PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000255381	[[10346606, 10346844], [10347920, 10348016], [10348111, 10348216], [10348292, 10348463], [10348553, 10348679], [10350329, 10350533], [10351134, 10351443], [10351712, 10351837], [10351934, 10352100], [10352180, 10352364], [10353769, 10353966], [10354093, 10354212], [10354642, 10354769], [10355257, 10355647], [10355732, 10355823], [10356103, 10356249], [10356468, 10356645], [10356959, 10357202], [10357871, 10358127], [10358257, 10358394], [10358488, 10358612], [10358930, 10359048], [10359130, 10359218], [10359801, 10359872], [10360736, 10361046], [10362567, 10362738], [10363268, 10363418], [10363519, 10363638], [10364232, 10364371], [10366181, 10366285], [10366406, 10366505], [10366654, 10366718], [10366867, 10366960], [10367788, 10367903], [10367997, 10368025], [10368758, 10368915], [10369589, 10369733], [10369858, 10370101], [10372604, 10372653], [10372853, 10372876]]	[[10346691, 10346844], [10347920, 10348016], [10348111, 10348216], [10348292, 10348463], [10348553, 10348679], [10350329, 10350533], [10351134, 10351443], [10351712, 10351837], [10351934, 10352100], [10352180, 10352364], [10353769, 10353966], [10354093, 10354212], [10354642, 10354769], [10355257, 10355647], [10355732, 10355823], [10356103, 10356249], [10356468, 10356645], [10356959, 10357202], [10357871, 10358127], [10358257, 10358394], [10358488, 10358612], [10358930, 10359048], [10359130, 10359218], [10359801, 10359872], [10360736, 10361046], [10362567, 10362738], [10363268, 10363418], [10363519, 10363638], [10364232, 10364371], [10366181, 10366285], [10366406, 10366505], [10366654, 10366718], [10366867, 10366960], [10367788, 10367903], [10367997, 10368025], [10368758, 10368915], [10369589, 10369733], [10369858, 10370062]]
NM_017533	[[10346606, 10346844], [10347920, 10348016], [10348111, 10348216], [10348292, 10348463], [10348553, 10348679], [10350329, 10350533], [10351134, 10351443], [10351712, 10351837], [10351934, 10352100], [10352180, 10352364], [10353769, 10353966], [10354093, 10354212], [10354642, 10354769], [10355257, 10355647], [10355732, 10355823], [10356103, 10356249], [10356468, 10356645], [10356959, 10357202], [10357871, 10358127], [10358257, 10358394], [10358488, 10358612], [10358930, 10359048], [10359130, 10359218], [10359801, 10359872], [10360736, 10361046], [10362567, 10362738], [10363268, 10363418], [10363519, 10363638], [10364232, 10364371], [10366181, 10366285], [10366406, 10366505], [10366654, 10366718], [10366867, 10366960], [10367788, 10367903], [10367997, 10368025], [10368758, 10368915], [10369589, 10369733], [10369858, 10370101], [10372604, 10372653], [10372853, 10372876]]	[[10346691, 10346844], [10347920, 10348016], [10348111, 10348216], [10348292, 10348463], [10348553, 10348679], [10350329, 10350533], [10351134, 10351443], [10351712, 10351837], [10351934, 10352100], [10352180, 10352364], [10353769, 10353966], [10354093, 10354212], [10354642, 10354769], [10355257, 10355647], [10355732, 10355823], [10356103, 10356249], [10356468, 10356645], [10356959, 10357202], [10357871, 10358127], [10358257, 10358394], [10358488, 10358612], [10358930, 10359048], [10359130, 10359218], [10359801, 10359872], [10360736, 10361046], [10362567, 10362738], [10363268, 10363418], [10363519, 10363638], [10364232, 10364371], [10366181, 10366285], [10366406, 10366505], [10366654, 10366718], [10366867, 10366960], [10367788, 10367903], [10367997, 10368025], [10368758, 10368915], [10369589, 10369733], [10369858, 10370062]]

Promoter

Chrom	Start	End	Description
chr17	10372875	10372876	CAGE_peak_1_at_MYH4_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr17	GH17I010317	10317323	10317594	0.69	[{'connected_gene': 'MYH13', 'score': 7.68}, {'connected_gene': 'MYH4', 'score': 2.06}, {'connected_gene': 'GAS7', 'score': 1.33}, {'connected_gene': 'ENSG00000264067', 'score': 0.77}, {'connected_gene': 'PIR47100', 'score': 0.44}, {'connected_gene': 'ENSG00000273388', 'score': 0.31}, {'connected_gene': 'GC17P010287', 'score': 0.29}]
chr17	GH17I010417	10417336	10418599	0.2	[{'connected_gene': 'MYH13', 'score': 11.36}, {'connected_gene': 'MYH4', 'score': 11.08}, {'connected_gene': 'MYH8', 'score': 0.77}, {'connected_gene': 'GC17P010421', 'score': 0.77}, {'connected_gene': 'MYHAS', 'score': 0.29}, {'connected_gene': 'ENSG00000272736', 'score': 0.29}]
chr17	GH17I010125	10125282	10129474	1.26	[{'connected_gene': 'GAS7', 'score': 26.69}, {'connected_gene': 'MYH4', 'score': 6.97}, {'connected_gene': 'GC17M010130', 'score': 0.77}, {'connected_gene': 'GC17M010115', 'score': 0.44}]
chr17	GH17I010170	10170738	10173052	1.19	[{'connected_gene': 'GAS7', 'score': 23.9}, {'connected_gene': 'MYH4', 'score': 1.38}, {'connected_gene': 'GC17M010159', 'score': 0.44}]
chr17	GH17I010196	10196060	10196415	0.22	[{'connected_gene': 'GAS7', 'score': 10.74}, {'connected_gene': 'MYH4', 'score': 2.25}, {'connected_gene': 'GC17M010159', 'score': 0.29}]
chr17	GH17I010420	10420041	10422133	0.7	[{'connected_gene': 'MYH8', 'score': 550.77}, {'connected_gene': 'GC17P010421', 'score': 550.77}, {'connected_gene': 'MYH13', 'score': 11.34}, {'connected_gene': 'MYH4', 'score': 11.09}, {'connected_gene': 'MYHAS', 'score': 0.28}, {'connected_gene': 'ENSG00000272736', 'score': 0.28}]
chr17	GH17I010379	10379864	10381716	0.31	[{'connected_gene': 'MYH8', 'score': 11.59}, {'connected_gene': 'MYH4', 'score': 10.88}, {'connected_gene': 'MYHAS', 'score': 0.77}, {'connected_gene': 'ENSG00000272736', 'score': 0.77}, {'connected_gene': 'MYH13', 'score': 0.44}]
chr17	GH17I010333	10333971	10334234	0.22	[{'connected_gene': 'MYH4', 'score': 15.31}, {'connected_gene': 'ENSG00000264067', 'score': 0.39}, {'connected_gene': 'GC17P010345', 'score': 0.39}, {'connected_gene': 'MYH13', 'score': 0.28}, {'connected_gene': 'GC17P010287', 'score': 0.25}]
chr17	GH17I010091	10091965	10091973	0.24	[{'connected_gene': 'MYH4', 'score': 5.41}, {'connected_gene': 'GC17P010097', 'score': 0.44}, {'connected_gene': 'GC17M010087', 'score': 0.44}, {'connected_gene': 'PIR48956', 'score': 0.44}, {'connected_gene': 'GAS7', 'score': 0.14}]
chr17	GH17I010446	10446874	10448513	0.79	[{'connected_gene': 'MYH4', 'score': 11.88}, {'connected_gene': 'MYH8', 'score': 11.41}, {'connected_gene': 'GC17P010459', 'score': 0.39}, {'connected_gene': 'MYHAS', 'score': 0.21}, {'connected_gene': 'ENSG00000272736', 'score': 0.21}]
chr17	GH17I010556	10556026	10558072	0.31	[{'connected_gene': 'MYH4', 'score': 10.96}, {'connected_gene': 'MYH2', 'score': 0.44}, {'connected_gene': 'GC17P010567', 'score': 0.39}, {'connected_gene': 'MYHAS', 'score': 0.09}]
chr17	GH17I010512	10512992	10514174	0.2	[{'connected_gene': 'MYH4', 'score': 11.53}, {'connected_gene': 'MYH1', 'score': 0.77}, {'connected_gene': 'GC17P010483', 'score': 0.31}, {'connected_gene': 'MYHAS', 'score': 0.12}, {'connected_gene': 'ENSG00000272736', 'score': 0.12}]
chr17	GH17I010469	10469549	10469608	0.5	[{'connected_gene': 'MYH4', 'score': 550.77}, {'connected_gene': 'GC17P010483', 'score': 0.39}, {'connected_gene': 'MYHAS', 'score': 0.17}, {'connected_gene': 'ENSG00000272736', 'score': 0.17}]
chr17	GH17I010678	10678487	10678882	0.59	[{'connected_gene': 'MYH3', 'score': 550.77}, {'connected_gene': 'GC17M010678', 'score': 550.77}, {'connected_gene': 'ADPRM', 'score': 47.45}, {'connected_gene': 'ENSG00000261433', 'score': 11.53}, {'connected_gene': 'MAGOH2P', 'score': 11.17}, {'connected_gene': 'MYH4', 'score': 2.32}, {'connected_gene': 'SCO1', 'score': 0.37}]
chr17	GH17I010518	10518275	10518334	0.5	[{'connected_gene': 'MYH1', 'score': 550.77}, {'connected_gene': 'MYH4', 'score': 11.52}, {'connected_gene': 'GC17P010483', 'score': 0.29}, {'connected_gene': 'MYHAS', 'score': 0.12}, {'connected_gene': 'ENSG00000272736', 'score': 0.12}]
chr17	GH17I010382	10382525	10386442	0.49	[{'connected_gene': 'MYHAS', 'score': 550.77}, {'connected_gene': 'ENSG00000272736', 'score': 550.77}, {'connected_gene': 'MYH8', 'score': 11.6}, {'connected_gene': 'MYH4', 'score': 10.88}, {'connected_gene': 'GC17P010421', 'score': 0.28}]
chr17	GH17I010112	10112881	10122738	1.56	[{'connected_gene': 'ENSG00000261433', 'score': 13.93}, {'connected_gene': 'ADPRM', 'score': 13.06}, {'connected_gene': 'MAGOH2P', 'score': 10.69}, {'connected_gene': 'GAS7', 'score': 8.28}, {'connected_gene': 'MYH4', 'score': 6.31}, {'connected_gene': 'GC17M010115', 'score': 0.77}, {'connected_gene': 'GC17P010097', 'score': 0.37}]
chr17	GH17I010578	10578502	10580648	0.43	[{'connected_gene': 'ENSG00000214970', 'score': 550.77}, {'connected_gene': 'MYH4', 'score': 10.28}, {'connected_gene': 'GC17M010631', 'score': 0.22}, {'connected_gene': 'MYHAS', 'score': 0.08}]
chr17	GH17I010768	10768943	10769218	0.28	[{'connected_gene': 'GC17M010769', 'score': 550.77}, {'connected_gene': 'ENSG00000264016', 'score': 550.77}, {'connected_gene': 'RNU6-1065P', 'score': 11.39}, {'connected_gene': 'RPL15P21', 'score': 11.38}, {'connected_gene': 'MYH3', 'score': 10.59}, {'connected_gene': 'ADPRM', 'score': 10.46}, {'connected_gene': 'SCO1', 'score': 10.46}, {'connected_gene': 'PIRT', 'score': 4.16}, {'connected_gene': 'SHISA6', 'score': 3.43}, {'connected_gene': 'MYH4', 'score': 1.24}, {'connected_gene': 'TMEM220-AS1', 'score': 0.28}]