PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000538666	[[68642021, 68642656], [68645292, 68645358], [68646283, 68646427], [68646543, 68646609], [68647042, 68647274], [68647362, 68647387]]	[[68642578, 68642656], [68645292, 68645358], [68646283, 68646427], [68646543, 68646609], [68647042, 68647228]]
ENST00000328087	[[68642024, 68642656], [68645292, 68645358], [68646283, 68646427], [68646543, 68646609], [68647042, 68647281]]	[[68642578, 68642656], [68645292, 68645358], [68646283, 68646427], [68646543, 68646609], [68647042, 68647228]]
NM_020525	[[68642024, 68642656], [68645292, 68645358], [68646283, 68646427], [68646543, 68646609], [68647042, 68647281]]	[[68642578, 68642656], [68645292, 68645358], [68646283, 68646427], [68646543, 68646609], [68647042, 68647228]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr12	GH12I068404	68404672	68407423	1.29	[{'connected_gene': 'NUP107', 'score': 20.88}, {'connected_gene': 'CPSF6', 'score': 14.37}, {'connected_gene': 'KRT8P39', 'score': 11.12}, {'connected_gene': 'MDM2', 'score': 4.06}, {'connected_gene': 'MDM1', 'score': 3.96}, {'connected_gene': 'IL22', 'score': 3.18}, {'connected_gene': 'SLC35E3', 'score': 1.9}, {'connected_gene': 'RAP1B', 'score': 1.8}, {'connected_gene': 'GC12P068422', 'score': 0.37}, {'connected_gene': 'LINC02384', 'score': 0.25}, {'connected_gene': 'ENSG00000256273', 'score': 0.21}]
chr12	GH12I068312	68312070	68312369	0.22	[{'connected_gene': 'MDM1', 'score': 16.85}, {'connected_gene': 'NUP107', 'score': 14.25}, {'connected_gene': 'MDM2', 'score': 13.95}, {'connected_gene': 'IL22', 'score': 12.6}, {'connected_gene': 'IL26', 'score': 11.71}, {'connected_gene': 'LINC02384', 'score': 10.89}, {'connected_gene': 'RPL7P42', 'score': 10.09}, {'connected_gene': 'LOC100507250', 'score': 10.09}, {'connected_gene': 'LOC100130075', 'score': 9.51}, {'connected_gene': 'SLC35E3', 'score': 3.32}, {'connected_gene': 'GC12M068294', 'score': 0.39}, {'connected_gene': 'LOC105369818', 'score': 0.14}]
chr12	GH12I068245	68245332	68246409	0.85	[{'connected_gene': 'MDM1', 'score': 14.99}, {'connected_gene': 'IL26', 'score': 12.04}, {'connected_gene': 'LINC02384', 'score': 10.45}, {'connected_gene': 'IL22', 'score': 0.44}, {'connected_gene': 'LOC105369818', 'score': 0.25}]
chr12	GH12I068258	68258671	68260465	0.58	[{'connected_gene': 'MDM1', 'score': 16.5}, {'connected_gene': 'IL26', 'score': 11.62}, {'connected_gene': 'LINC02384', 'score': 10.14}, {'connected_gene': 'IL22', 'score': 0.44}, {'connected_gene': 'LOC105369818', 'score': 0.21}, {'connected_gene': 'GC12M068294', 'score': 0.21}]
chr12	GH12I068223	68223001	68223750	1.29	[{'connected_gene': 'MDM1', 'score': 29.67}, {'connected_gene': 'IL22', 'score': 12.73}, {'connected_gene': 'LINC02384', 'score': 10.96}, {'connected_gene': 'NUP107', 'score': 8.66}, {'connected_gene': 'LINC02421', 'score': 6.91}, {'connected_gene': 'IL26', 'score': 0.77}, {'connected_gene': 'GC12P068213', 'score': 0.39}, {'connected_gene': 'LOC105369818', 'score': 0.34}, {'connected_gene': 'IFNG-AS1', 'score': 0.07}]
chr12	GH12I068356	68356404	68356641	0.79	[{'connected_gene': 'MDM1', 'score': 12.45}, {'connected_gene': 'LINC02384', 'score': 12.27}, {'connected_gene': 'NUP107', 'score': 10.69}, {'connected_gene': 'LOC100507250', 'score': 10.69}, {'connected_gene': 'RPL7P42', 'score': 10.69}, {'connected_gene': 'SNORA70G', 'score': 10.4}, {'connected_gene': 'RPL10P12', 'score': 10.4}, {'connected_gene': 'RAP1B', 'score': 5.15}, {'connected_gene': 'IL22', 'score': 1.6}, {'connected_gene': 'ENSG00000256273', 'score': 0.39}, {'connected_gene': 'GC12P068422', 'score': 0.2}]
chr12	GH12I068236	68236175	68238019	0.89	[{'connected_gene': 'MDM1', 'score': 16.96}, {'connected_gene': 'LINC02384', 'score': 10.52}, {'connected_gene': 'MDM2', 'score': 6.17}, {'connected_gene': 'IL26', 'score': 5.3}, {'connected_gene': 'IL22', 'score': 0.37}, {'connected_gene': 'LOC105369818', 'score': 0.28}]
chr12	GH12I068239	68239516	68241791	1.08	[{'connected_gene': 'MDM1', 'score': 10.6}, {'connected_gene': 'LINC02384', 'score': 10.52}, {'connected_gene': 'LINC02421', 'score': 8.8}, {'connected_gene': 'MDM2', 'score': 7.65}, {'connected_gene': 'IL26', 'score': 0.39}, {'connected_gene': 'IL22', 'score': 0.39}, {'connected_gene': 'LOC105369818', 'score': 0.26}]
chr12	GH12I068317	68317244	68318501	0.57	[{'connected_gene': 'IL26', 'score': 11.92}, {'connected_gene': 'NUP107', 'score': 10.14}, {'connected_gene': 'LOC100507250', 'score': 10.14}, {'connected_gene': 'RPL7P42', 'score': 10.14}, {'connected_gene': 'SNORA70G', 'score': 9.35}, {'connected_gene': 'RPL10P12', 'score': 9.35}, {'connected_gene': 'LINC02421', 'score': 4.42}, {'connected_gene': 'GC12M068294', 'score': 0.77}, {'connected_gene': 'MDM1', 'score': 0.39}, {'connected_gene': 'IL22', 'score': 0.21}]
chr12	GH12I068266	68266705	68268552	0.72	[{'connected_gene': 'IL26', 'score': 8.57}, {'connected_gene': 'MDM1', 'score': 7.45}, {'connected_gene': 'IL22', 'score': 2.4}, {'connected_gene': 'GC12M068294', 'score': 0.23}, {'connected_gene': 'LOC105369818', 'score': 0.2}]
chr12	GH12I068309	68309933	68311086	0.43	[{'connected_gene': 'IL26', 'score': 11.4}, {'connected_gene': 'MDM1', 'score': 11.03}, {'connected_gene': 'LINC02384', 'score': 10.8}, {'connected_gene': 'IL22', 'score': 10.8}, {'connected_gene': 'MDM2', 'score': 9.51}, {'connected_gene': 'LOC100130075', 'score': 9.51}, {'connected_gene': 'GC12M068294', 'score': 0.39}, {'connected_gene': 'LOC105369818', 'score': 0.14}]
chr12	GH12I068290	68290261	68290470	0.78	[{'connected_gene': 'IL26', 'score': 11.14}, {'connected_gene': 'MDM1', 'score': 10.62}, {'connected_gene': 'LINC02384', 'score': 10.46}, {'connected_gene': 'GC12M068294', 'score': 0.29}, {'connected_gene': 'IL22', 'score': 0.28}, {'connected_gene': 'LOC105369818', 'score': 0.16}]
chr12	GH12I068291	68291441	68291590	0.38	[{'connected_gene': 'IL26', 'score': 11.13}, {'connected_gene': 'MDM1', 'score': 10.62}, {'connected_gene': 'LINC02384', 'score': 10.46}, {'connected_gene': 'GC12M068294', 'score': 0.29}, {'connected_gene': 'IL22', 'score': 0.28}, {'connected_gene': 'LOC105369818', 'score': 0.16}]
chr12	GH12I068225	68225862	68225921	0.61	[{'connected_gene': 'IL26', 'score': 550.77}, {'connected_gene': 'LOC105369818', 'score': 0.31}, {'connected_gene': 'IL22', 'score': 0.31}, {'connected_gene': 'IFNG-AS1', 'score': 0.07}]
chr12	GH12I068311	68311291	68311579	0.33	[{'connected_gene': 'IL22', 'score': 13.45}, {'connected_gene': 'IL26', 'score': 11.39}, {'connected_gene': 'MDM1', 'score': 11.03}, {'connected_gene': 'LINC02384', 'score': 10.8}, {'connected_gene': 'MDM2', 'score': 9.51}, {'connected_gene': 'LOC100130075', 'score': 9.51}, {'connected_gene': 'GC12M068294', 'score': 0.39}, {'connected_gene': 'LOC105369818', 'score': 0.14}]
chr12	GH12I068277	68277901	68278050	0.72	[{'connected_gene': 'IL22', 'score': 11.73}, {'connected_gene': 'IL26', 'score': 10.9}, {'connected_gene': 'MDM1', 'score': 10.72}, {'connected_gene': 'LINC02384', 'score': 10.58}, {'connected_gene': 'GC12M068294', 'score': 0.26}, {'connected_gene': 'LOC105369818', 'score': 0.18}]
chr12	GH12I068532	68532037	68532416	0.51	[{'connected_gene': 'IL22', 'score': 3.35}, {'connected_gene': 'MDM2', 'score': 2.8}, {'connected_gene': 'MDM1', 'score': 2.72}, {'connected_gene': 'NUP107', 'score': 1.63}, {'connected_gene': 'GC12M068554', 'score': 0.34}, {'connected_gene': 'ENSG00000256917', 'score': 0.26}]
chr12	GH12I068264	68264639	68265763	0.43	[{'connected_gene': 'IL22', 'score': 0.39}, {'connected_gene': 'GC12M068294', 'score': 0.22}, {'connected_gene': 'LOC105369818', 'score': 0.2}]
chr12	GH12I068271	68271186	68271730	0.38	[{'connected_gene': 'IL22', 'score': 0.37}, {'connected_gene': 'GC12M068294', 'score': 0.23}, {'connected_gene': 'LOC105369818', 'score': 0.19}]
chr12	GH12I067826	67826081	67829235	1.33	[{'connected_gene': 'IL22', 'score': 1.71}, {'connected_gene': 'ENSG00000279505', 'score': 0.19}, {'connected_gene': 'LINC01479', 'score': 0.15}]
chr12	GH12I068396	68396626	68396917	0.24	[{'connected_gene': 'IL22', 'score': 3.96}, {'connected_gene': 'GC12P068422', 'score': 0.31}, {'connected_gene': 'LINC02384', 'score': 0.23}, {'connected_gene': 'ENSG00000256273', 'score': 0.23}]
chr12	GH12I067988	67988430	67993227	1.4	[{'connected_gene': 'IFNG-AS1', 'score': 567.46}, {'connected_gene': 'LINC01479', 'score': 10.47}, {'connected_gene': 'IFNG', 'score': 4.2}, {'connected_gene': 'IL22', 'score': 2.27}, {'connected_gene': 'DYRK2', 'score': 2.04}, {'connected_gene': 'GC12P067986', 'score': 0.77}, {'connected_gene': 'RPL39P28', 'score': 0.39}]
chr12	GH12I068319	68319875	68320745	0.8	[{'connected_gene': 'GC12M068294', 'score': 550.77}, {'connected_gene': 'IL26', 'score': 11.92}, {'connected_gene': 'RPL7P42', 'score': 10.14}, {'connected_gene': 'LOC100507250', 'score': 10.14}, {'connected_gene': 'NUP107', 'score': 10.14}, {'connected_gene': 'SNORA70G', 'score': 9.35}, {'connected_gene': 'RPL10P12', 'score': 9.35}, {'connected_gene': 'MDM1', 'score': 0.39}, {'connected_gene': 'IL22', 'score': 0.2}]
chr12	GH12I068421	68421769	68423030	0.42	[{'connected_gene': 'GC12P068422', 'score': 550.77}, {'connected_gene': 'LINC02384', 'score': 11.94}, {'connected_gene': 'MDM1', 'score': 11.78}, {'connected_gene': 'IL22', 'score': 1.59}, {'connected_gene': 'ENSG00000256273', 'score': 0.18}]