PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000556859	[[59100785, 59100903], [59107453, 59107586], [59108309, 59108465], [59112086, 59113918]]	[[59112184, 59113852]]
ENST00000395153	[[59104773, 59105265], [59107453, 59107586], [59108309, 59108465], [59112086, 59115039]]	[[59104920, 59105265], [59107453, 59107586], [59108309, 59108465], [59112086, 59113852]]
ENST00000335867	[[59104896, 59105265], [59107453, 59107586], [59108309, 59108465], [59111975, 59113888]]	[[59104920, 59105265], [59107453, 59107586], [59108309, 59108465], [59111975, 59113852]]
ENST00000541264	[[59105554, 59105980], [59107453, 59107586], [59108309, 59108465], [59112086, 59113981]]	[[59112184, 59113852]]
ENST00000555845	[[59100684, 59100903], [59107453, 59107586], [59108309, 59108465], [59112086, 59112190]]	None
ENST00000421793	[[59100798, 59100903], [59107453, 59107586], [59108309, 59108465], [59111975, 59112574]]	[[59112184, 59112574]]
NR_046093	[[59100785, 59100903], [59107453, 59107586], [59108309, 59108465], [59112086, 59115039]]	None
NM_001079520	[[59104756, 59105265], [59107453, 59107586], [59108309, 59108465], [59112086, 59115039]]	[[59104920, 59105265], [59107453, 59107586], [59108309, 59108465], [59112086, 59113852]]
NM_016651	[[59104756, 59105265], [59107453, 59107586], [59108309, 59108465], [59111975, 59115039]]	[[59104920, 59105265], [59107453, 59107586], [59108309, 59108465], [59111975, 59113852]]
NR_046095	[[59105554, 59105980], [59107453, 59107586], [59108309, 59108465], [59112086, 59115039]]	None

Promoter

Chrom	Start	End	Description
chr14	59100774	59100790	CAGE_peak_8_at_DACT1_5end
chr14	59104560	59104571	CAGE_peak_4_at_DACT1_5end
chr14	59104664	59104735	CAGE_peak_1_at_DACT1_5end
chr14	59104741	59104752	CAGE_peak_3_at_DACT1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I058966	58966697	58967419	0.63	[{'connected_gene': 'DACT1', 'score': 10.11}, {'connected_gene': 'LOC440181', 'score': 0.12}, {'connected_gene': 'LINC01500', 'score': 0.12}, {'connected_gene': 'GC14M059001', 'score': 0.1}]
chr14	GH14I058532	58532983	58535639	1.09	[{'connected_gene': 'DACT1', 'score': 10.38}, {'connected_gene': 'PSMA3-AS1', 'score': 7.15}, {'connected_gene': 'HNRNPCP1', 'score': 5.71}, {'connected_gene': 'GC14P058521', 'score': 0.39}, {'connected_gene': 'RPL9P5', 'score': 0.31}, {'connected_gene': 'KIAA0586', 'score': 0.14}]
chr14	GH14I058730	58730384	58732867	0.82	[{'connected_gene': 'DACT1', 'score': 10.84}, {'connected_gene': 'LOC102723725', 'score': 0.37}, {'connected_gene': 'GC14P058645', 'score': 0.17}]
chr14	GH14I058752	58752002	58753600	0.84	[{'connected_gene': 'DACT1', 'score': 10.11}, {'connected_gene': 'LOC102723725', 'score': 0.77}, {'connected_gene': 'GC14P058773', 'score': 0.34}]
chr14	GH14I058560	58560155	58560976	0.46	[{'connected_gene': 'DACT1', 'score': 10.76}, {'connected_gene': 'RPL9P5', 'score': 0.77}, {'connected_gene': 'GC14P058521', 'score': 0.28}]
chr14	GH14I058571	58571418	58572792	0.66	[{'connected_gene': 'DACT1', 'score': 10.92}, {'connected_gene': 'GC14P058566', 'score': 0.44}, {'connected_gene': 'GC14M058593', 'score': 0.31}]
chr14	GH14I058636	58636484	58640640	1.93	[{'connected_gene': 'DACT1', 'score': 550.77}, {'connected_gene': 'PIR35115', 'score': 550.77}]
chr14	GH14I058608	58608023	58608124	0.2	[{'connected_gene': 'DACT1', 'score': 11.02}, {'connected_gene': 'GC14P058601', 'score': 0.44}]
chr14	GH14I058627	58627383	58628114	0.2	[{'connected_gene': 'DACT1', 'score': 0.44}, {'connected_gene': 'GC14P058601', 'score': 0.31}]
chr14	GH14I058607	58607343	58607492	0.31	[{'connected_gene': 'DACT1', 'score': 11.02}, {'connected_gene': 'GC14P058601', 'score': 0.44}]
chr14	GH14I058619	58619914	58620464	0.2	[{'connected_gene': 'DACT1', 'score': 0.39}, {'connected_gene': 'GC14P058601', 'score': 0.37}]
chr14	GH14I058624	58624930	58626578	0.49	[{'connected_gene': 'DACT1', 'score': 0.44}, {'connected_gene': 'GC14P058601', 'score': 0.34}]
chr14	GH14I058628	58628453	58629192	0.31	[{'connected_gene': 'DACT1', 'score': 0.44}, {'connected_gene': 'GC14P058601', 'score': 0.31}]
chr14	GH14I058626	58626583	58626732	0.49	[{'connected_gene': 'DACT1', 'score': 0.44}, {'connected_gene': 'GC14P058601', 'score': 0.31}]
chr14	GH14I058633	58633388	58635991	0.79	[{'connected_gene': 'DACT1', 'score': 550.77}, {'connected_gene': 'PIR35115', 'score': 0.44}]
chr14	GH14I059127	59127263	59127412	0.65	[{'connected_gene': 'DAAM1', 'score': 11.17}, {'connected_gene': 'GPR135', 'score': 11.03}, {'connected_gene': 'DACT1', 'score': 8.97}, {'connected_gene': 'GC14M059136', 'score': 0.44}, {'connected_gene': 'GC14M059001', 'score': 0.44}]
chr14	GH14I058746	58746179	58748031	0.94	[{'connected_gene': 'LOC102723725', 'score': 550.77}, {'connected_gene': 'DACT1', 'score': 10.13}, {'connected_gene': 'GC14P058645', 'score': 0.15}]
chr14	GH14I058238	58238020	58240999	1.6	[{'connected_gene': 'TRK-CTT1-1', 'score': 550.77}, {'connected_gene': 'ARID4A', 'score': 12.77}, {'connected_gene': 'DACT1', 'score': 12.75}, {'connected_gene': 'KIAA0586', 'score': 10.26}, {'connected_gene': 'ENSG00000258682', 'score': 7.5}, {'connected_gene': 'PSMA3-AS1', 'score': 7.34}, {'connected_gene': 'C14orf37', 'score': 5.44}, {'connected_gene': 'ACTR10', 'score': 0.28}, {'connected_gene': 'GC14P058110', 'score': 0.13}]
chr14	GH14I058660	58659840	58660815	0.64	[{'connected_gene': 'ENSG00000258682', 'score': 46.03}, {'connected_gene': 'PSMA3-AS1', 'score': 44.64}, {'connected_gene': 'KIAA0586', 'score': 42.92}, {'connected_gene': 'HMGB1P14', 'score': 38.35}, {'connected_gene': 'L3HYPDH', 'score': 32.36}, {'connected_gene': 'ARID4A', 'score': 18.86}, {'connected_gene': 'GPR135', 'score': 13.41}, {'connected_gene': 'TIMM9', 'score': 11.67}, {'connected_gene': 'DACT1', 'score': 10.48}, {'connected_gene': 'JKAMP', 'score': 10.13}, {'connected_gene': 'HNRNPCP1', 'score': 10.01}, {'connected_gene': 'ENSG00000259969', 'score': 9.7}, {'connected_gene': 'GC14P058645', 'score': 0.37}, {'connected_gene': 'LOC102723725', 'score': 0.17}]