33	4	SSBP3	7	affinity chromatography technology	Bai X (2010)	1
TAL1	0	LYL1	0	affinity chromatography technology	Hu X (2009)	1
JUN	0	NCOR1	9	imaging technique	Subbaramaiah K (2007)	1
ANAPC1	1	CDC23	3	biochemical, biochemical, affinity chromatography technology	Sumara I (2000), Havugimana PC (2012), Hein MY (2015)	3
LMO2	2	SSBP4	0	affinity chromatography technology	Huttlin EL (2017)	1
TRIM33	4	CDC20	1	affinity chromatography technology, affinity chromatography technology	Sedgwick GG (2012), Sedgwick GG (2012)	2
TAL1	0	LDB1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Goardon N (2006), Goardon N (2006), Goardon N (2006), Hu X (2009)	4
JUN	0	EWSR1	2	pull down, bioid	Fuchs B (2003), Elzi DJ (2014)	2
NTRK1	1	XPO1	8	affinity chromatography technology	Emdal KB (2015)	1
HIST1H3A	3	NCOR1	9	pull down	Yu J (2003)	1
CDC20	1	ANAPC4	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology	Mansfeld J (2011), Mansfeld J (2011), Izawa D (2011), Ma HT (2011), Wolthuis R (2008), Sedgwick GG (2012), Zhang Z (2012), Chang L (2014), Fogeron ML (2013), Hein JB (2014), Hein JB (2014), Voets E (2015), Voets E (2015), Tipton AR (2013), Boekhout M (2015), Kelly A (2014), Craney A (2016), Craney A (2016), Sedgwick GG (2016), Qiao R (2016), Izawa D (2012), Izawa D (2012), Izawa D (2012), Izawa D (2012), Salsi V (2016)	25
SMAD3	1	JUN	0	two hybrid, affinity chromatography technology, pull down, affinity chromatography technology, pull down, pull down, affinity chromatography technology	Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Verrecchia F (2000), Liberati NT (1999), Liberati NT (2001), Lee SY (2011)	7
UBE2I	0	TCF4	26	enzymatic study	Brandt M (2013)	1
CDC16	2	CDC23	3	biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Havugimana PC (2012), Wan C (2015), Hein MY (2015), Hein MY (2015), Huttlin EL (2017), Boldt K (2016)	6
TCF4	26	TCF12	14	affinity chromatography technology, affinity chromatography technology	Li X (2015), Huttlin EL (2017)	2
TCF3	7	CBFA2T3	3	affinity chromatography technology, affinity chromatography technology, pull down	Goardon N (2006), Goardon N (2006), Goardon N (2006)	3
LDB1	2	LMO2	2	affinity chromatography technology, affinity chromatography technology, two hybrid, two hybrid, affinity chromatography technology	Deane JE (2003), Xu Z (2007), Wang J (2011), Rolland T (2014), Huttlin EL (2017)	5
ELAVL1	0	MTA1	3	affinity chromatography technology	Abdelmohsen K (2009)	1
SSBP2	2	SSBP3	7	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
ZNF324B	1	TRIM24	1	affinity chromatography technology	Huttlin EL (2017)	1
CCNA2	1	CDC20	1	pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Mateo F (2009), Di Fiore B (2010), Di Fiore B (2010), Di Fiore B (2010), Wolthuis R (2008), Wolthuis R (2008), Ge S (2009), Townsend K (2009), Di Fiore B (2010), Mateo F (2009), Mateo F (2009), Huttlin EL (2015), Di Fiore B (2015), Di Fiore B (2015), Di Fiore B (2015), Di Fiore B (2015), Hein MY (2015), Voets E (2015), Kelly A (2014), Kelly A (2014), Craney A (2016), Craney A (2016), Huttlin EL (2017), Izawa D (2012), Hein JB (2016)	25
TRIM25	5	TCF12	14	affinity chromatography technology	Choudhury NR (2017)	1
LMO2	2	TRIM33	4	affinity chromatography technology	Huttlin EL (2017)	1
TCF12	14	SMAD2	5	affinity chromatography technology	Yoon SJ (2011)	1
ELAVL1	0	XPO1	8	affinity chromatography technology	Abdelmohsen K (2009)	1
BUB1B	0	CDC27	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Chan GK (1999), Hutchins JR (2010), Lara-Gonzalez P (2011), Mansfeld J (2011), Tipton AR (2011), Westhorpe FG (2011), Uzunova K (2012), Eytan E (2013), Wang K (2014), Han JS (2014), Han JS (2014), Lara-Gonzalez P (2011), So J (2015), Boekhout M (2015), Kelly A (2014), Craney A (2016), Qiao R (2016)	17
SSBP2	2	LMO2	2	affinity chromatography technology, affinity chromatography technology	Xu Z (2007), Huttlin EL (2017)	2
QPRT	2	NCOR1	9	affinity chromatography technology	Huttlin EL (2015)	1
TRIM33	4	SSB	0	affinity chromatography technology	Hein MY (2015)	1
UBE2I	0	XPO1	8	biochemical	Havugimana PC (2012)	1
SSRP1	1	SUPT16H	4	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology	Birch JL (2009), Tan BC (2006), Tan BC (2006), Pavri R (2006), Huang JY (2006), Huang JY (2006), OConnell BC (2010), Havugimana PC (2012), Kristensen AR (2012), Wan C (2015), Huttlin EL (2017), Boldt K (2016)	12
SMAD4	9	UBE2I	0	two hybrid, two hybrid, two hybrid, two hybrid, affinity chromatography technology, two hybrid	Rual JF (2005), Chang CC (2005), Lin X (2003), Colland F (2004), Wang J (2011), Wang J (2011)	6
TRIM33	4	TCF12	14	affinity chromatography technology	Bai X (2010)	1
TRIM33	4	UBE2D3	1	pull down, pull down	Agricola E (2011), Weng L (2014)	2
NTRK1	1	TRIM33	4	affinity chromatography technology	Emdal KB (2015)	1
CDC23	3	BUB1B	0	affinity chromatography technology	Hein MY (2015)	1
NTRK1	1	CTNNB1	30	affinity chromatography technology	Emdal KB (2015)	1
TRIM25	5	PSME3	0	affinity chromatography technology	Choudhury NR (2017)	1
XPO1	8	CTNNB1	30	affinity chromatography technology	Kirli K (2015)	1
CUL3	17	SSB	0	affinity chromatography technology	Bennett EJ (2010)	1
ELAVL1	0	TCF3	7	affinity chromatography technology, affinity chromatography technology	Abdelmohsen K (2009), Teachenor R (2012)	2
MTA1	3	TRIM33	4	biochemical	Wan C (2015)	1
SOX2	4	ANAPC1	1	affinity chromatography technology	Cox JL (2013)	1
XPO1	8	TCF3	7	affinity chromatography technology	Kirli K (2015)	1
SMAD2	5	TRIM33	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Xi Q (2008), He W (2006), He W (2006), Xi Q (2011), Fattet L (2013)	5
FZR1	1	ANAPC1	1	pull down, unspecified method, affinity chromatography technology	Vodermaier HC (2003), Vodermaier HC (2003), Huttlin EL (2017)	3
ANAPC1	1	ANAPC7	2	biochemical, biochemical, biochemical	Sumara I (2000), Havugimana PC (2012), Wan C (2015)	3
CDC20	1	CUL3	17	affinity chromatography technology	Wu F (2017)	1
LHX6	1	SSBP4	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CNKSR1	2	TRIM33	4	affinity chromatography technology	Huttlin EL (2017)	1
ZIM2	0	TRIM24	1	affinity chromatography technology	Huttlin EL (2017)	1
NTRK1	1	CUL3	17	affinity chromatography technology	Emdal KB (2015)	1
SMAD3	1	CDC27	2	affinity chromatography technology	Stroschein SL (2001)	1
SOX2	4	CDC23	3	affinity chromatography technology	Cox JL (2013)	1
BUB1B	0	ANAPC1	1	affinity chromatography technology, affinity chromatography technology	So J (2015), Lischetti T (2014)	2
CHD1L	5	SUPT16H	4	affinity chromatography technology, affinity chromatography technology	Gottschalk AJ (2009), Huttlin EL (2017)	2
ANAPC4	0	CDC16	2	affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, biochemical, pull down, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Mansfeld J (2011), Ma HT (2011), Havugimana PC (2012), Zhang Z (2012), Chang L (2014), Vodermaier HC (2003), Vodermaier HC (2003), Chang L (2015), Yamaguchi M (2015), Wan C (2015), Hein MY (2015), Masuda K (2015), Boekhout M (2015), Huttlin EL (2017)	14
SMAD3	1	CTNNB1	30	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Tian YC (2002), Dahle O (2010), Charbonney E (2011), Zhou B (2012)	4
NTRK1	1	SUPT16H	4	affinity chromatography technology	Emdal KB (2015)	1
NANOG	0	TRIM33	4	affinity chromatography technology	Oliviero G (2015)	1
UBE2D3	1	TRIM25	5	two hybrid, pull down, pull down, affinity chromatography technology	Markson G (2009), Ronchi VP (2012), Choudhury NR (2017), Choudhury NR (2017)	4
SMAD3	1	TRIM33	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Xi Q (2008), He W (2006), Xi Q (2011), Xue J (2014), Gao S (2009)	5
ANAPC5	2	TRIM33	4	affinity chromatography technology, affinity chromatography technology	Sedgwick GG (2012), Sedgwick GG (2012)	2
TRIM25	5	MTA1	3	affinity chromatography technology, affinity chromatography technology	Choudhury NR (2017), Zang HL (2017)	2
ZBTB1	4	TRIM33	4	affinity chromatography technology	Kim H (2014)	1
TRIM33	4	BUB1B	0	affinity chromatography technology	Sedgwick GG (2012)	1
HIST1H3A	3	SSRP1	1	pull down, affinity chromatography technology	Kouskouti A (2005), Huttlin EL (2017)	2
SOX2	4	TRIM33	4	affinity chromatography technology	Cox JL (2013)	1
NTRK1	1	RRM1	3	affinity chromatography technology	Emdal KB (2015)	1
TAL1	0	TCF3	7	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, two hybrid, affinity chromatography technology	Goardon N (2006), Goardon N (2006), Goardon N (2006), Goardon N (2006), Hsu HL (1994), Hsu HL (1994), Hu X (2009)	7
CDC27	2	TRIM33	4	affinity chromatography technology, affinity chromatography technology	Sedgwick GG (2012), Sedgwick GG (2012)	2
JUN	0	TRIM33	4	affinity chromatography technology	Li X (2015)	1
TRIM33	4	UBE2N	1	pull down	Weng L (2014)	1
SKIL	3	NCOR1	9	two hybrid, affinity chromatography technology, pull down, affinity chromatography technology, imaging technique, two hybrid, affinity chromatography technology	Nomura T (1999), Nomura T (1999), Nomura T (1999), Nomura T (1999), Nomura T (1999), Colland F (2004), He J (2003)	7
SOX2	4	ANAPC5	2	affinity chromatography technology	Cox JL (2013)	1
CDC20	1	CDC23	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Nilsson J (2008), Fogeron ML (2013), Hein JB (2014), Hein MY (2015), Kelly A (2014), Craney A (2016), Qiao R (2016), Qiao R (2016)	8
TRIM33	4	RUNX1T1	1	affinity chromatography technology	Bai X (2010)	1
FZR1	1	CDC27	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhou Y (2003), Kramer ER (1998), Farhana L (2002), Cen B (2010), Sorensen CS (2001), Binne UK (2007), Wang X (2008), Tran K (2008), Wang LY (2012), Wang LY (2012), Ban KH (2007), Lv XB (2010), Huang KT (2012), Song MS (2011), Fukushima H (2013), Lau AW (2013), Cotto-Rios XM (2011), Vodermaier HC (2003), Vodermaier HC (2003), Vodermaier HC (2003), Choi BH (2014), Jeganathan KB (2006), Fang G (1998), Sedgwick GG (2012), Kelly A (2014), Listovsky T (2013), Pavlides SC (2016), Huttlin EL (2017)	28
ERG	1	ELAVL1	0	affinity chromatography technology, pull down	Wang S (2014), Wang S (2014)	2
HIST1H3A	3	SUPT16H	4	affinity chromatography technology	Huttlin EL (2017)	1
NANOG	0	MTA1	3	affinity chromatography technology	Oliviero G (2015)	1
UBE2I	0	TCF3	7	pull down, two hybrid	Huggins GS (1999), Huggins GS (1999)	2
RUNX1T1	1	TCF12	14	affinity chromatography technology, pull down	Zhang J (2004), Zhang J (2004)	2
TRIM25	5	SMAD3	1	affinity chromatography technology	Choudhury NR (2017)	1
EWSR1	2	SMAD4	9	two hybrid	Rual JF (2005)	1
MAPK6	1	PSME3	0	affinity chromatography technology	Rodriguez J (2016)	1
ANAPC7	2	TRIM33	4	affinity chromatography technology	Sedgwick GG (2012)	1
FOXI1	1	TRIM33	4	affinity chromatography technology	Li X (2015)	1
ANAPC4	0	FZR1	1	biochemical, biochemical, unspecified method, biochemical, affinity chromatography technology, affinity chromatography technology	Zhang Z (2012), Chang L (2014), Vodermaier HC (2003), Chang L (2015), Boekhout M (2015), Huttlin EL (2017)	6
CCNA2	1	CDC27	2	affinity chromatography technology	Mateo F (2009)	1
NTRK1	1	TRIM24	1	affinity chromatography technology	Emdal KB (2015)	1
TRIM33	4	CCNA2	1	affinity chromatography technology	Sedgwick GG (2012)	1
NTRK1	1	CDC27	2	affinity chromatography technology	Emdal KB (2015)	1
TRIM25	5	MAPK6	1	affinity chromatography technology	Choudhury NR (2017)	1
CTNNB1	30	CCNA2	1	pull down, affinity chromatography technology	Park CS (2004), Park CS (2004)	2
ELAVL1	0	SMAD2	5	affinity chromatography technology	Abdelmohsen K (2009)	1
LYL1	0	LMO2	2	two hybrid	Wadman I (1994)	1
CUL3	17	TRIM33	4	affinity chromatography technology	Bennett EJ (2010)	1
EWSR1	2	SUPT16H	4	bioid	Elzi DJ (2014)	1
LDB1	2	SSBP2	2	two hybrid, affinity chromatography technology, affinity chromatography technology	Rual JF (2005), Huttlin EL (2015), Huttlin EL (2017)	3
TAL1	0	CBFA2T3	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Goardon N (2006), Goardon N (2006), Goardon N (2006), Goardon N (2006), Hu X (2009)	5
TAL1	0	CDK9	3	affinity chromatography technology, affinity chromatography technology	Bai X (2010), Bai X (2010)	2
SEM1	0	UBE2I	0	affinity chromatography technology	Besche HC (2014)	1
WDYHV1	0	TRIM33	4	affinity chromatography technology	Huttlin EL (2017)	1
FOXA1	2	XPO1	8	affinity chromatography technology	Jozwik KM (2016)	1
ELAVL1	0	UBE2N	1	affinity chromatography technology	Abdelmohsen K (2009)	1
CUL3	17	CTNNB1	30	affinity chromatography technology	Bennett EJ (2010)	1
TRIM25	5	FZR1	1	affinity chromatography technology	Choudhury NR (2017)	1
FZR1	1	CDC20	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, pull down	Stewart S (2005), Stewart S (2005), Wang Y (2007), Wang Y (2007), Tian W (2012), Hyun SY (2013), Hyun SY (2013)	7
TCF4	26	RUNX1T1	1	affinity chromatography technology, affinity chromatography technology	Li X (2015), Huttlin EL (2017)	2
ZIM2	0	TRIM33	4	affinity chromatography technology	Huttlin EL (2017)	1
TRIM25	5	SUPT16H	4	affinity chromatography technology	Choudhury NR (2017)	1
TAL1	0	TCF4	26	pull down, affinity chromatography technology, two hybrid	Goldfarb AN (1996), Goardon N (2006), Langlands K (1997)	3
BUB1B	0	CCNA2	1	pull down	Di Fiore B (2015)	1
ELAVL1	0	VDAC2	1	biochemical	Havugimana PC (2012)	1
EWSR1	2	NCOR1	9	bioid	Elzi DJ (2014)	1
TCF3	7	LDB1	2	affinity chromatography technology, affinity chromatography technology	Goardon N (2006), Goardon N (2006)	2
NTRK1	1	SSRP1	1	affinity chromatography technology	Emdal KB (2015)	1
TRIM33	4	VDAC2	1	affinity chromatography technology	Hein MY (2015)	1
TRIM25	5	XPO1	8	affinity chromatography technology	Choudhury NR (2017)	1
RUNX1	0	CBFA2T3	3	affinity chromatography technology	Shia WJ (2012)	1
TAL1	0	LMO2	2	two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, two hybrid, two hybrid, affinity chromatography technology, pull down, two hybrid	Wadman I (1994), Valge-Archer VE (1994), Goardon N (2006), Osada H (1995), Osada H (1995), Osada H (1995), Osada H (1995), Wadman I (1994), Wadman I (1994), Wadman I (1994)	10
FOXA1	2	LDB1	2	affinity chromatography technology	Li X (2015)	1
CDC27	2	CDC16	2	affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, imaging technique, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vodermaier HC (2003), Ollendorff V (1997), Kallio M (1998), Gmachl M (2000), Kraft C (2003), Li Y (1997), Lara-Gonzalez P (2011), Binne UK (2007), van Zon W (2010), Dube P (2005), Holzmann J (2011), Hayes MJ (2006), Tugendreich S (1995), Havugimana PC (2012), Vodermaier HC (2003), Wan C (2015), Hein MY (2015), Kelly A (2014), Listovsky T (2013), Qiao R (2016), Huttlin EL (2017), Boldt K (2016)	22
NCOR1	9	TRIM33	4	affinity chromatography technology	Yoon HG (2003)	1
TCF12	14	TCF3	7	affinity chromatography technology	Yoon SJ (2011)	1
FOXA1	2	DHX33	1	affinity chromatography technology	Jozwik KM (2016)	1
SMAD4	9	SKIL	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Stroschein SL (1999), Stroschein SL (1999), Barrios-Rodiles M (2005), Colland F (2004), Colland F (2004), He J (2003), He J (2003), Ikeuchi Y (2014), Jinnin M (2007), Li X (2015)	10
ELAVL1	0	FOXA1	2	affinity chromatography technology	Abdelmohsen K (2009)	1
ANAPC4	0	CDC23	3	biochemical, biochemical, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Havugimana PC (2012), Zhang Z (2012), Chang L (2014), Vodermaier HC (2003), Chang L (2015), Yamaguchi M (2015), Wan C (2015), Hein MY (2015)	8
CDC27	2	ANAPC4	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vodermaier HC (2003), Gmachl M (2000), Kraft C (2003), Mansfeld J (2011), Lara-Gonzalez P (2011), Mansfeld J (2011), Izawa D (2011), Ma HT (2011), Ma HT (2011), Ma HT (2011), Dube P (2005), Holzmann J (2011), Wolthuis R (2008), Havugimana PC (2012), Uzunova K (2012), Song MS (2011), Zhang Z (2012), Chang L (2014), Hein JB (2014), Vodermaier HC (2003), Vodermaier HC (2003), Vodermaier HC (2003), Tran K (2010), Chang L (2015), Yamaguchi M (2015), Wan C (2015), Hein MY (2015), Voets E (2015), Masuda K (2015), Boekhout M (2015), Craney A (2016), Qiao R (2016), Izawa D (2012), Hein JB (2016)	34
CDC27	2	ANAPC7	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vodermaier HC (2003), Gmachl M (2000), Kraft C (2003), Lara-Gonzalez P (2011), Tran K (2008), Dube P (2005), Holzmann J (2011), Havugimana PC (2012), Sedgwick GG (2012), Song MS (2011), Vodermaier HC (2003), Tran K (2010), Yamaguchi M (2015), Yamaguchi M (2015), Wan C (2015), Kelly A (2014), Craney A (2016), Qiao R (2016), Boldt K (2016)	19
CDK9	3	SMAD4	9	genetic interference	Shen JP (2017)	1
NTRK1	1	SSB	0	affinity chromatography technology	Emdal KB (2015)	1
MAPK6	1	CTNNB1	30	affinity chromatography technology	Rodriguez J (2016)	1
TRIM33	4	UBE2I	0	affinity chromatography technology, affinity chromatography technology	Fattet L (2013), Ikeuchi Y (2014)	2
TRIM33	4	LYL1	0	affinity chromatography technology	Bai X (2010)	1
SMAD2	5	CDC27	2	affinity chromatography technology	Stroschein SL (2001)	1
PSME3	0	TRIM33	4	affinity chromatography technology	Huttlin EL (2015)	1
TRIM33	4	TRIM33	4	pull down, affinity chromatography technology	Peng H (2002), Bai X (2010)	2
FZR1	1	ANAPC5	2	unspecified method, affinity chromatography technology, affinity chromatography technology	Vodermaier HC (2003), Sedgwick GG (2012), Huttlin EL (2017)	3
XPO1	8	SSRP1	1	affinity chromatography technology	Kirli K (2015)	1
SOX2	4	TCF3	7	affinity chromatography technology	Engelen E (2011)	1
TCF4	26	ANAPC1	1	affinity chromatography technology	Li X (2015)	1
ANAPC1	1	ANAPC4	0	biochemical, biochemical, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical	Sumara I (2000), Havugimana PC (2012), Zhang Z (2012), Chang L (2014), Hein JB (2014), Vodermaier HC (2003), Chang L (2015), Yamaguchi M (2015), Wan C (2015)	9
ELAVL1	0	RUNX1	0	affinity chromatography technology	Abdelmohsen K (2009)	1
ELAVL1	0	SSB	0	affinity chromatography technology	Abdelmohsen K (2009)	1
RUNX1	0	TCF3	7	affinity chromatography technology	Zhang J (2004)	1
SMAD2	5	RUNX1	0	affinity chromatography technology	Hanai J (1999)	1
SMAD3	1	EPAS1	6	imaging technique, two hybrid, imaging technique	Chae KS (2011), Colland F (2004), Chen TC (2014)	3
TCF4	26	LYL1	0	two hybrid	Langlands K (1997)	1
LHX6	1	SSBP2	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
RUNX1	0	RUNX1T1	1	biochemical, affinity chromatography technology	Minucci S (2000), Shia WJ (2012)	2
TRIM25	5	ANAPC1	1	affinity chromatography technology	Choudhury NR (2017)	1
SMAD3	1	SMAD2	5	affinity chromatography technology, genetic interference, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology	Nakao A (1997), Lebrun JJ (1999), Dumont E (2003), Brown KA (2008), Brown KA (2008), Wu RY (1997), Wu RY (1997), Tang Y (2003), Tang Y (2003), Wang J (2011), Huttlin EL (2015), Huttlin EL (2017)	12
LDB1	2	SSBP4	0	two hybrid, affinity chromatography technology, affinity chromatography technology	Rual JF (2005), Huttlin EL (2015), Huttlin EL (2017)	3
SOX2	4	SSB	0	affinity chromatography technology	Cox JL (2013)	1
NLGN3	3	TRIM33	4	two hybrid	Shen C (2015)	1
BUB1B	0	ANAPC7	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Chan GK (1999), Hutchins JR (2010), Sedgwick GG (2012), Sedgwick GG (2016)	4
NANOG	0	TRIM24	1	affinity chromatography technology	Oliviero G (2015)	1
XPO1	8	ANAPC4	0	affinity chromatography technology	Kirli K (2015)	1
TCF4	26	CBFA2T3	3	affinity chromatography technology, affinity chromatography technology	Li X (2015), Huttlin EL (2017)	2
ANAPC5	2	ANAPC7	2	biochemical, affinity chromatography technology	Havugimana PC (2012), Sedgwick GG (2012)	2
XPO1	8	CDC27	2	affinity chromatography technology	Kirli K (2015)	1
NCOR1	9	RUNX1	0	pull down	Minucci S (2000)	1
FZR1	1	ANAPC7	2	unspecified method, affinity chromatography technology	Vodermaier HC (2003), Sedgwick GG (2012)	2
EPAS1	6	CTNNB1	30	affinity chromatography technology	Steunou AL (2012)	1
MTA1	3	UBE2I	0	affinity chromatography technology, pull down	Cong L (2011), Cong L (2011)	2
EPAS1	6	JUN	0	fluorescent resonance energy transfe	Reinke AW (2013)	1
SOX2	4	CTNNB1	30	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cox JL (2013), Xu C (2013), Xu C (2013)	3
LMO2	2	UBE2I	0	two hybrid	Rolland T (2014)	1
XPO1	8	C17orf53	4	affinity chromatography technology	Kirli K (2015)	1
LHX6	1	SSBP3	7	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SSBP4	0	SSBP3	7	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
TAL1	0	SSBP2	2	affinity chromatography technology, affinity chromatography technology	Goardon N (2006), Hu X (2009)	2
SOX2	4	ANAPC7	2	affinity chromatography technology	Cox JL (2013)	1
CRYAB	0	SMAD4	9	affinity chromatography technology, affinity chromatography technology	Bellaye PS (2014), Bellaye PS (2014)	2
SMAD2	5	CTNNB1	30	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Tian YC (2002), Dahle O (2010), Xi Y (2013)	3
SMAD4	9	CTNNB1	30	affinity chromatography technology	Tian YC (2002)	1
LDB1	2	LHX6	1	two hybrid, affinity chromatography technology, affinity chromatography technology	Rolland T (2014), Huttlin EL (2015), Huttlin EL (2017)	3
NTRK1	1	MTA1	3	affinity chromatography technology	Emdal KB (2015)	1
EWSR1	2	SSB	0	bioid	Elzi DJ (2014)	1
EWSR1	2	SSBP3	7	two hybrid	Rolland T (2014)	1
ERG	1	JUN	0	pull down, pull down	Verger A (2001), Verger A (2001)	2
XPO1	8	CDC23	3	affinity chromatography technology	Kirli K (2015)	1
TRIM25	5	DHX33	1	affinity chromatography technology	Choudhury NR (2017)	1
TRIM33	4	RUNX1	0	affinity chromatography technology	Bai X (2010)	1
NCOR1	9	CBFA2T3	3	affinity chromatography technology, affinity chromatography technology	Amann JM (2001), Olsson A (2008)	2
ERG	1	TRIM25	5	pull down, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study	Wang S (2016), Wang S (2016), Wang S (2016), Wang S (2016), Wang S (2016)	5
NTRK1	1	TCF4	26	affinity chromatography technology	Emdal KB (2015)	1
CCNA2	1	SSB	0	affinity chromatography technology	Hein MY (2015)	1
SMAD3	1	SMAD4	9	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, x-ray crystallography, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, two hybrid, two hybrid, pull down, pull down, pull down, two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, protein complementation assay, affinity chromatography technology, affinity chromatography technology	Seoane J (2004), Moren A (2003), Wu JW (2002), Nakao A (1997), Hanai J (1999), Lebrun JJ (1999), Poncelet AC (2001), Jablonska E (2010), Prunier C (2003), Kato Y (2002), Kaimori A (2010), Tang LY (2011), Tang LY (2011), Dupont S (2009), Dupont S (2009), Pardali K (2000), Kardassis D (2000), Xu L (2003), Fu G (2011), Chen W (2007), Kang JM (2012), Gao S (2009), Li H (2009), Li H (2009), Brown KA (2008), Brown KA (2008), Halder SK (2005), Barrios-Rodiles M (2005), Dai F (2007), Dai F (2007), Chacko BM (2004), Chacko BM (2004), Chacko BM (2004), Stroschein SL (1999), Stroschein SL (1999), Stroschein SL (1999), Wu RY (1997), Wu RY (1997), Wu RY (1997), Wu RY (1997), Tomita M (2004), Colland F (2004), Colland F (2004), Tang Y (2003), Ding L (2009), Fattet L (2013), Wang J (2011), Xue J (2014), Ali A (2013), Gao S (2009), Yamakawa N (2002), Yamakawa N (2002), Wang G (2005), Li X (2015), Zhou F (2014), Yang Y (2015), Yan X (2016), Yan X (2016), Wu Y (2017), Wu Y (2017)	60
TCF12	14	SMAD3	1	affinity chromatography technology	Yoon SJ (2011)	1
TRIM33	4	SSBP4	0	affinity chromatography technology	Bai X (2010)	1
SOX2	4	XPO1	8	pull down	Baltus GA (2009)	1
JUN	0	UBE2I	0	two hybrid, enzymatic study	Goettlicher M (1996), Muller S (2000)	2
TAL1	0	SUPT16H	4	affinity chromatography technology, affinity chromatography technology	Bai X (2010), Bai X (2010)	2
TCF4	26	TRIM24	1	affinity chromatography technology	Li X (2015)	1
ELAVL1	0	SUPT16H	4	affinity chromatography technology	Abdelmohsen K (2009)	1
ACY1	0	TRIM33	4	affinity chromatography technology	Huttlin EL (2017)	1
MAPK6	1	FGA	5	affinity chromatography technology	Huttlin EL (2017)	1
NANOG	0	TCF4	26	affinity chromatography technology	Oliviero G (2015)	1
CUL3	17	ELAVL1	0	affinity chromatography technology	Bennett EJ (2010)	1
NANOG	0	SOX2	4	affinity chromatography technology	Oliviero G (2015)	1
LMO2	2	SSBP3	7	affinity chromatography technology	Huttlin EL (2017)	1
SEM1	0	PSME3	0	affinity chromatography technology	Besche HC (2014)	1
TAL1	0	TCF12	14	affinity chromatography technology, affinity chromatography technology	Goardon N (2006), Hu X (2009)	2
CDC20	1	ANAPC7	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Nilsson J (2008), Townsend K (2009), Townsend K (2009), Townsend K (2009), Sedgwick GG (2012), Fogeron ML (2013), Hein JB (2014), Vodermaier HC (2003), Kelly A (2014), Craney A (2016), Craney A (2016), Qiao R (2016), Hein JB (2016)	13
NLGN3	3	QPRT	2	two hybrid, affinity chromatography technology	Shen C (2015), Shen C (2015)	2
TAL1	0	RUNX1	0	affinity chromatography technology	Hu X (2009)	1
CTNNB1	30	ELAVL1	0	pull down	Kim I (2012)	1
CCNA2	1	FZR1	1	pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology	Mateo F (2009), Jin L (2008), Mateo F (2009), Mateo F (2009), Huttlin EL (2015), Williamson A (2011), Huttlin EL (2017), Choudhury R (2016)	8
SKIL	3	TRIM33	4	affinity chromatography technology, affinity chromatography technology	Ikeuchi Y (2014), Ikeuchi Y (2014)	2
ZNF324B	1	TRIM33	4	affinity chromatography technology	Huttlin EL (2017)	1
SKIL	3	SMAD2	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology	Stroschein SL (2001), Stroschein SL (1999), Tan R (2006), Mizuide M (2003), Brown KA (2008), Colland F (2004), Colland F (2004), He J (2003), Ikeuchi Y (2014)	9
UBE2I	0	SSRP1	1	enzymatic study	Gocke CB (2005)	1
ERG	1	CUL3	17	affinity chromatography technology	Gan W (2015)	1
TRIM33	4	HIST1H3A	3	unspecified method	Xi Q (2011)	1
ANAPC4	0	ANAPC7	2	affinity chromatography technology, biochemical, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Mansfeld J (2011), Havugimana PC (2012), Zhang Z (2012), Chang L (2014), Sedgwick GG (2013), Vodermaier HC (2003), Chang L (2015), Yamaguchi M (2015), Wan C (2015), Sedgwick GG (2016)	10
SMAD3	1	CDC16	2	affinity chromatography technology	Stroschein SL (2001)	1
TRIM33	4	SSRP1	1	affinity chromatography technology	Bai X (2010)	1
BUB1B	0	ANAPC4	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hutchins JR (2010), Mansfeld J (2011), Izawa D (2011), Sedgwick GG (2012), Hein JB (2014), Di Fiore B (2015), Voets E (2015), Tipton AR (2013), Boekhout M (2015), Boekhout M (2015), Sedgwick GG (2016), Izawa D (2012), Salsi V (2016)	13
SMAD3	1	SKIL	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Stroschein SL (2001), Stroschein SL (2001), Stroschein SL (1999), Liberati NT (2001), Tan R (2006), Mizuide M (2003), Colland F (2004), He J (2003), Jinnin M (2007), Jinnin M (2007)	10
KLHL20	2	TRIM33	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
TRIM33	4	SUPT16H	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bai X (2010), Bai X (2010), Bai X (2010)	3
UBE2N	1	TRIM25	5	two hybrid, pull down, x-ray crystallography, affinity chromatography technology	Markson G (2009), Sanchez JG (2016), Sanchez JG (2016), Choudhury NR (2017)	4
FZR1	1	CDC23	3	unspecified method, affinity chromatography technology, affinity chromatography technology	Vodermaier HC (2003), Hein MY (2015), Huttlin EL (2017)	3
SEM1	0	TRIM33	4	affinity chromatography technology	Zhang Y (2014)	1
CDK9	3	RFC4	1	affinity chromatography technology	Jeronimo C (2007)	1
TRIM33	4	SSBP2	2	affinity chromatography technology	Bai X (2010)	1
FZR1	1	CDC16	2	unspecified method, affinity chromatography technology, affinity chromatography technology	Vodermaier HC (2003), Hein MY (2015), Huttlin EL (2017)	3
ANAPC1	1	CDC16	2	biochemical, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology	Sumara I (2000), Hutchins JR (2010), Havugimana PC (2012), Wan C (2015), Hein MY (2015), Huttlin EL (2017)	6
EWSR1	2	RFC4	1	bioid	Elzi DJ (2014)	1
SOX2	4	FZR1	1	affinity chromatography technology, enzymatic study	Fukushima H (2013), Fukushima H (2013)	2
TRIM25	5	ANAPC7	2	affinity chromatography technology	Choudhury NR (2017)	1
ELAVL1	0	EPAS1	6	affinity chromatography technology	Abdelmohsen K (2009)	1
MTA1	3	JUN	0	pull down	Li DQ (2011)	1
QPRT	2	TRIM24	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
XPO1	8	TCF12	14	affinity chromatography technology	Kirli K (2015)	1
FOXA1	2	TRIM33	4	affinity chromatography technology	Jozwik KM (2016)	1
NANOG	0	SMAD4	9	affinity chromatography technology	Oliviero G (2015)	1
TRIM33	4	CRYAB	0	affinity chromatography technology, affinity chromatography technology	Bellaye PS (2014), Bellaye PS (2014)	2
TRIM25	5	SMAD4	9	affinity chromatography technology	Choudhury NR (2017)	1
NTRK1	1	CHD1L	5	affinity chromatography technology	Emdal KB (2015)	1
NANOG	0	SUPT16H	4	affinity chromatography technology	Oliviero G (2015)	1
ANAPC1	1	TRIM33	4	affinity chromatography technology	Sedgwick GG (2012)	1
SOX2	4	SUPT16H	4	affinity chromatography technology	Engelen E (2011)	1
TRIM33	4	CBFA2T3	3	affinity chromatography technology	Bai X (2010)	1
KLHL20	2	CUL3	17	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology	Lee YR (2010), Bennett EJ (2010), Yuan WC (2014), Chen HY (2015), Chen HY (2015), Huttlin EL (2017)	6
TRIM33	4	C17orf53	4	affinity chromatography technology	Hein MY (2015)	1
ANAPC5	2	CDC23	3	biochemical, affinity chromatography technology	Havugimana PC (2012), Hein MY (2015)	2
TRIM33	4	TCF3	7	affinity chromatography technology	Bai X (2010)	1
XPO1	8	BUB1B	0	affinity chromatography technology	Kirli K (2015)	1
CUL3	17	EWSR1	2	affinity chromatography technology	Bennett EJ (2010)	1
SOX2	4	TCF12	14	affinity chromatography technology	Cox JL (2013)	1
CDC23	3	ANAPC7	2	biochemical, affinity chromatography technology, affinity chromatography technology	Wan C (2015), Hein MY (2015), Boldt K (2016)	3
NANOG	0	SSBP3	7	affinity chromatography technology	Oliviero G (2015)	1
ANAPC4	0	TRIM33	4	affinity chromatography technology	Sedgwick GG (2012)	1
SMAD4	9	NCOR1	9	affinity chromatography technology	He J (2003)	1
NANOG	0	ANAPC4	0	affinity chromatography technology	Oliviero G (2015)	1
SMAD2	5	JUN	0	affinity chromatography technology, pull down	Pessah M (2001), Miyamoto-Sato E (2010)	2
NTRK1	1	TCF12	14	affinity chromatography technology	Emdal KB (2015)	1
LDB1	2	CBFA2T3	3	affinity chromatography technology, affinity chromatography technology	Goardon N (2006), Goardon N (2006)	2
TRIM25	5	TRIM33	4	affinity chromatography technology	Choudhury NR (2017)	1
TRIM33	4	RRM1	3	affinity chromatography technology	Hein MY (2015)	1
EPAS1	6	XPO1	8	affinity chromatography technology	Steunou AL (2012)	1
SOX2	4	RUNX1	0	affinity chromatography technology	Cox JL (2013)	1
DCAF15	3	TRIM33	4	affinity chromatography technology	Huttlin EL (2015)	1
NTRK1	1	ELAVL1	0	affinity chromatography technology	Emdal KB (2015)	1
FZR1	1	BUB1B	0	enzymatic study, pull down	Tian W (2012), Diaz-Martinez LA (2015)	2
TRIM25	5	EPAS1	6	affinity chromatography technology	Choudhury NR (2017)	1
NTRK1	1	ANAPC1	1	affinity chromatography technology	Emdal KB (2015)	1
CDK9	3	RUNX1	0	genetic interference	Shen JP (2017)	1
SKIL	3	UBE2I	0	two hybrid	Colland F (2004)	1
XPO1	8	SMAD4	9	affinity chromatography technology	Kirli K (2015)	1
UBE2I	0	ZBTB1	4	enzymatic study	Matic I (2010)	1
MAPK6	1	ANAPC5	2	two hybrid	Vinayagam A (2011)	1
CDK9	3	SMAD2	5	enzymatic study	Alarcon C (2009)	1
EPAS1	6	KLHL20	2	two hybrid, two hybrid, affinity chromatography technology	Higashimura Y (2011), Higashimura Y (2011), Higashimura Y (2011)	3
CRYAB	0	CDC23	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
FOXI1	1	TRIM24	1	affinity chromatography technology	Li X (2015)	1
NTRK1	1	VDAC2	1	affinity chromatography technology	Emdal KB (2015)	1
TRIM33	4	TRIM24	1	affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology	Peng H (2002), Peng H (2002), Peng H (2002), Peng H (2002), Jain AK (2014), Hein MY (2015)	6
FZR1	1	TRIM33	4	affinity chromatography technology	Sedgwick GG (2012)	1
RUNX1T1	1	TCF3	7	affinity chromatography technology	Zhang J (2004)	1
LHX6	1	TRIM33	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CTNNB1	30	TCF4	26	pull down, affinity chromatography technology, x-ray crystallography, pull down, pull down, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Fasolini M (2003), Li Q (2004), Poy F (2001), Iguchi H (2007), Notani D (2010), Tran H (2008), Sanchez-Tillo E (2011), Selbach M (2006), Hamada F (2004), Hamada F (2004), Ponce E (2014), Wu B (2013), Wu B (2013), Yamamoto H (2003), Xu X (2014), Levy L (2004), Levy L (2004), Levy L (2004), Wang H (2008), Jansson EA (2005), Kotlyar M (2015), Zhu Z (2014), Lu D (2012), Lu D (2012), Lee HK (2007)	25
SMAD4	9	CNKSR1	2	two hybrid	Colland F (2004)	1