PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000260803	[[137879853, 137881424], [137882190, 137882336], [137882619, 137882700], [137885922, 137886147], [137888948, 137889034], [137890474, 137890555], [137892343, 137892468], [137893440, 137893791]]	[[137880730, 137881424], [137882190, 137882336], [137882619, 137882700], [137885922, 137886147], [137888948, 137889034], [137890474, 137890555], [137892343, 137892468], [137893440, 137893637]]
ENST00000505015	[[137880214, 137881424], [137882190, 137882336], [137882619, 137882700], [137885922, 137886147], [137888948, 137889034], [137890474, 137890555], [137892343, 137892468], [137893440, 137893514], [137893566, 137893727]]	[[137880730, 137881424], [137882190, 137882336], [137882619, 137882700], [137885922, 137885934]]
ENST00000477557	[[137882190, 137882336], [137882619, 137882700], [137885922, 137886147], [137892343, 137892468], [137893440, 137893701]]	[[137886112, 137886147], [137892343, 137892468], [137893440, 137893637]]
ENST00000460271	[[137882190, 137882336], [137882619, 137883045]]	None
ENST00000463982	[[137890161, 137890310], [137890474, 137890555], [137892343, 137892468], [137893440, 137893708]]	None
NM_016216	[[137879829, 137881424], [137882190, 137882336], [137882619, 137882700], [137885922, 137886147], [137888948, 137889034], [137890474, 137890555], [137892343, 137892468], [137893440, 137893791]]	[[137880730, 137881424], [137882190, 137882336], [137882619, 137882700], [137885922, 137886147], [137888948, 137889034], [137890474, 137890555], [137892343, 137892468], [137893440, 137893637]]

Promoter

Chrom	Start	End	Description
chr3	137893698	137893710	CAGE_peak_2_at_DBR1_5end
chr3	137893721	137893795	CAGE_peak_1_at_DBR1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I138607	138607911	138610418	1.98	[{'connected_gene': 'FAIM', 'score': 568.34}, {'connected_gene': 'DBR1', 'score': 13.56}, {'connected_gene': 'DZIP1L', 'score': 10.32}, {'connected_gene': 'PPIAP72', 'score': 0.28}]
chr3	GH03I138767	138767150	138768613	0.76	[{'connected_gene': 'PIK3CB', 'score': 12.47}, {'connected_gene': 'DBR1', 'score': 11.47}, {'connected_gene': 'FAIM', 'score': 10.81}, {'connected_gene': 'CEP70', 'score': 10.68}, {'connected_gene': 'DZIP1L', 'score': 10.21}, {'connected_gene': 'ACTG1P1', 'score': 9.79}, {'connected_gene': 'COPB2', 'score': 9.65}, {'connected_gene': 'GAPDHP39', 'score': 0.44}, {'connected_gene': 'GC03P138644', 'score': 0.13}]
chr3	GH03I138860	138860777	138864579	1.73	[{'connected_gene': 'DBR1', 'score': 10.5}, {'connected_gene': 'COPB2', 'score': 10.28}, {'connected_gene': 'PIK3CB', 'score': 8.62}, {'connected_gene': 'FAIM', 'score': 8.15}, {'connected_gene': 'A4GNT', 'score': 4.47}, {'connected_gene': 'MRPS22', 'score': 2.34}, {'connected_gene': 'ATP5MC1P3', 'score': 0.31}]
chr3	GH03I138173	138173625	138175508	2.02	[{'connected_gene': 'DBR1', 'score': 569.05}, {'connected_gene': 'A4GNT', 'score': 38.45}]
chr3	GH03I138172	138172801	138173000	0.2	[{'connected_gene': 'DBR1', 'score': 0.77}, {'connected_gene': 'A4GNT', 'score': 0.26}]
chr3	GH03I138875	138875120	138877828	1.63	[{'connected_gene': 'DBR1', 'score': 18.48}, {'connected_gene': 'DZIP1L', 'score': 17.1}, {'connected_gene': 'ENSG00000272656', 'score': 11.16}, {'connected_gene': 'FAIM', 'score': 8.17}, {'connected_gene': 'ATP5MC1P3', 'score': 0.39}, {'connected_gene': 'PIK3CB', 'score': 0.26}]
chr3	GH03I138132	138132380	138132439	0.5	[{'connected_gene': 'A4GNT', 'score': 550.77}, {'connected_gene': 'DBR1', 'score': 0.26}]
chr3	GH03I138135	138135001	138137600	0.31	[{'connected_gene': 'A4GNT', 'score': 50.89}, {'connected_gene': 'DBR1', 'score': 7.1}]
chr3	GH03I138942	138942217	138948361	1.83	[{'connected_gene': 'FOXL2NB', 'score': 550.77}, {'connected_gene': 'LINC01391', 'score': 550.77}, {'connected_gene': 'FOXL2', 'score': 550.77}, {'connected_gene': 'DBR1', 'score': 28.08}, {'connected_gene': 'DZIP1L', 'score': 25.48}, {'connected_gene': 'ENSG00000272656', 'score': 11.16}, {'connected_gene': 'CEP70', 'score': 10.28}, {'connected_gene': 'ACTG1P1', 'score': 9.79}, {'connected_gene': 'COPB2', 'score': 9.67}, {'connected_gene': 'MRAS', 'score': 6.41}]
chr3	GH03I138281	138281444	138282854	0.38	[{'connected_gene': 'NME9', 'score': 11.78}, {'connected_gene': 'DBR1', 'score': 11.36}, {'connected_gene': 'DZIP1L', 'score': 10.47}, {'connected_gene': 'GC03P138286', 'score': 0.77}, {'connected_gene': 'ARMC8', 'score': 0.16}]
chr3	GH03I138221	138221801	138223000	0.51	[{'connected_gene': 'ARMC8', 'score': 12.3}, {'connected_gene': 'DBR1', 'score': 12.14}, {'connected_gene': 'MRAS', 'score': 10.32}, {'connected_gene': 'NME9', 'score': 10.3}, {'connected_gene': 'DZIP1L', 'score': 9.58}, {'connected_gene': 'GC03P138286', 'score': 0.21}]
chr3	GH03I138219	138219385	138219553	0.37	[{'connected_gene': 'ARMC8', 'score': 13.62}, {'connected_gene': 'DBR1', 'score': 12.16}, {'connected_gene': 'DZIP1L', 'score': 9.58}, {'connected_gene': 'GC03P138286', 'score': 0.2}]
chr3	GH03I138373	138373873	138379083	0.79	[{'connected_gene': 'MRAS', 'score': 40.01}, {'connected_gene': 'DBR1', 'score': 39.98}, {'connected_gene': 'DZIP1L', 'score': 29.25}, {'connected_gene': 'ENSG00000272656', 'score': 21.49}, {'connected_gene': 'NME9', 'score': 5.12}, {'connected_gene': 'GC03M138344', 'score': 0.31}, {'connected_gene': 'GC03P138407', 'score': 0.29}]