PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000282096	[[14665268, 14666599], [14793482, 14793533], [14807982, 14808231], [14810651, 14810788], [14825489, 14825596], [14839728, 14839939], [14840681, 14840755], [14852243, 14852392], [14853185, 14853323], [14854267, 14854379], [14856527, 14856641], [14865372, 14865572], [14880588, 14880792], [14882750, 14882912], [14889051, 14889304], [14891006, 14892350]]	[[14665621, 14666599], [14793482, 14793533], [14807982, 14808231], [14810651, 14810788], [14825489, 14825596], [14839728, 14839939], [14840681, 14840755], [14852243, 14852392], [14853185, 14853323], [14854267, 14854379], [14856527, 14856641], [14865372, 14865572], [14880588, 14880792], [14882750, 14882912], [14889051, 14889304], [14891006, 14891206]]
ENST00000455098	[[14665376, 14666599], [14793482, 14793533], [14807982, 14808078], [14810651, 14810788], [14825489, 14825596], [14839728, 14839939], [14840681, 14840755], [14852243, 14852392], [14853185, 14853323], [14854267, 14854379], [14856527, 14856641], [14865372, 14865572], [14880588, 14880792], [14882750, 14882912], [14889051, 14889304], [14891006, 14891440]]	[[14665621, 14666599], [14793482, 14793533], [14807982, 14808078], [14810651, 14810788], [14825489, 14825596], [14839728, 14839939], [14840681, 14840755], [14852243, 14852392], [14853185, 14853323], [14854267, 14854379], [14856527, 14856641], [14865372, 14865572], [14880588, 14880792], [14882750, 14882912], [14889051, 14889304], [14891006, 14891206]]
ENST00000534317	[[14665805, 14666599], [14793482, 14798209]]	None
ENST00000525439	[[14810484, 14810788], [14825489, 14825596], [14839728, 14839939], [14840681, 14840752]]	None
ENST00000532740	[[14720384, 14720899], [14722199, 14722472]]	None
NM_000922	[[14665268, 14666599], [14793482, 14793533], [14807982, 14808231], [14810651, 14810788], [14825489, 14825596], [14839728, 14839939], [14840681, 14840755], [14852243, 14852392], [14853185, 14853323], [14854267, 14854379], [14856527, 14856641], [14865372, 14865572], [14880588, 14880792], [14882750, 14882912], [14889051, 14889304], [14891006, 14893605]]	[[14665621, 14666599], [14793482, 14793533], [14807982, 14808231], [14810651, 14810788], [14825489, 14825596], [14839728, 14839939], [14840681, 14840755], [14852243, 14852392], [14853185, 14853323], [14854267, 14854379], [14856527, 14856641], [14865372, 14865572], [14880588, 14880792], [14882750, 14882912], [14889051, 14889304], [14891006, 14891206]]

Promoter

Chrom	Start	End	Description
chr11	14665263	14665274	CAGE_peak_5_at_PDE3B_5end
chr11	14665275	14665316	CAGE_peak_2_at_PDE3B_5end
chr11	14665329	14665356	CAGE_peak_1_at_PDE3B_5end
chr11	14665373	14665380	CAGE_peak_7_at_PDE3B_5end
chr11	14665396	14665407	CAGE_peak_3_at_PDE3B_5end
chr11	14665414	14665432	CAGE_peak_4_at_PDE3B_5end
chr11	14665756	14665781	CAGE_peak_9_at_PDE3B_5end
chr11	14665997	14666029	CAGE_peak_8_at_PDE3B_5end
chr11	14666177	14666184	CAGE_peak_18_at_PDE3B_5end
chr11	14666201	14666212	CAGE_peak_12_at_PDE3B_5end
chr11	14666236	14666249	CAGE_peak_10_at_PDE3B_5end
chr11	14666266	14666281	CAGE_peak_6_at_PDE3B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I014783	14783846	14784727	0.2	[{'connected_gene': 'CALCP', 'score': 12.03}, {'connected_gene': 'CALCB', 'score': 12.03}, {'connected_gene': 'SPON1', 'score': 5.83}, {'connected_gene': 'MORF4L1P3', 'score': 0.14}, {'connected_gene': 'GC11P014892', 'score': 0.14}, {'connected_gene': 'PDE3B', 'score': 0.11}]
chr11	GH11I014764	14764176	14765944	1.13	[{'connected_gene': 'PSMA1', 'score': 11.78}, {'connected_gene': 'PDE3B', 'score': 11.78}, {'connected_gene': 'MORF4L1P3', 'score': 0.16}, {'connected_gene': 'GC11P014892', 'score': 0.13}]
chr11	GH11I014668	14668016	14671961	0.82	[{'connected_gene': 'PSMA1', 'score': 11.54}, {'connected_gene': 'PDE3B', 'score': 11.54}, {'connected_gene': 'COPB1', 'score': 6.51}, {'connected_gene': 'MORF4L1P3', 'score': 0.77}]
chr11	GH11I014642	14642378	14646744	2.2	[{'connected_gene': 'PSMA1', 'score': 550.77}, {'connected_gene': 'PDE3B', 'score': 550.77}, {'connected_gene': 'COPB1', 'score': 17.78}, {'connected_gene': 'MORF4L1P3', 'score': 0.31}]
chr11	GH11I014540	14540001	14540800	0.85	[{'connected_gene': 'PSMA1', 'score': 12.15}, {'connected_gene': 'PDE3B', 'score': 12.15}, {'connected_gene': 'COPB1', 'score': 11.25}, {'connected_gene': 'RRAS2', 'score': 4.22}, {'connected_gene': 'ENSG00000256206', 'score': 0.34}, {'connected_gene': 'PIR39085', 'score': 0.22}]
chr11	GH11I014536	14536802	14538799	1.1	[{'connected_gene': 'PSMA1', 'score': 13.29}, {'connected_gene': 'PDE3B', 'score': 12.15}, {'connected_gene': 'COPB1', 'score': 11.27}, {'connected_gene': 'ENSG00000256206', 'score': 0.37}, {'connected_gene': 'PIR39085', 'score': 0.21}]
chr11	GH11I014541	14541002	14542000	0.91	[{'connected_gene': 'PSMA1', 'score': 12.15}, {'connected_gene': 'PDE3B', 'score': 12.15}, {'connected_gene': 'COPB1', 'score': 11.25}, {'connected_gene': 'ENSG00000256206', 'score': 0.34}, {'connected_gene': 'PIR39085', 'score': 0.22}]
chr11	GH11I014618	14618913	14620897	1.06	[{'connected_gene': 'PSMA1', 'score': 11.75}, {'connected_gene': 'PDE3B', 'score': 11.75}, {'connected_gene': 'COPB1', 'score': 6.18}, {'connected_gene': 'PIR39085', 'score': 0.37}]
chr11	GH11I014617	14617204	14618613	0.87	[{'connected_gene': 'PSMA1', 'score': 11.72}, {'connected_gene': 'PDE3B', 'score': 11.72}, {'connected_gene': 'COPB1', 'score': 6.61}, {'connected_gene': 'PIR39085', 'score': 0.37}]
chr11	GH11I014543	14543376	14543587	0.27	[{'connected_gene': 'PSMA1', 'score': 13.1}, {'connected_gene': 'PDE3B', 'score': 11.87}, {'connected_gene': 'ENSG00000256206', 'score': 0.34}, {'connected_gene': 'PIR39085', 'score': 0.22}]
chr11	GH11I014542	14542201	14543200	0.2	[{'connected_gene': 'PSMA1', 'score': 11.87}, {'connected_gene': 'PDE3B', 'score': 11.87}, {'connected_gene': 'ENSG00000256206', 'score': 0.34}, {'connected_gene': 'PIR39085', 'score': 0.22}]
chr11	GH11I014566	14566179	14567528	0.59	[{'connected_gene': 'PSMA1', 'score': 11.02}, {'connected_gene': 'PDE3B', 'score': 11.02}, {'connected_gene': 'PIR39085', 'score': 0.29}, {'connected_gene': 'ENSG00000256206', 'score': 0.25}]
chr11	GH11I014544	14544001	14545001	0.98	[{'connected_gene': 'PSMA1', 'score': 11.88}, {'connected_gene': 'PDE3B', 'score': 11.88}, {'connected_gene': 'ENSG00000256206', 'score': 0.34}, {'connected_gene': 'PIR39085', 'score': 0.22}]
chr11	GH11I014611	14611601	14612224	0.6	[{'connected_gene': 'PSMA1', 'score': 11.92}, {'connected_gene': 'PDE3B', 'score': 11.92}, {'connected_gene': 'PIR39085', 'score': 0.39}]
chr11	GH11I014612	14612715	14612864	0.8	[{'connected_gene': 'PSMA1', 'score': 11.92}, {'connected_gene': 'PDE3B', 'score': 11.92}, {'connected_gene': 'PIR39085', 'score': 0.39}]
chr11	GH11I014613	14612955	14613104	0.49	[{'connected_gene': 'PSMA1', 'score': 11.92}, {'connected_gene': 'PDE3B', 'score': 11.92}, {'connected_gene': 'PIR39085', 'score': 0.39}]
chr11	GH11I014577	14577316	14581043	1.42	[{'connected_gene': 'PDE3B', 'score': 14.02}, {'connected_gene': 'PSMA1', 'score': 3.82}, {'connected_gene': 'CYP2R1', 'score': 1.86}, {'connected_gene': 'PIR39085', 'score': 0.34}, {'connected_gene': 'ENSG00000256206', 'score': 0.22}]
chr11	GH11I014648	14648801	14649200	0.63	[{'connected_gene': 'PDE3B', 'score': 0.44}, {'connected_gene': 'MORF4L1P3', 'score': 0.31}]
chr11	GH11I014657	14657175	14657324	1.11	[{'connected_gene': 'PDE3B', 'score': 0.39}, {'connected_gene': 'MORF4L1P3', 'score': 0.37}]
chr11	GH11I014649	14649401	14649800	0.58	[{'connected_gene': 'PDE3B', 'score': 0.44}, {'connected_gene': 'MORF4L1P3', 'score': 0.34}]
chr11	GH11I014672	14672109	14674217	0.31	[{'connected_gene': 'MORF4L1P3', 'score': 550.77}, {'connected_gene': 'PSMA1', 'score': 11.54}, {'connected_gene': 'PDE3B', 'score': 11.54}, {'connected_gene': 'CALCB', 'score': 4.94}, {'connected_gene': 'COPB1', 'score': 4.75}]
chr11	GH11I014768	14768723	14769297	0.59	[{'connected_gene': 'MORF4L1P3', 'score': 0.16}, {'connected_gene': 'PDE3B', 'score': 0.13}, {'connected_gene': 'GC11P014892', 'score': 0.13}]
chr11	GH11I014713	14713761	14714135	0.2	[{'connected_gene': 'MORF4L1P3', 'score': 0.28}, {'connected_gene': 'PDE3B', 'score': 0.19}, {'connected_gene': 'GC11P014892', 'score': 0.1}]
chr11	GH11I014647	14647801	14648400	0.51	[{'connected_gene': 'COPB1', 'score': 4.77}, {'connected_gene': 'PDE3B', 'score': 0.77}, {'connected_gene': 'MORF4L1P3', 'score': 0.31}]
chr11	GH11I014852	14852703	14853030	0.94	[{'connected_gene': 'CYP2R1', 'score': 6.35}, {'connected_gene': 'GC11P014892', 'score': 0.28}, {'connected_gene': 'MORF4L1P3', 'score': 0.1}, {'connected_gene': 'PDE3B', 'score': 0.08}]
chr11	GH11I014861	14861775	14861944	0.74	[{'connected_gene': 'GC11P014892', 'score': 0.29}, {'connected_gene': 'MORF4L1P3', 'score': 0.09}, {'connected_gene': 'PDE3B', 'score': 0.08}]