PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000436632	[[125560667, 125560818], [125585294, 125585476], [125588894, 125588965]]	[[125560797, 125560818], [125585294, 125585476], [125588894, 125588965]]
ENST00000259467	[[125580622, 125582915], [125585294, 125585476], [125588894, 125589071], [125590749, 125590910]]	[[125582363, 125582915], [125585294, 125585476], [125588894, 125589066]]
ENST00000394285	[[125582822, 125583098], [125585294, 125585476], [125588894, 125589031]]	[[125583089, 125583098], [125585294, 125585476], [125588894, 125589031]]
NM_005388	[[125580375, 125582915], [125585294, 125585476], [125588894, 125589071], [125590749, 125590935]]	[[125582363, 125582915], [125585294, 125585476], [125588894, 125589066]]

Promoter

Chrom	Start	End	Description
chr9	125590800	125590811	CAGE_peak_2_at_PDCL_5end
chr9	125590818	125590898	CAGE_peak_1_at_PDCL_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I122826	122826067	122829236	2.26	[{'connected_gene': 'PDCL', 'score': 550.77}, {'connected_gene': 'MORN5', 'score': 5.03}, {'connected_gene': 'STRBP', 'score': 4.21}, {'connected_gene': 'GC09M122816', 'score': 0.39}]
chr9	GH09I122809	122809382	122809551	0.46	[{'connected_gene': 'OR1K1', 'score': 0.44}, {'connected_gene': 'GC09M122816', 'score': 0.44}, {'connected_gene': 'PDCL', 'score': 0.37}]
chr9	GH09I122819	122819101	122822690	1.25	[{'connected_gene': 'OR1K1', 'score': 11.25}, {'connected_gene': 'OR5C1', 'score': 10.46}, {'connected_gene': 'SNORD90', 'score': 10.15}, {'connected_gene': 'GC09M122816', 'score': 0.77}, {'connected_gene': 'PDCL', 'score': 0.44}]
chr9	GH09I122800	122800067	122800126	0.5	[{'connected_gene': 'OR1K1', 'score': 550.77}, {'connected_gene': 'OR5C1', 'score': 0.39}, {'connected_gene': 'PDCL', 'score': 0.31}]
chr9	GH09I122835	122835181	122835860	0.58	[{'connected_gene': 'ZBTB6', 'score': 10.51}, {'connected_gene': 'SNORD90', 'score': 10.32}, {'connected_gene': 'OR1K1', 'score': 10.14}, {'connected_gene': 'KRT18P67', 'score': 0.77}, {'connected_gene': 'PDCL', 'score': 0.44}]
chr9	GH09I122811	122810001	122810401	0.74	[{'connected_gene': 'GC09M122816', 'score': 0.44}, {'connected_gene': 'OR1K1', 'score': 0.39}, {'connected_gene': 'PDCL', 'score': 0.37}]
chr9	GH09I122810	122810422	122810591	0.74	[{'connected_gene': 'GC09M122816', 'score': 0.44}, {'connected_gene': 'OR1K1', 'score': 0.39}, {'connected_gene': 'PDCL', 'score': 0.37}]
chr9	GH09I122815	122815470	122817232	0.99	[{'connected_gene': 'GC09M122816', 'score': 550.77}, {'connected_gene': 'OR5C1', 'score': 10.48}, {'connected_gene': 'SNORD90', 'score': 10.15}, {'connected_gene': 'PDCL', 'score': 0.39}, {'connected_gene': 'OR1K1', 'score': 0.37}]