PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr1	11907265	11907271	CAGE_peak_9_at_NPPA_5end
chr1	11907318	11907327	CAGE_peak_7_at_NPPA_5end
chr1	11907395	11907410	CAGE_peak_4_at_NPPA_5end
chr1	11907415	11907418	CAGE_peak_15_at_NPPA_5end
chr1	11907441	11907453	CAGE_peak_3_at_NPPA_5end
chr1	11907474	11907481	CAGE_peak_10_at_NPPA_5end
chr1	11907829	11907847	CAGE_peak_1_at_NPPA_5end
chr1	11907940	11907947	CAGE_peak_2_at_NPPA_5end
chr1	11908185	11908202	CAGE_peak_6_at_NPPA_5end
chr1	11908227	11908236	CAGE_peak_8_at_NPPA_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I011989	11989433	11991585	1.2	[{'connected_gene': 'MFN2', 'score': 72.86}, {'connected_gene': 'MIIP', 'score': 13.14}, {'connected_gene': 'PLOD1', 'score': 11.4}, {'connected_gene': 'KIAA2013', 'score': 11.29}, {'connected_gene': 'RNU5E-4P', 'score': 11.23}, {'connected_gene': 'RNU5E-1', 'score': 11.23}, {'connected_gene': 'NPPB', 'score': 3.73}, {'connected_gene': 'NPPA', 'score': 1.86}, {'connected_gene': 'ENSG00000270914', 'score': 0.31}]
chr1	GH01I011856	11856431	11857480	0.38	[{'connected_gene': 'NPPB', 'score': 550.77}, {'connected_gene': 'NPPA-AS1', 'score': 22.09}, {'connected_gene': 'RNU5E-4P', 'score': 11.38}, {'connected_gene': 'RNU5E-1', 'score': 11.38}, {'connected_gene': 'LOC102724659', 'score': 10.76}, {'connected_gene': 'C1orf167', 'score': 10.73}, {'connected_gene': 'KIAA2013', 'score': 10.62}, {'connected_gene': 'MFN2', 'score': 10.38}, {'connected_gene': 'NPPA', 'score': 0.44}]
chr1	GH01I011846	11846819	11848609	1.13	[{'connected_gene': 'NPPA', 'score': 550.77}, {'connected_gene': 'ENSG00000275915', 'score': 550.77}, {'connected_gene': 'NPPA-AS1', 'score': 23.44}, {'connected_gene': 'CLCN6', 'score': 7.55}, {'connected_gene': 'MIIP', 'score': 4.56}]