PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000537618	[[124894744, 124895253], [124910390, 124910556], [124914523, 124914687], [124921905, 124922066]]	[[124895247, 124895253], [124910390, 124910556], [124914523, 124914687], [124921905, 124921956]]
ENST00000373768	[[124906336, 124906657], [124910390, 124910556], [124914523, 124914687], [124921905, 124922098]]	[[124906519, 124906657], [124910390, 124910556], [124914523, 124914687], [124921905, 124921956]]
NM_001318195	[[124894744, 124895253], [124910390, 124910556], [124914523, 124914687], [124921905, 124922098]]	[[124895247, 124895253], [124910390, 124910556], [124914523, 124914687], [124921905, 124921956]]
NM_014222	[[124906336, 124906657], [124910390, 124910556], [124914523, 124914687], [124921905, 124922098]]	[[124906519, 124906657], [124910390, 124910556], [124914523, 124914687], [124921905, 124921956]]

Promoter

Chrom	Start	End	Description
chr9	124922006	124922019	CAGE_peak_2_at_NDUFA8_5end
chr9	124922021	124922074	CAGE_peak_1_at_NDUFA8_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I122140	122140522	122140671	0.69	[{'connected_gene': 'MRRF', 'score': 10.94}, {'connected_gene': 'RBM18', 'score': 10.94}, {'connected_gene': 'TTLL11', 'score': 10.91}, {'connected_gene': 'OR1K1', 'score': 9.76}, {'connected_gene': 'NDUFA8', 'score': 0.37}, {'connected_gene': 'MIR4478', 'score': 0.34}]
chr9	GH09I122134	122134862	122135011	0.57	[{'connected_gene': 'PTGS1', 'score': 10.79}, {'connected_gene': 'TTLL11', 'score': 10.66}, {'connected_gene': 'MIR4478', 'score': 0.39}, {'connected_gene': 'NDUFA8', 'score': 0.34}]
chr9	GH09I122135	122135022	122135171	0.57	[{'connected_gene': 'PTGS1', 'score': 10.79}, {'connected_gene': 'TTLL11', 'score': 10.66}, {'connected_gene': 'MIR4478', 'score': 0.39}, {'connected_gene': 'NDUFA8', 'score': 0.34}]
chr9	GH09I122133	122133762	122133911	0.31	[{'connected_gene': 'PTGS1', 'score': 10.79}, {'connected_gene': 'TTLL11', 'score': 10.66}, {'connected_gene': 'MIR4478', 'score': 0.39}, {'connected_gene': 'NDUFA8', 'score': 0.31}]
chr9	GH09I122158	122158322	122158531	0.63	[{'connected_gene': 'MORN5', 'score': 550.77}, {'connected_gene': 'NDUFA8', 'score': 550.77}, {'connected_gene': 'MIR4478', 'score': 0.28}]
chr9	GH09I122159	122158600	122160431	1.95	[{'connected_gene': 'MORN5', 'score': 550.77}, {'connected_gene': 'NDUFA8', 'score': 550.77}, {'connected_gene': 'MIR4478', 'score': 0.28}]
chr9	GH09I122125	122125082	122127847	1.06	[{'connected_gene': 'TTLL11', 'score': 11.39}, {'connected_gene': 'MRRF', 'score': 10.6}, {'connected_gene': 'RBM18', 'score': 10.6}, {'connected_gene': 'PTGS1', 'score': 10.07}, {'connected_gene': 'OR1K1', 'score': 10.0}, {'connected_gene': 'MIR4478', 'score': 0.44}, {'connected_gene': 'NDUFA8', 'score': 0.29}]
chr9	GH09I122131	122131702	122131851	0.46	[{'connected_gene': 'TTLL11', 'score': 11.31}, {'connected_gene': 'LHX6', 'score': 10.35}, {'connected_gene': 'OR1K1', 'score': 9.52}, {'connected_gene': 'MIR4478', 'score': 0.39}, {'connected_gene': 'NDUFA8', 'score': 0.31}]
chr9	GH09I122123	122123082	122123251	0.8	[{'connected_gene': 'MIR4478', 'score': 0.77}, {'connected_gene': 'NDUFA8', 'score': 0.28}]