PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000367166	[[155578642, 155579216], [155581406, 155581534], [155606291, 155606411], [155618086, 155618238], [155619610, 155619719], [155632321, 155632473], [155635429, 155635618]]	[[155578969, 155579216], [155581406, 155581534], [155606291, 155606411], [155618086, 155618238], [155619610, 155619719], [155632321, 155632473], [155635429, 155635562]]
ENST00000468889	[[155578786, 155579042], [155581406, 155581534], [155606291, 155606411], [155618086, 155618203]]	None
ENST00000470239	[[155578806, 155579042], [155632465, 155632473], [155635429, 155635618]]	None
ENST00000495806	[[155579110, 155579216], [155581406, 155581702], [155606291, 155606333]]	None
ENST00000489874	[[155581956, 155582101], [155606291, 155606411], [155618086, 155618238], [155619610, 155619719], [155620639, 155620676]]	None
ENST00000487586	[[155618094, 155618238], [155619610, 155619719], [155624307, 155624632]]	None
ENST00000475849	[[155618214, 155618238], [155619610, 155619719], [155632321, 155632473], [155634271, 155634378], [155635429, 155635627]]	None
ENST00000480390	[[155631979, 155632473], [155635429, 155635584]]	None
ENST00000466349	[[155632310, 155632473], [155635250, 155635561]]	None
NM_016020	[[155577263, 155579216], [155581406, 155581534], [155606291, 155606411], [155618086, 155618238], [155619610, 155619719], [155632321, 155632473], [155635429, 155635617]]	[[155578969, 155579216], [155581406, 155581534], [155606291, 155606411], [155618086, 155618238], [155619610, 155619719], [155632321, 155632473], [155635429, 155635562]]

Promoter

Chrom	Start	End	Description
chr6	155635583	155635644	CAGE_peak_1_at_TFB1M_5end
chr6	155635647	155635658	CAGE_peak_2_at_TFB1M_5end
chr6	155635818	155635834	CAGE_peak_4_at_TFB1M_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I155340	155340525	155341801	0.85	[{'connected_gene': 'TFB1M', 'score': 11.01}, {'connected_gene': 'NOX3', 'score': 9.37}, {'connected_gene': 'GC06M155324', 'score': 0.34}, {'connected_gene': 'GC06P154934', 'score': 0.05}]
chr6	GH06I155212	155212120	155214025	0.38	[{'connected_gene': 'TFB1M', 'score': 6.77}, {'connected_gene': 'ENSG00000235381', 'score': 5.85}, {'connected_gene': 'TIAM2', 'score': 4.83}, {'connected_gene': 'LOC100421330', 'score': 0.08}, {'connected_gene': 'GC06P154934', 'score': 0.06}]
chr6	GH06I155312	155312924	155317016	2.32	[{'connected_gene': 'TFB1M', 'score': 568.32}, {'connected_gene': 'SCAF8', 'score': 35.66}, {'connected_gene': 'ENSG00000235381', 'score': 20.29}, {'connected_gene': 'TIAM2', 'score': 6.62}, {'connected_gene': 'GC06M155324', 'score': 0.25}, {'connected_gene': 'GC06P154934', 'score': 0.05}]
chr6	GH06I155348	155348881	155349998	0.2	[{'connected_gene': 'TFB1M', 'score': 11.26}, {'connected_gene': 'GC06M155324', 'score': 0.39}, {'connected_gene': 'GC06P154934', 'score': 0.05}]
chr6	GH06I155327	155327444	155330540	1.14	[{'connected_gene': 'TFB1M', 'score': 13.92}, {'connected_gene': 'ENSG00000235381', 'score': 5.52}, {'connected_gene': 'GC06M155324', 'score': 0.29}, {'connected_gene': 'GC06P154934', 'score': 0.05}]
chr6	GH06I155487	155487866	155488021	0.68	[{'connected_gene': 'NOX3', 'score': 11.58}, {'connected_gene': 'TFB1M', 'score': 2.19}, {'connected_gene': 'TIAM2', 'score': 1.68}, {'connected_gene': 'GC06P155491', 'score': 0.77}, {'connected_gene': 'GC06P155399', 'score': 0.17}]
chr6	GH06I155267	155267807	155268596	0.57	[{'connected_gene': 'CLDN20', 'score': 0.77}, {'connected_gene': 'TFB1M', 'score': 0.25}, {'connected_gene': 'GC06P154934', 'score': 0.06}]
chr6	GH06I155264	155264987	155265367	0.58	[{'connected_gene': 'CLDN20', 'score': 550.77}, {'connected_gene': 'ENSG00000235381', 'score': 11.31}, {'connected_gene': 'TIAM2', 'score': 11.28}, {'connected_gene': 'TFB1M', 'score': 0.25}, {'connected_gene': 'GC06P154934', 'score': 0.06}]
chr6	GH06I155261	155261493	155261929	0.49	[{'connected_gene': 'TIAM2', 'score': 6.29}, {'connected_gene': 'ENSG00000235381', 'score': 0.77}, {'connected_gene': 'CLDN20', 'score': 0.77}, {'connected_gene': 'TFB1M', 'score': 0.23}, {'connected_gene': 'GC06P154934', 'score': 0.05}]
chr6	GH06I155309	155309453	155311878	0.69	[{'connected_gene': 'ENSG00000235381', 'score': 19.84}, {'connected_gene': 'TFB1M', 'score': 9.06}, {'connected_gene': 'CLDN20', 'score': 0.25}, {'connected_gene': 'GC06P154934', 'score': 0.05}]
chr6	GH06I155319	155319601	155320400	0.43	[{'connected_gene': 'ENSG00000235381', 'score': 6.43}, {'connected_gene': 'TFB1M', 'score': 0.44}, {'connected_gene': 'GC06M155324', 'score': 0.26}, {'connected_gene': 'GC06P154934', 'score': 0.05}]
chr6	GH06I155352	155352927	155353076	0.31	[{'connected_gene': 'GC06M155324', 'score': 0.44}, {'connected_gene': 'TFB1M', 'score': 0.28}, {'connected_gene': 'GC06P154934', 'score': 0.05}]
chr6	GH06I155399	155399172	155399750	1.19	[{'connected_gene': 'GC06P155399', 'score': 550.77}, {'connected_gene': 'NOX3', 'score': 10.31}, {'connected_gene': 'TFB1M', 'score': 6.66}]
chr6	GH06I155271	155271912	155271985	0.59	[{'connected_gene': 'ENSG00000238963', 'score': 9.73}, {'connected_gene': 'CLDN20', 'score': 0.44}, {'connected_gene': 'TFB1M', 'score': 0.26}, {'connected_gene': 'GC06P154934', 'score': 0.05}]
chr6	GH06I155272	155272137	155275009	1	[{'connected_gene': 'ENSG00000235381', 'score': 37.56}, {'connected_gene': 'TIAM2', 'score': 11.28}, {'connected_gene': 'ENSG00000238963', 'score': 9.73}, {'connected_gene': 'TFB1M', 'score': 7.88}, {'connected_gene': 'CLDN20', 'score': 0.44}, {'connected_gene': 'GC06P154934', 'score': 0.05}]
chr6	GH06I155269	155269705	155271211	0.43	[{'connected_gene': 'ENSG00000235381', 'score': 22.09}, {'connected_gene': 'TIAM2', 'score': 10.24}, {'connected_gene': 'ENSG00000238963', 'score': 9.73}, {'connected_gene': 'TFB1M', 'score': 7.86}, {'connected_gene': 'CLDN20', 'score': 0.44}, {'connected_gene': 'GC06P154934', 'score': 0.05}]
chr6	GH06I155252	155252719	155254373	0.52	[{'connected_gene': 'ENSG00000235381', 'score': 36.39}, {'connected_gene': 'TIAM2', 'score': 11.3}, {'connected_gene': 'TFB1M', 'score': 0.21}, {'connected_gene': 'LOC100421330', 'score': 0.07}, {'connected_gene': 'GC06P154934', 'score': 0.06}]
chr6	GH06I155245	155245537	155249156	1.05	[{'connected_gene': 'ENSG00000235381', 'score': 36.91}, {'connected_gene': 'TIAM2', 'score': 11.32}, {'connected_gene': 'TFB1M', 'score': 0.2}, {'connected_gene': 'LOC100421330', 'score': 0.07}, {'connected_gene': 'GC06P154934', 'score': 0.06}]
chr6	GH06I155258	155258383	155260737	0.46	[{'connected_gene': 'ENSG00000235381', 'score': 37.96}, {'connected_gene': 'TIAM2', 'score': 11.41}, {'connected_gene': 'CLDN20', 'score': 0.77}, {'connected_gene': 'TFB1M', 'score': 0.23}, {'connected_gene': 'GC06P154934', 'score': 0.05}]