Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000374016 [[117904096, 117904147], [117995454, 117995615], [118054060, 118054215], [118068184, 118068275], [118138920, 118138994], [118162637, 118162711], [118163471, 118163589], [118164396, 118164923]] [[118138981, 118138994], [118162637, 118162711], [118163471, 118163589], [118164396, 118164404]]
ENST00000477580 [[118053075, 118053216], [118054060, 118054215], [118068184, 118068275], [118074490, 118076759]] None
ENST00000484171 [[118054126, 118054215], [118068184, 118068275], [118092581, 118093609]] None
NM_017418 [[117904096, 117904147], [117995454, 117995615], [118054060, 118054215], [118068184, 118068275], [118138920, 118138994], [118162637, 118162711], [118163471, 118163589], [118164396, 118164923]] [[118138981, 118138994], [118162637, 118162711], [118163471, 118163589], [118164396, 118164404]]
Promoter
Chrom Start End Description
chr9 118053068 118053087 CAGE_peak_1_at_DEC1_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr9 GH09I114803 114803061 114807606 1.75 [{'connected_gene': 'TNFSF15', 'score': 564.75}, {'connected_gene': 'DEC1', 'score': 22.87}, {'connected_gene': 'WHRN', 'score': 1.27}, {'connected_gene': 'ENSG00000274919', 'score': 0.29}]
chr9 GH09I115069 115069787 115070932 0.2 [{'connected_gene': 'TNC', 'score': 15.91}, {'connected_gene': 'DEC1', 'score': 10.71}, {'connected_gene': 'TNFSF15', 'score': 10.44}, {'connected_gene': 'GC09M115052', 'score': 0.37}]
chr9 GH09I115083 115083432 115083502 0.22 [{'connected_gene': 'TNC', 'score': 11.28}, {'connected_gene': 'DEC1', 'score': 10.58}, {'connected_gene': 'TNFSF15', 'score': 1.91}, {'connected_gene': 'GC09M115052', 'score': 0.29}]
chr9 GH09I115411 115411338 115412970 0.43 [{'connected_gene': 'TNC', 'score': 10.56}, {'connected_gene': 'DEC1', 'score': 4.93}, {'connected_gene': 'LOC105376233', 'score': 4.38}, {'connected_gene': 'LOC105376232', 'score': 0.26}, {'connected_gene': 'LOC105376235', 'score': 0.09}]
chr9 GH09I115372 115372292 115375122 1.04 [{'connected_gene': 'TNC', 'score': 6.56}, {'connected_gene': 'DEC1', 'score': 6.55}, {'connected_gene': 'LOC105376232', 'score': 0.44}, {'connected_gene': 'LOC105376235', 'score': 0.07}]
chr9 GH09I115179 115179801 115180000 0.2 [{'connected_gene': 'TNC', 'score': 10.9}, {'connected_gene': 'DEC1', 'score': 10.77}, {'connected_gene': 'LOC101928748', 'score': 0.26}, {'connected_gene': 'LOC105376233', 'score': 0.18}]
chr9 GH09I115156 115156553 115158375 0.94 [{'connected_gene': 'TNC', 'score': 10.83}, {'connected_gene': 'DEC1', 'score': 5.13}, {'connected_gene': 'LOC101928748', 'score': 0.37}, {'connected_gene': 'LOC105376233', 'score': 0.14}]
chr9 GH09I115180 115180029 115180324 0.26 [{'connected_gene': 'TNC', 'score': 10.9}, {'connected_gene': 'DEC1', 'score': 10.77}, {'connected_gene': 'LOC101928748', 'score': 0.26}, {'connected_gene': 'LOC105376233', 'score': 0.18}]
chr9 GH09I115114 115114447 115119631 2.05 [{'connected_gene': 'TNC', 'score': 564.0}, {'connected_gene': 'DEC1', 'score': 6.76}, {'connected_gene': 'LOC101928748', 'score': 0.34}]
chr9 GH09I115065 115065757 115069604 0.2 [{'connected_gene': 'TNC', 'score': 10.82}, {'connected_gene': 'DEC1', 'score': 10.71}, {'connected_gene': 'GC09M115052', 'score': 0.39}]
chr9 GH09I115104 115104339 115105554 0.58 [{'connected_gene': 'TNC', 'score': 14.64}, {'connected_gene': 'DEC1', 'score': 0.44}, {'connected_gene': 'GC09M115052', 'score': 0.23}]
chr9 GH09I115087 115087522 115087711 0.4 [{'connected_gene': 'TNC', 'score': 11.83}, {'connected_gene': 'DEC1', 'score': 0.31}, {'connected_gene': 'GC09M115052', 'score': 0.29}]
chr9 GH09I115105 115105956 115107451 0.92 [{'connected_gene': 'TNC', 'score': 15.01}, {'connected_gene': 'DEC1', 'score': 0.44}, {'connected_gene': 'GC09M115052', 'score': 0.23}]
chr9 GH09I115059 115058282 115058431 0.58 [{'connected_gene': 'TNC', 'score': 10.75}, {'connected_gene': 'DEC1', 'score': 10.56}, {'connected_gene': 'GC09M115052', 'score': 0.44}]
chr9 GH09I115098 115098020 115099348 0.58 [{'connected_gene': 'TNC', 'score': 14.63}, {'connected_gene': 'DEC1', 'score': 0.39}, {'connected_gene': 'GC09M115052', 'score': 0.25}]
chr9 GH09I115054 115054360 115056053 0.2 [{'connected_gene': 'TNC', 'score': 10.8}, {'connected_gene': 'DEC1', 'score': 10.55}, {'connected_gene': 'GC09M115052', 'score': 0.77}]
chr9 GH09I115058 115058474 115060623 0.66 [{'connected_gene': 'TNC', 'score': 10.81}, {'connected_gene': 'DEC1', 'score': 10.56}, {'connected_gene': 'GC09M115052', 'score': 0.44}]
chr9 GH09I115063 115063562 115063811 0.4 [{'connected_gene': 'TNC', 'score': 10.82}, {'connected_gene': 'GC09M115052', 'score': 0.39}, {'connected_gene': 'DEC1', 'score': 0.25}]
chr9 GH09I115077 115077620 115078784 0.2 [{'connected_gene': 'TNC', 'score': 19.58}, {'connected_gene': 'DEC1', 'score': 10.61}, {'connected_gene': 'GC09M115052', 'score': 0.31}]
chr9 GH09I115465 115465567 115468054 0.6 [{'connected_gene': 'TNC', 'score': 10.13}, {'connected_gene': 'LOC105376233', 'score': 8.12}, {'connected_gene': 'DEC1', 'score': 4.74}, {'connected_gene': 'LOC105376232', 'score': 0.15}, {'connected_gene': 'LOC105376235', 'score': 0.13}]
chr9 GH09I115289 115289807 115290226 0.52 [{'connected_gene': 'TNC', 'score': 5.56}, {'connected_gene': 'LOC105376233', 'score': 0.31}, {'connected_gene': 'LOC105376232', 'score': 0.18}, {'connected_gene': 'DEC1', 'score': 0.1}]
chr9 GH09I115400 115400382 115402004 0.2 [{'connected_gene': 'TNC', 'score': 7.79}, {'connected_gene': 'LOC105376232', 'score': 0.29}, {'connected_gene': 'LOC105376235', 'score': 0.08}, {'connected_gene': 'DEC1', 'score': 0.06}]
chr9 GH09I115341 115341562 115341671 0.2 [{'connected_gene': 'TNC', 'score': 9.71}, {'connected_gene': 'LOC105376232', 'score': 0.31}, {'connected_gene': 'LOC105376233', 'score': 0.18}, {'connected_gene': 'DEC1', 'score': 0.07}]
chr9 GH09I115202 115202397 115207871 1.67 [{'connected_gene': 'DEC1', 'score': 568.77}, {'connected_gene': 'TNC', 'score': 11.41}, {'connected_gene': 'TNFSF15', 'score': 4.83}, {'connected_gene': 'LOC105376233', 'score': 0.22}, {'connected_gene': 'LOC101928748', 'score': 0.2}]
chr9 GH09I115120 115120814 115121929 0.75 [{'connected_gene': 'DEC1', 'score': 11.2}, {'connected_gene': 'TNC', 'score': 5.44}, {'connected_gene': 'TNFSF15', 'score': 1.8}, {'connected_gene': 'LOC101928748', 'score': 0.37}]
chr9 GH09I115182 115182189 115184094 0.2 [{'connected_gene': 'DEC1', 'score': 26.84}, {'connected_gene': 'TNC', 'score': 10.25}, {'connected_gene': 'LOC101928748', 'score': 0.26}, {'connected_gene': 'LOC105376233', 'score': 0.18}]
chr9 GH09I115164 115164222 115165503 1.07 [{'connected_gene': 'DEC1', 'score': 19.14}, {'connected_gene': 'TNC', 'score': 10.66}, {'connected_gene': 'LOC101928748', 'score': 0.31}, {'connected_gene': 'LOC105376233', 'score': 0.15}]
chr9 GH09I115146 115146035 115147770 0.92 [{'connected_gene': 'DEC1', 'score': 9.16}, {'connected_gene': 'TNC', 'score': 4.47}, {'connected_gene': 'LOC101928748', 'score': 0.44}, {'connected_gene': 'LOC105376233', 'score': 0.13}]
chr9 GH09I115142 115141973 115144143 0.31 [{'connected_gene': 'DEC1', 'score': 5.66}, {'connected_gene': 'TNC', 'score': 4.62}, {'connected_gene': 'LOC101928748', 'score': 0.77}, {'connected_gene': 'LOC105376233', 'score': 0.13}]
chr9 GH09I115169 115169789 115171604 0.74 [{'connected_gene': 'DEC1', 'score': 26.78}, {'connected_gene': 'TNC', 'score': 15.49}, {'connected_gene': 'LOC101928748', 'score': 0.29}, {'connected_gene': 'LOC105376233', 'score': 0.16}]
chr9 GH09I115132 115132044 115136584 0.92 [{'connected_gene': 'DEC1', 'score': 6.14}, {'connected_gene': 'TNC', 'score': 4.52}, {'connected_gene': 'LOC101928748', 'score': 0.77}]
chr9 GH09I115126 115126544 115127911 0.58 [{'connected_gene': 'DEC1', 'score': 7.02}, {'connected_gene': 'TNC', 'score': 0.44}, {'connected_gene': 'LOC101928748', 'score': 0.39}]
chr9 GH09I115088 115087957 115089480 0.31 [{'connected_gene': 'DEC1', 'score': 14.91}, {'connected_gene': 'TNC', 'score': 11.85}, {'connected_gene': 'GC09M115052', 'score': 0.28}]
chr9 GH09I115109 115109102 115109921 0.63 [{'connected_gene': 'DEC1', 'score': 0.77}, {'connected_gene': 'TNC', 'score': 0.44}, {'connected_gene': 'GC09M115052', 'score': 0.22}]
chr9 GH09I115938 115938403 115947444 1.65 [{'connected_gene': 'DEC1', 'score': 4.83}, {'connected_gene': 'LINC00474', 'score': 0.37}, {'connected_gene': 'LOC105376236', 'score': 0.25}]
chr9 GH09I115588 115588175 115588246 0.48 [{'connected_gene': 'DEC1', 'score': 14.62}, {'connected_gene': 'LOC105376235', 'score': 0.44}, {'connected_gene': 'LOC105376232', 'score': 0.07}]
chr9 GH09I115659 115659101 115661026 0.2 [{'connected_gene': 'DEC1', 'score': 5.21}, {'connected_gene': 'PIR43594', 'score': 0.37}, {'connected_gene': 'LOC105376235', 'score': 0.21}]
chr9 GH09I115233 115233543 115234989 0.66 [{'connected_gene': 'DEC1', 'score': 8.11}, {'connected_gene': 'LOC105376233', 'score': 0.31}, {'connected_gene': 'LOC101928748', 'score': 0.15}]
chr9 GH09I115210 115210714 115211066 0.2 [{'connected_gene': 'DEC1', 'score': 8.64}, {'connected_gene': 'LOC105376233', 'score': 0.23}, {'connected_gene': 'LOC101928748', 'score': 0.19}]
chr9 GH09I115211 115211312 115212955 0.88 [{'connected_gene': 'DEC1', 'score': 8.12}, {'connected_gene': 'LOC105376233', 'score': 0.23}, {'connected_gene': 'LOC101928748', 'score': 0.19}]
chr9 GH09I115208 115208395 115210534 0.71 [{'connected_gene': 'DEC1', 'score': 11.24}, {'connected_gene': 'LOC105376233', 'score': 0.23}, {'connected_gene': 'LOC101928748', 'score': 0.19}]
chr9 GH09I115253 115253996 115255914 0.31 [{'connected_gene': 'DEC1', 'score': 9.94}, {'connected_gene': 'LOC105376233', 'score': 0.44}, {'connected_gene': 'LOC101928748', 'score': 0.13}]
chr9 GH09I115207 115207902 115208341 0.2 [{'connected_gene': 'DEC1', 'score': 9.99}, {'connected_gene': 'LOC105376233', 'score': 0.23}, {'connected_gene': 'LOC101928748', 'score': 0.2}]
chr9 GH09I115213 115213307 115214683 0.8 [{'connected_gene': 'DEC1', 'score': 8.7}, {'connected_gene': 'LOC105376233', 'score': 0.25}, {'connected_gene': 'LOC101928748', 'score': 0.18}]
chr9 GH09I115249 115249764 115251834 0.83 [{'connected_gene': 'DEC1', 'score': 9.95}, {'connected_gene': 'TEX53', 'score': 5.71}, {'connected_gene': 'TNC', 'score': 5.49}, {'connected_gene': 'LOC105376233', 'score': 0.39}, {'connected_gene': 'LOC101928748', 'score': 0.14}]
chr9 GH09I115166 115166948 115168033 0.58 [{'connected_gene': 'DEC1', 'score': 26.05}, {'connected_gene': 'LOC101928748', 'score': 0.31}, {'connected_gene': 'LOC105376233', 'score': 0.15}]
chr9 GH09I115141 115141767 115141826 0.5 [{'connected_gene': 'DEC1', 'score': 550.31}, {'connected_gene': 'LOC101928748', 'score': 0.77}, {'connected_gene': 'LOC105376233', 'score': 0.13}]
chr9 GH09I115193 115193123 115194031 0.49 [{'connected_gene': 'DEC1', 'score': 18.16}, {'connected_gene': 'LOC101928748', 'score': 0.22}, {'connected_gene': 'LOC105376233', 'score': 0.2}]
chr9 GH09I115192 115192282 115192431 0.52 [{'connected_gene': 'DEC1', 'score': 10.28}, {'connected_gene': 'LOC101928748', 'score': 0.23}, {'connected_gene': 'LOC105376233', 'score': 0.19}]
chr9 GH09I115154 115154404 115155656 0.2 [{'connected_gene': 'DEC1', 'score': 7.28}, {'connected_gene': 'LOC101928748', 'score': 0.37}, {'connected_gene': 'LOC105376233', 'score': 0.14}]
chr9 GH09I115610 115610259 115614188 0.2 [{'connected_gene': 'LOC105376233', 'score': 9.68}, {'connected_gene': 'TNC', 'score': 4.68}, {'connected_gene': 'DEC1', 'score': 4.51}, {'connected_gene': 'LOC105376235', 'score': 0.37}, {'connected_gene': 'PIR43594', 'score': 0.2}]
chr9 GH09I115261 115261156 115264483 1.31 [{'connected_gene': 'LOC105376233', 'score': 550.77}, {'connected_gene': 'TNC', 'score': 10.19}, {'connected_gene': 'DEC1', 'score': 5.56}, {'connected_gene': 'LOC105376232', 'score': 0.14}]
chr9 GH09I115291 115291800 115292191 0.4 [{'connected_gene': 'LOC105376233', 'score': 0.31}, {'connected_gene': 'LOC105376232', 'score': 0.18}, {'connected_gene': 'DEC1', 'score': 0.1}]
chr9 GH09I115266 115266150 115266587 0.46 [{'connected_gene': 'LOC105376233', 'score': 0.77}, {'connected_gene': 'LOC105376232', 'score': 0.15}, {'connected_gene': 'DEC1', 'score': 0.1}]
chr9 GH09I115292 115292559 115293365 0.2 [{'connected_gene': 'LOC105376233', 'score': 0.29}, {'connected_gene': 'LOC105376232', 'score': 0.19}, {'connected_gene': 'DEC1', 'score': 0.09}]
chr9 GH09I115293 115292200 115292401 0.2 [{'connected_gene': 'LOC105376233', 'score': 0.31}, {'connected_gene': 'LOC105376232', 'score': 0.18}, {'connected_gene': 'DEC1', 'score': 0.1}]
chr9 GH09I115295 115295319 115296428 0.2 [{'connected_gene': 'LOC105376233', 'score': 0.29}, {'connected_gene': 'LOC105376232', 'score': 0.19}, {'connected_gene': 'DEC1', 'score': 0.09}]
chr9 GH09I115395 115395762 115395992 0.31 [{'connected_gene': 'LOC105376233', 'score': 5.74}, {'connected_gene': 'LOC105376232', 'score': 0.31}, {'connected_gene': 'LOC105376235', 'score': 0.08}, {'connected_gene': 'DEC1', 'score': 0.06}]
chr9 GH09I115228 115228962 115230189 0.2 [{'connected_gene': 'LOC105376233', 'score': 0.29}, {'connected_gene': 'LOC101928748', 'score': 0.16}, {'connected_gene': 'DEC1', 'score': 0.13}]
chr9 GH09I115368 115368753 115370351 0.64 [{'connected_gene': 'LOC105376232', 'score': 550.77}, {'connected_gene': 'TNC', 'score': 5.3}, {'connected_gene': 'LOC105376235', 'score': 0.07}, {'connected_gene': 'DEC1', 'score': 0.07}]
chr9 GH09I115366 115366426 115368462 0.31 [{'connected_gene': 'LOC105376232', 'score': 550.77}, {'connected_gene': 'DEC1', 'score': 6.55}, {'connected_gene': 'TNC', 'score': 5.3}, {'connected_gene': 'LOC105376233', 'score': 0.15}]
chr9 GH09I115328 115328342 115328511 0.2 [{'connected_gene': 'LOC105376232', 'score': 0.28}, {'connected_gene': 'LOC105376233', 'score': 0.2}, {'connected_gene': 'DEC1', 'score': 0.08}]
chr9 GH09I115137 115137341 115138242 0.31 [{'connected_gene': 'LOC101928748', 'score': 550.77}, {'connected_gene': 'TNC', 'score': 4.52}, {'connected_gene': 'DEC1', 'score': 0.31}]
chr9 GH09I115152 115152642 115152671 0.2 [{'connected_gene': 'LOC101928748', 'score': 0.39}, {'connected_gene': 'DEC1', 'score': 0.26}, {'connected_gene': 'LOC105376233', 'score': 0.14}]

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