Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000515308 [[71296208, 71296404], [71337931, 71338008], [71339723, 71339735]] None
ENST00000413702 [[71296208, 71296404], [71337931, 71338008], [71339723, 71339792], [71346515, 71348713]] [[71339738, 71339792], [71346515, 71347595]]
ENST00000505411 [[71337674, 71337809], [71337931, 71338008], [71339723, 71339792], [71346515, 71346869]] [[71339738, 71339792], [71346515, 71346869]]
ENST00000456088 [[71337674, 71337809], [71337931, 71338008], [71339723, 71339792], [71346515, 71348713]] [[71339738, 71339792], [71346515, 71347595]]
ENST00000504482 [[71337729, 71338008], [71339723, 71339792], [71346515, 71346742]] None
ENST00000304887 [[71337833, 71338008], [71339723, 71339792], [71346515, 71348714]] [[71339738, 71339792], [71346515, 71347595]]
ENST00000514512 [[71337913, 71338008], [71346515, 71346995]] None
NM_001145006 [[71296208, 71296404], [71337931, 71338008], [71339723, 71339792], [71346515, 71348714]] [[71339738, 71339792], [71346515, 71347595]]
NM_001145007 [[71337674, 71337809], [71337931, 71338008], [71339723, 71339792], [71346515, 71348714]] [[71339738, 71339792], [71346515, 71347595]]
NM_152291 [[71337833, 71338008], [71339723, 71339792], [71346515, 71348714]] [[71339738, 71339792], [71346515, 71347595]]
Promoter
Chrom Start End Description
chr4 71296204 71296214 CAGE_peak_12_at_MUC7_5end
chr4 71337906 71337921 CAGE_peak_1_at_MUC7_5end
chr4 71339721 71339734 CAGE_peak_16_at_MUC7_5end
chr4 71339736 71339746 CAGE_peak_14_at_MUC7_5end
chr4 71339747 71339766 CAGE_peak_8_at_MUC7_5end
chr4 71346531 71346546 CAGE_peak_5_at_MUC7_5end
chr4 71346554 71346567 CAGE_peak_4_at_MUC7_5end
chr4 71346667 71346683 CAGE_peak_3_at_MUC7_5end
chr4 71346692 71346712 CAGE_peak_7_at_MUC7_5end
chr4 71346755 71346788 CAGE_peak_2_at_MUC7_5end
chr4 71346804 71346815 CAGE_peak_10_at_MUC7_5end
chr4 71346826 71346837 CAGE_peak_17_at_MUC7_5end
chr4 71346845 71346854 CAGE_peak_11_at_MUC7_5end
chr4 71346875 71346903 CAGE_peak_6_at_MUC7_5end
chr4 71346907 71346916 CAGE_peak_13_at_MUC7_5end
chr4 71346920 71346938 CAGE_peak_9_at_MUC7_5end
chr4 71347019 71347033 CAGE_peak_18_at_MUC7_5end
chr4 71347047 71347054 CAGE_peak_19_at_MUC7_5end
chr4 71347086 71347104 CAGE_peak_15_at_MUC7_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr4 GH04I070397 70397891 70397950 0.5 [{'connected_gene': 'OPRPN', 'score': 550.77}, {'connected_gene': 'MUC7', 'score': 0.29}]
chr4 GH04I070430 70430443 70430502 0.5 [{'connected_gene': 'MUC7', 'score': 550.77}, {'connected_gene': 'OPRPN', 'score': 0.29}]
chr4 GH04I070472 70472148 70472207 0.5 [{'connected_gene': 'MUC7', 'score': 550.26}, {'connected_gene': 'AMTN', 'score': 0.25}]
chr4 GH04I070471 70471909 70471968 0.5 [{'connected_gene': 'MUC7', 'score': 550.26}, {'connected_gene': 'AMTN', 'score': 0.25}]

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