PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000242152	[[24323781, 24323894], [24324859, 24325047], [24329117, 24329198], [24331281, 24331484]]	[[24324859, 24325047], [24329117, 24329198], [24331281, 24331306]]
ENST00000407573	[[24323806, 24323894], [24324493, 24324695], [24324859, 24325047], [24329117, 24329198], [24331281, 24331427]]	[[24324859, 24325047], [24329117, 24329198], [24331281, 24331306]]
ENST00000405982	[[24324725, 24325047], [24329117, 24329198], [24331281, 24331443]]	[[24324859, 24325047], [24329117, 24329198], [24331281, 24331306]]
NM_000905	[[24323806, 24323894], [24324859, 24325047], [24329117, 24329198], [24331281, 24331484]]	[[24324859, 24325047], [24329117, 24329198], [24331281, 24331306]]

Promoter

Chrom	Start	End	Description
chr7	24323800	24323815	CAGE_peak_1_at_NPY_5end
chr7	24324837	24324863	CAGE_peak_2_at_NPY_5end
chr7	24324936	24324947	CAGE_peak_3_at_NPY_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr7	GH07I023966	23966937	23967283	0.22	[{'connected_gene': 'STK31', 'score': 4.46}, {'connected_gene': 'NPY', 'score': 3.95}, {'connected_gene': 'PIR61988', 'score': 0.31}, {'connected_gene': 'LOC105375188', 'score': 0.23}]
chr7	GH07I024437	24435362	24435511	0.38	[{'connected_gene': 'MPP6', 'score': 11.04}, {'connected_gene': 'GC07P024499', 'score': 0.21}, {'connected_gene': 'NPY', 'score': 0.1}]
chr7	GH07I024406	24406902	24407131	0.43	[{'connected_gene': 'MPP6', 'score': 11.33}, {'connected_gene': 'GC07P024499', 'score': 0.16}, {'connected_gene': 'NPY', 'score': 0.13}]
chr7	GH07I024392	24392402	24393368	0.51	[{'connected_gene': 'MPP6', 'score': 10.43}, {'connected_gene': 'GC07P024499', 'score': 0.14}, {'connected_gene': 'NPY', 'score': 0.14}]
chr7	GH07I024403	24403609	24404406	0.31	[{'connected_gene': 'MPP6', 'score': 11.33}, {'connected_gene': 'GC07P024499', 'score': 0.15}, {'connected_gene': 'NPY', 'score': 0.13}]
chr7	GH07I024435	24435102	24435271	0.49	[{'connected_gene': 'MPP6', 'score': 11.04}, {'connected_gene': 'GC07P024499', 'score': 0.21}, {'connected_gene': 'NPY', 'score': 0.1}]
chr7	GH07I024395	24395444	24396108	0.58	[{'connected_gene': 'MPP6', 'score': 10.44}, {'connected_gene': 'GC07P024499', 'score': 0.15}, {'connected_gene': 'NPY', 'score': 0.14}]
chr7	GH07I024408	24408153	24408319	0.31	[{'connected_gene': 'MPP6', 'score': 11.33}, {'connected_gene': 'GC07P024499', 'score': 0.16}, {'connected_gene': 'NPY', 'score': 0.13}]
chr7	GH07I024436	24436339	24437019	0.38	[{'connected_gene': 'MPP6', 'score': 11.04}, {'connected_gene': 'GC07P024499', 'score': 0.21}, {'connected_gene': 'NPY', 'score': 0.1}]
chr7	GH07I024441	24441148	24442678	0.49	[{'connected_gene': 'MPP6', 'score': 5.24}, {'connected_gene': 'GC07P024499', 'score': 0.22}, {'connected_gene': 'NPY', 'score': 0.1}]
chr7	GH07I024405	24405624	24406520	0.58	[{'connected_gene': 'MPP6', 'score': 11.33}, {'connected_gene': 'GC07P024499', 'score': 0.16}, {'connected_gene': 'NPY', 'score': 0.13}]
chr7	GH07I024475	24475702	24475851	0.38	[{'connected_gene': 'MPP6', 'score': 20.95}, {'connected_gene': 'RNU6-1103P', 'score': 11.46}, {'connected_gene': 'GC07P024499', 'score': 0.34}, {'connected_gene': 'NPY', 'score': 0.08}]
chr7	GH07I024476	24476887	24478830	1.08	[{'connected_gene': 'MPP6', 'score': 20.96}, {'connected_gene': 'RNU6-1103P', 'score': 11.47}, {'connected_gene': 'GC07P024499', 'score': 0.34}, {'connected_gene': 'NPY', 'score': 0.08}]
chr7	GH07I023814	23814150	23814166	0.22	[{'connected_gene': 'NPY', 'score': 12.29}, {'connected_gene': 'TPT1P7', 'score': 0.77}, {'connected_gene': 'GC07M023895', 'score': 0.18}, {'connected_gene': 'STK31', 'score': 0.15}]
chr7	GH07I024111	24111954	24112060	0.22	[{'connected_gene': 'NPY', 'score': 3.86}, {'connected_gene': 'RNA5SP228', 'score': 0.34}, {'connected_gene': 'LOC105375188', 'score': 0.16}]
chr7	GH07I024171	24171716	24172546	0.2	[{'connected_gene': 'NPY', 'score': 10.75}, {'connected_gene': 'RNA5SP228', 'score': 0.28}, {'connected_gene': 'ENSG00000228944', 'score': 0.18}]
chr7	GH07I024326	24325607	24326477	0.57	[{'connected_gene': 'NPY', 'score': 0.26}, {'connected_gene': 'GC07P024499', 'score': 0.09}]
chr7	GH07I024367	24367982	24368107	0.2	[{'connected_gene': 'NPY', 'score': 0.18}, {'connected_gene': 'GC07P024499', 'score': 0.12}]
chr7	GH07I024325	24325202	24325351	0.31	[{'connected_gene': 'NPY', 'score': 0.26}, {'connected_gene': 'GC07P024499', 'score': 0.09}]
chr7	GH07I024336	24336882	24337689	0.49	[{'connected_gene': 'NPY', 'score': 0.23}, {'connected_gene': 'GC07P024499', 'score': 0.1}]
chr7	GH07I024409	24409027	24409949	0.38	[{'connected_gene': 'NPY', 'score': 4.67}, {'connected_gene': 'GC07P024499', 'score': 0.17}]
chr7	GH07I024379	24379362	24379511	0.59	[{'connected_gene': 'NPY', 'score': 0.15}, {'connected_gene': 'GC07P024499', 'score': 0.13}]
chr7	GH07I024372	24372715	24373972	0.2	[{'connected_gene': 'NPY', 'score': 5.29}, {'connected_gene': 'GC07P024499', 'score': 0.13}]
chr7	GH07I024290	24290200	24290601	0.96	[{'connected_gene': 'NPY', 'score': 4.85}, {'connected_gene': 'GC07P024499', 'score': 0.08}]
chr7	GH07I024318	24318442	24318591	0.49	[{'connected_gene': 'NPY', 'score': 0.29}, {'connected_gene': 'GC07P024499', 'score': 0.09}]
chr7	GH07I024341	24341813	24342180	0.34	[{'connected_gene': 'NPY', 'score': 7.26}, {'connected_gene': 'GC07P024499', 'score': 0.1}]
chr7	GH07I024366	24366055	24367699	0.31	[{'connected_gene': 'NPY', 'score': 0.18}, {'connected_gene': 'GC07P024499', 'score': 0.12}]
chr7	GH07I024284	24284141	24284200	0.61	[{'connected_gene': 'NPY', 'score': 550.77}, {'connected_gene': 'GC07P024499', 'score': 0.08}]
chr7	GH07I023879	23879060	23879301	0.22	[{'connected_gene': 'FAM221A', 'score': 14.79}, {'connected_gene': 'STK31', 'score': 5.05}, {'connected_gene': 'NPY', 'score': 3.64}, {'connected_gene': 'GC07M023895', 'score': 0.37}, {'connected_gene': 'TPT1P7', 'score': 0.2}]
chr7	GH07I023529	23529760	23532975	2.07	[{'connected_gene': 'TRA2A', 'score': 568.59}, {'connected_gene': 'GC07P023532', 'score': 550.77}, {'connected_gene': 'PIR50375', 'score': 550.77}, {'connected_gene': 'NPY', 'score': 4.9}, {'connected_gene': 'GC07M023491', 'score': 0.28}, {'connected_gene': 'ENSG00000200847', 'score': 0.28}]
chr7	GH07I024456	24456174	24457693	0.98	[{'connected_gene': 'RNU6-1103P', 'score': 10.99}, {'connected_gene': 'MPP6', 'score': 4.72}, {'connected_gene': 'GC07P024499', 'score': 0.26}, {'connected_gene': 'NPY', 'score': 0.09}]
chr7	GH07I024052	24052393	24053631	1.01	[{'connected_gene': 'ENSG00000227930', 'score': 5.88}, {'connected_gene': 'NPY', 'score': 1.88}, {'connected_gene': 'LOC105375188', 'score': 0.28}, {'connected_gene': 'RNA5SP228', 'score': 0.18}]
chr7	GH07I024401	24401322	24402933	0.97	[{'connected_gene': 'GC07P024499', 'score': 0.15}, {'connected_gene': 'NPY', 'score': 0.13}]
chr7	GH07I024426	24426622	24427302	0.2	[{'connected_gene': 'GC07P024499', 'score': 0.19}, {'connected_gene': 'NPY', 'score': 0.11}]
chr7	GH07I024396	24396482	24396611	0.31	[{'connected_gene': 'GC07P024499', 'score': 0.15}, {'connected_gene': 'NPY', 'score': 0.14}]
chr7	GH07I024390	24390182	24390983	0.69	[{'connected_gene': 'GC07P024499', 'score': 0.14}, {'connected_gene': 'NPY', 'score': 0.14}]