PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000494280	[[15792403, 15792639], [15793880, 15794033], [15802951, 15803040], [15807592, 15807690], [15808759, 15808888], [15809758, 15809863]]	None
ENST00000375910	[[15802595, 15802660], [15802951, 15803040], [15807592, 15807690], [15808759, 15808888], [15809758, 15809895], [15812395, 15812541], [15813779, 15813932], [15817789, 15817895]]	[[15802620, 15802660], [15802951, 15803040], [15807592, 15807690], [15808759, 15808888], [15809758, 15809895], [15812395, 15812541], [15813779, 15813932], [15817789, 15817807]]
ENST00000422901	[[15802959, 15803040], [15807592, 15807690], [15808139, 15808244], [15808759, 15808852]]	[[15802959, 15803040], [15807592, 15807690], [15808139, 15808244], [15808759, 15808852]]
ENST00000488764	[[15812355, 15812541], [15813779, 15813932], [15817789, 15817890]]	None
NM_015849	[[15802595, 15802660], [15802951, 15803040], [15807592, 15807690], [15808759, 15808888], [15809758, 15809895], [15812395, 15812541], [15813779, 15813932], [15817789, 15817895]]	[[15802620, 15802660], [15802951, 15803040], [15807592, 15807690], [15808759, 15808888], [15809758, 15809895], [15812395, 15812541], [15813779, 15813932], [15817789, 15817807]]

Promoter

Chrom	Start	End	Description
chr1	15792497	15792510	CAGE_peak_2_at_CELA2B_5end
chr1	15792576	15792580	CAGE_peak_5_at_CELA2B_5end
chr1	15792586	15792590	CAGE_peak_4_at_CELA2B_5end
chr1	15792609	15792616	CAGE_peak_3_at_CELA2B_5end
chr1	15802594	15802601	CAGE_peak_1_at_CELA2B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I015475	15474606	15475405	0.31	[{'connected_gene': 'CASP9', 'score': 11.25}, {'connected_gene': 'GC01P015468', 'score': 0.44}, {'connected_gene': 'CELA2B', 'score': 0.44}]
chr1	GH01I015458	15458846	15461161	1.1	[{'connected_gene': 'AGMAT', 'score': 4.73}, {'connected_gene': 'SLC25A34', 'score': 4.25}, {'connected_gene': 'CELA2A', 'score': 3.45}, {'connected_gene': 'CELA2B', 'score': 3.11}, {'connected_gene': 'CTRC', 'score': 2.56}, {'connected_gene': 'PLEKHM2', 'score': 1.97}, {'connected_gene': 'LOC105376767', 'score': 0.77}]
chr1	GH01I015469	15469519	15470487	0.38	[{'connected_gene': 'AGMAT', 'score': 9.19}, {'connected_gene': 'SLC25A34', 'score': 7.93}, {'connected_gene': 'GC01P015468', 'score': 0.77}, {'connected_gene': 'CELA2B', 'score': 0.77}, {'connected_gene': 'CELA2A', 'score': 0.39}, {'connected_gene': 'CASP9', 'score': 0.22}]
chr1	GH01I015488	15488369	15489835	0.38	[{'connected_gene': 'AGMAT', 'score': 21.78}, {'connected_gene': 'CTRC', 'score': 11.96}, {'connected_gene': 'LOC101927417', 'score': 10.99}, {'connected_gene': 'FHAD1', 'score': 10.95}, {'connected_gene': 'GC01P015468', 'score': 0.34}, {'connected_gene': 'CELA2B', 'score': 0.34}, {'connected_gene': 'CASP9', 'score': 0.28}]
chr1	GH01I015476	15475906	15476114	1.14	[{'connected_gene': 'CELA2B', 'score': 550.39}, {'connected_gene': 'GC01P015468', 'score': 0.44}, {'connected_gene': 'CASP9', 'score': 0.23}]
chr1	GH01I015462	15462640	15465551	1.04	[{'connected_gene': 'CELA2B', 'score': 550.77}, {'connected_gene': 'LOC105376767', 'score': 550.77}, {'connected_gene': 'CELA2A', 'score': 8.24}, {'connected_gene': 'SLC25A34', 'score': 5.7}]
chr1	GH01I015474	15474370	15474385	0.2	[{'connected_gene': 'GC01P015468', 'score': 0.44}, {'connected_gene': 'CELA2B', 'score': 0.44}, {'connected_gene': 'CASP9', 'score': 0.23}]