PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000396863	[[42295753, 42295943], [42302445, 42302539], [42311433, 42311526], [42315491, 42315712], [42320796, 42320959], [42328396, 42328684], [42331129, 42331543], [42333858, 42333998], [42338602, 42338702], [42340127, 42340241], [42341641, 42341746], [42343773, 42343923], [42344598, 42344958]]	[[42295923, 42295943], [42302445, 42302539], [42311433, 42311526], [42315491, 42315712], [42320796, 42320959], [42328396, 42328684], [42331129, 42331543], [42333858, 42333998], [42338602, 42338702], [42340127, 42340241], [42341641, 42341746], [42343773, 42343923], [42344598, 42344727]]
ENST00000217026	[[42295796, 42295943], [42302445, 42302539], [42310423, 42310495], [42311433, 42311526], [42315491, 42315712], [42320796, 42320959], [42328396, 42328684], [42331129, 42331543], [42333858, 42333998], [42338602, 42338702], [42340127, 42340241], [42341641, 42341746], [42343773, 42343923], [42344598, 42345136]]	[[42295923, 42295943], [42302445, 42302539], [42310423, 42310495], [42311433, 42311526], [42315491, 42315712], [42320796, 42320959], [42328396, 42328684], [42331129, 42331543], [42333858, 42333998], [42338602, 42338702], [42340127, 42340241], [42341641, 42341746], [42343773, 42343923], [42344598, 42344727]]
NM_001278610	[[42295658, 42295943], [42302445, 42302539], [42311433, 42311526], [42315491, 42315712], [42320796, 42320959], [42328396, 42328684], [42331129, 42331543], [42333858, 42333998], [42338602, 42338702], [42340127, 42340241], [42341641, 42341746], [42343773, 42343923], [42344598, 42345136]]	[[42295923, 42295943], [42302445, 42302539], [42311433, 42311526], [42315491, 42315712], [42320796, 42320959], [42328396, 42328684], [42331129, 42331543], [42333858, 42333998], [42338602, 42338702], [42340127, 42340241], [42341641, 42341746], [42343773, 42343923], [42344598, 42344727]]
NM_002466	[[42295658, 42295943], [42302445, 42302539], [42310423, 42310495], [42311433, 42311526], [42315491, 42315712], [42320796, 42320959], [42328396, 42328684], [42331129, 42331543], [42333858, 42333998], [42338602, 42338702], [42340127, 42340241], [42341641, 42341746], [42343773, 42343923], [42344598, 42345136]]	[[42295923, 42295943], [42302445, 42302539], [42310423, 42310495], [42311433, 42311526], [42315491, 42315712], [42320796, 42320959], [42328396, 42328684], [42331129, 42331543], [42333858, 42333998], [42338602, 42338702], [42340127, 42340241], [42341641, 42341746], [42343773, 42343923], [42344598, 42344727]]

Promoter

Chrom	Start	End	Description
chr20	42295713	42295738	CAGE_peak_2_at_MYBL2_5end
chr20	42295745	42295765	CAGE_peak_1_at_MYBL2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr20	GH20I044089	44089951	44090381	1.18	[{'connected_gene': 'SRSF6', 'score': 11.58}, {'connected_gene': 'MYBL2', 'score': 10.09}, {'connected_gene': 'SGK2', 'score': 9.88}, {'connected_gene': 'JPH2', 'score': 5.9}, {'connected_gene': 'GC20P044130', 'score': 0.26}, {'connected_gene': 'RN7SL443P', 'score': 0.18}]
chr20	GH20I043589	43589810	43591789	2.05	[{'connected_gene': 'IFT52', 'score': 574.59}, {'connected_gene': 'ENSG00000282876', 'score': 550.77}, {'connected_gene': 'MYBL2', 'score': 16.09}, {'connected_gene': 'SRSF6', 'score': 14.81}, {'connected_gene': 'GC20P043584', 'score': 0.44}, {'connected_gene': 'RPL27AP', 'score': 0.21}]
chr20	GH20I043721	43721698	43722738	0.86	[{'connected_gene': 'IFT52', 'score': 23.3}, {'connected_gene': 'MYBL2', 'score': 18.48}, {'connected_gene': 'GTSF1L', 'score': 0.77}, {'connected_gene': 'GC20M043632', 'score': 0.34}]
chr20	GH20I043680	43680694	43683513	1.16	[{'connected_gene': 'IFT52', 'score': 24.07}, {'connected_gene': 'MYBL2', 'score': 19.24}, {'connected_gene': 'GC20M043632', 'score': 0.37}]
chr20	GH20I043666	43666187	43668243	1.97	[{'connected_gene': 'MYBL2', 'score': 571.46}, {'connected_gene': 'IFT52', 'score': 24.01}, {'connected_gene': 'SRSF6', 'score': 10.25}, {'connected_gene': 'OSER1', 'score': 9.75}, {'connected_gene': 'GC20M043632', 'score': 0.29}]
chr20	GH20I043662	43662684	43664494	0.52	[{'connected_gene': 'MYBL2', 'score': 12.79}, {'connected_gene': 'GC20P043655', 'score': 0.44}, {'connected_gene': 'GC20M043632', 'score': 0.28}]
chr20	GH20I043665	43665690	43666141	0.46	[{'connected_gene': 'MYBL2', 'score': 569.43}, {'connected_gene': 'GC20P043655', 'score': 0.39}, {'connected_gene': 'GC20M043632', 'score': 0.29}]
chr20	GH20I043679	43679248	43680103	0.31	[{'connected_gene': 'MYBL2', 'score': 15.27}, {'connected_gene': 'GC20M043632', 'score': 0.37}]
chr20	GH20I043652	43652578	43653519	0.9	[{'connected_gene': 'RPL27AP', 'score': 550.77}, {'connected_gene': 'MYBL2', 'score': 12.39}, {'connected_gene': 'IFT52', 'score': 11.04}, {'connected_gene': 'SGK2', 'score': 9.46}, {'connected_gene': 'GC20P043655', 'score': 0.77}, {'connected_gene': 'GC20M043632', 'score': 0.25}]
chr20	GH20I044350	44350562	44358613	1.66	[{'connected_gene': 'LOC105372629', 'score': 561.32}, {'connected_gene': 'GC20P044356', 'score': 550.77}, {'connected_gene': 'HNF4A', 'score': 550.77}, {'connected_gene': 'SRSF6', 'score': 57.31}, {'connected_gene': 'L3MBTL1', 'score': 12.78}, {'connected_gene': 'IFT52', 'score': 10.3}, {'connected_gene': 'OSER1', 'score': 7.84}, {'connected_gene': 'OSER1-AS1', 'score': 5.95}, {'connected_gene': 'MYBL2', 'score': 4.53}, {'connected_gene': 'ENSG00000201363', 'score': 0.44}, {'connected_gene': 'R3HDML', 'score': 0.37}]
chr20	GH20I043583	43583256	43585856	1.14	[{'connected_gene': 'GC20P043584', 'score': 550.77}, {'connected_gene': 'IFT52', 'score': 24.25}, {'connected_gene': 'MYBL2', 'score': 14.49}, {'connected_gene': 'SRSF6', 'score': 11.67}, {'connected_gene': 'SGK2', 'score': 0.31}]
chr20	GH20I043656	43656299	43659059	1.63	[{'connected_gene': 'GC20P043655', 'score': 550.77}, {'connected_gene': 'IFT52', 'score': 28.09}, {'connected_gene': 'MYBL2', 'score': 18.22}, {'connected_gene': 'OSER1', 'score': 18.07}, {'connected_gene': 'SRSF6', 'score': 13.2}, {'connected_gene': 'SGK2', 'score': 10.26}, {'connected_gene': 'L3MBTL1', 'score': 2.82}, {'connected_gene': 'GC20M043632', 'score': 0.26}]
chr20	GH20I043692	43692061	43692210	0.74	[{'connected_gene': 'GC20M043632', 'score': 0.44}, {'connected_gene': 'MYBL2', 'score': 0.31}]
chr20	GH20I043691	43691041	43691190	0.92	[{'connected_gene': 'GC20M043632', 'score': 0.44}, {'connected_gene': 'MYBL2', 'score': 0.34}]
chr20	GH20I043710	43710081	43711523	0.59	[{'connected_gene': 'GC20M043632', 'score': 0.39}, {'connected_gene': 'GTSF1L', 'score': 0.37}, {'connected_gene': 'MYBL2', 'score': 0.26}]