PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000378454	[[24171983, 24175062], [24178557, 24178860], [24205229, 24205330], [24278276, 24278439], [24289079, 24289134], [24291159, 24291306], [24301942, 24302074], [24302195, 24302272], [24353796, 24353851], [24357685, 24358280]]	[[24174957, 24175062], [24178557, 24178860], [24205229, 24205330], [24278276, 24278439], [24289079, 24289134], [24291159, 24291306], [24301942, 24302074], [24302195, 24302272], [24353796, 24353851], [24357685, 24357978]]
ENST00000378450	[[24171983, 24175062], [24178557, 24178860], [24205229, 24205531]]	[[24174957, 24175062], [24178557, 24178860], [24205229, 24205511]]
ENST00000436313	[[24353459, 24353547], [24353796, 24353851], [24357685, 24357881]]	[[24353532, 24353547], [24353796, 24353851], [24357685, 24357881]]
NM_016356	[[24171982, 24175062], [24178557, 24178860], [24205229, 24205330], [24278276, 24278439], [24289079, 24289134], [24291159, 24291306], [24301942, 24302074], [24302195, 24302272], [24353796, 24353851], [24357685, 24358280]]	[[24174957, 24175062], [24178557, 24178860], [24205229, 24205330], [24278276, 24278439], [24289079, 24289134], [24291159, 24291306], [24301942, 24302074], [24302195, 24302272], [24353796, 24353851], [24357685, 24357978]]
NM_001195610	[[24171982, 24175062], [24178557, 24178860], [24205229, 24205330], [24278276, 24278439], [24289079, 24289134], [24291159, 24291306], [24301942, 24302074], [24302195, 24302272], [24353796, 24353851], [24357685, 24358075], [24383408, 24383520]]	[[24174957, 24175062], [24178557, 24178860], [24205229, 24205330], [24278276, 24278439], [24289079, 24289134], [24291159, 24291306], [24301942, 24302074], [24302195, 24302272], [24353796, 24353851], [24357685, 24357978]]

Promoter

Chrom	Start	End	Description
chr6	24358088	24358099	CAGE_peak_5_at_DCDC2_5end
chr6	24358114	24358125	CAGE_peak_4_at_DCDC2_5end
chr6	24358146	24358176	CAGE_peak_1_at_DCDC2_5end
chr6	24358196	24358199	CAGE_peak_8_at_DCDC2_5end
chr6	24358226	24358239	CAGE_peak_3_at_DCDC2_5end
chr6	24358264	24358295	CAGE_peak_2_at_DCDC2_5end
chr6	24358302	24358309	CAGE_peak_6_at_DCDC2_5end
chr6	24358328	24358339	CAGE_peak_7_at_DCDC2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I024399	24399304	24404562	2.26	[{'connected_gene': 'MRS2', 'score': 588.36}, {'connected_gene': 'PIR56278', 'score': 550.77}, {'connected_gene': 'ALDH5A1', 'score': 13.95}, {'connected_gene': 'DCDC2', 'score': 0.37}]
chr6	GH06I024385	24385397	24386213	1.11	[{'connected_gene': 'MRS2', 'score': 5.85}, {'connected_gene': 'DCDC2', 'score': 0.77}]
chr6	GH06I024685	24685943	24686180	0.22	[{'connected_gene': 'TDP2', 'score': 12.66}, {'connected_gene': 'KIAA0319', 'score': 10.48}, {'connected_gene': 'DCDC2', 'score': 5.44}, {'connected_gene': 'ENSG00000272345', 'score': 0.37}, {'connected_gene': 'ACOT13', 'score': 0.37}]
chr6	GH06I024382	24382062	24384050	1	[{'connected_gene': 'DCDC2', 'score': 550.77}, {'connected_gene': 'MRS2', 'score': 5.92}, {'connected_gene': 'RNU6-391P', 'score': 0.37}]
chr6	GH06I024357	24357038	24358640	1.69	[{'connected_gene': 'DCDC2', 'score': 555.53}, {'connected_gene': 'KAAG1', 'score': 550.77}, {'connected_gene': 'GC06P024361', 'score': 0.77}]
chr6	GH06I024312	24312534	24314663	1.34	[{'connected_gene': 'DCDC2', 'score': 16.77}, {'connected_gene': 'KAAG1', 'score': 7.12}, {'connected_gene': 'ENSG00000251830', 'score': 0.11}]
chr6	GH06I024331	24331958	24333326	0.49	[{'connected_gene': 'DCDC2', 'score': 5.38}, {'connected_gene': 'KAAG1', 'score': 0.34}, {'connected_gene': 'ENSG00000251830', 'score': 0.1}]
chr6	GH06I024348	24348440	24348692	0.22	[{'connected_gene': 'DCDC2', 'score': 5.83}, {'connected_gene': 'KAAG1', 'score': 2.05}, {'connected_gene': 'ENSG00000251830', 'score': 0.09}]
chr6	GH06I024321	24321514	24324833	1.09	[{'connected_gene': 'DCDC2', 'score': 12.68}, {'connected_gene': 'RNU6-391P', 'score': 11.05}, {'connected_gene': 'MRS2', 'score': 5.56}, {'connected_gene': 'KAAG1', 'score': 5.38}, {'connected_gene': 'ENSG00000251830', 'score': 0.1}]
chr6	GH06I024341	24341273	24341462	1.15	[{'connected_gene': 'KAAG1', 'score': 6.24}, {'connected_gene': 'DCDC2', 'score': 4.46}, {'connected_gene': 'ENSG00000251830', 'score': 0.1}]
chr6	GH06I024394	24394624	24395749	0.88	[{'connected_gene': 'RNU6-391P', 'score': 11.35}, {'connected_gene': 'MRS2', 'score': 0.44}, {'connected_gene': 'DCDC2', 'score': 0.39}]
chr6	GH06I024389	24389393	24389522	0.74	[{'connected_gene': 'RNU6-391P', 'score': 12.06}, {'connected_gene': 'DCDC2', 'score': 0.44}, {'connected_gene': 'MRS2', 'score': 0.39}]
chr6	GH06I024282	24282801	24284356	1.13	[{'connected_gene': 'RNU6-391P', 'score': 10.96}, {'connected_gene': 'KAAG1', 'score': 0.19}, {'connected_gene': 'DCDC2', 'score': 0.15}, {'connected_gene': 'ENSG00000251830', 'score': 0.13}]
chr6	GH06I024799	24799585	24799976	0.7	[{'connected_gene': 'C6orf229', 'score': 550.77}, {'connected_gene': 'GMNN', 'score': 5.72}, {'connected_gene': 'ALDH5A1', 'score': 3.28}, {'connected_gene': 'DCDC2', 'score': 3.18}, {'connected_gene': 'GPLD1', 'score': 1.58}, {'connected_gene': 'ENSG00000282804', 'score': 0.39}]
chr6	GH06I024359	24359588	24360960	1.18	[{'connected_gene': 'GC06P024361', 'score': 550.77}, {'connected_gene': 'MRS2', 'score': 14.54}, {'connected_gene': 'KAAG1', 'score': 0.77}, {'connected_gene': 'DCDC2', 'score': 0.34}]
chr6	GH06I024251	24251249	24252845	0.43	[{'connected_gene': 'ENSG00000251830', 'score': 0.17}, {'connected_gene': 'KAAG1', 'score': 0.15}, {'connected_gene': 'DCDC2', 'score': 0.12}]
chr6	GH06I024228	24228699	24229400	1.01	[{'connected_gene': 'ENSG00000251830', 'score': 0.21}, {'connected_gene': 'KAAG1', 'score': 0.13}, {'connected_gene': 'DCDC2', 'score': 0.1}]
chr6	GH06I024363	24363655	24363683	0.22	[{'connected_gene': 'GC06P024366', 'score': 550.77}, {'connected_gene': 'RNU6-391P', 'score': 550.77}, {'connected_gene': 'GPLD1', 'score': 3.04}, {'connected_gene': 'GC06P024361', 'score': 0.77}, {'connected_gene': 'DCDC2', 'score': 0.37}]