PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000368141	[[158801106, 158801347], [158811923, 158812208], [158813068, 158813205], [158813744, 158813912], [158815376, 158815793], [158817517, 158817706], [158818979, 158819294]]	[[158811943, 158812208], [158813068, 158813205], [158813744, 158813912], [158815376, 158815793], [158817517, 158817706], [158818979, 158819027]]
ENST00000491210	[[158801140, 158801347], [158811923, 158812513]]	None
ENST00000438394	[[158815690, 158815793], [158817517, 158817679], [158818979, 158819296]]	[[158815690, 158815793], [158817517, 158817679], [158818979, 158819027]]
NM_002432	[[158801167, 158801347], [158811923, 158812208], [158813068, 158813205], [158813744, 158813912], [158815376, 158815793], [158817517, 158817706], [158818979, 158819270]]	[[158811943, 158812208], [158813068, 158813205], [158813744, 158813912], [158815376, 158815793], [158817517, 158817706], [158818979, 158819027]]

Promoter

Chrom	Start	End	Description
chr1	158801095	158801178	CAGE_peak_1_at_MNDA_5end
chr1	158801181	158801192	CAGE_peak_3_at_MNDA_5end
chr1	158801195	158801202	CAGE_peak_5_at_MNDA_5end
chr1	158801209	158801216	CAGE_peak_2_at_MNDA_5end
chr1	158801218	158801220	CAGE_peak_9_at_MNDA_5end
chr1	158801238	158801255	CAGE_peak_4_at_MNDA_5end
chr1	158815389	158815400	CAGE_peak_11_at_MNDA_5end
chr1	158815444	158815459	CAGE_peak_8_at_MNDA_5end
chr1	158815524	158815535	CAGE_peak_7_at_MNDA_5end
chr1	158815588	158815607	CAGE_peak_6_at_MNDA_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I158808	158808601	158811200	0.79	[{'connected_gene': 'OR10AA1P', 'score': 550.77}, {'connected_gene': 'MNDA', 'score': 14.81}, {'connected_gene': 'OR6N2', 'score': 11.29}, {'connected_gene': 'OR6N1', 'score': 10.41}, {'connected_gene': 'OR6K2', 'score': 9.47}, {'connected_gene': 'PYHIN1', 'score': 1.82}, {'connected_gene': 'IFI16', 'score': 1.23}]
chr1	GH01I158811	158811801	158814000	0.4	[{'connected_gene': 'OR6N2', 'score': 10.46}, {'connected_gene': 'MNDA', 'score': 4.72}, {'connected_gene': 'OR10AA1P', 'score': 0.77}]
chr1	GH01I159084	159084401	159085290	0.79	[{'connected_gene': 'MNDA', 'score': 24.13}, {'connected_gene': 'AIM2', 'score': 8.13}, {'connected_gene': 'IFI16', 'score': 2.69}, {'connected_gene': 'RAD1P2', 'score': 0.77}, {'connected_gene': 'GC01M159143', 'score': 0.22}, {'connected_gene': 'TRR-TCT4-1', 'score': 0.22}]
chr1	GH01I158818	158818401	158820469	1.61	[{'connected_gene': 'MNDA', 'score': 17.09}, {'connected_gene': 'CD1D', 'score': 4.5}, {'connected_gene': 'PYHIN1', 'score': 1.31}, {'connected_gene': 'IFI16', 'score': 1.21}, {'connected_gene': 'OR10AA1P', 'score': 0.39}]
chr1	GH01I158829	158829961	158833736	1.83	[{'connected_gene': 'MNDA', 'score': 550.77}, {'connected_gene': 'OR6N2', 'score': 9.97}, {'connected_gene': 'PYHIN5P', 'score': 0.25}]
chr1	GH01I158834	158834201	158840800	1.07	[{'connected_gene': 'MNDA', 'score': 8.57}, {'connected_gene': 'IFI16', 'score': 1.24}, {'connected_gene': 'PYHIN5P', 'score': 0.26}]
chr1	GH01I158800	158800201	158804400	1	[{'connected_gene': 'MNDA', 'score': 25.29}, {'connected_gene': 'OR6N1', 'score': 11.2}, {'connected_gene': 'OR6N2', 'score': 11.09}, {'connected_gene': 'PYHIN1', 'score': 1.75}, {'connected_gene': 'IFI16', 'score': 1.35}, {'connected_gene': 'OR2AQ1P', 'score': 0.44}, {'connected_gene': 'OR10AA1P', 'score': 0.44}]
chr1	GH01I158845	158845311	158848714	0.31	[{'connected_gene': 'MNDA', 'score': 11.41}, {'connected_gene': 'OR6N1', 'score': 10.51}, {'connected_gene': 'OR6N2', 'score': 10.42}, {'connected_gene': 'OR10X1', 'score': 9.8}, {'connected_gene': 'ELL2P1', 'score': 4.95}, {'connected_gene': 'PYHIN5P', 'score': 0.29}]
chr1	GH01I159024	159024897	159025358	0.49	[{'connected_gene': 'OR6N1', 'score': 3.98}, {'connected_gene': 'OR6K3', 'score': 3.46}, {'connected_gene': 'FCER1A', 'score': 3.11}, {'connected_gene': 'OR6N2', 'score': 2.63}, {'connected_gene': 'OR10Z1', 'score': 2.59}, {'connected_gene': 'IFI16', 'score': 2.2}, {'connected_gene': 'OR10X1', 'score': 2.02}, {'connected_gene': 'OR6P1', 'score': 1.48}, {'connected_gene': 'MNDA', 'score': 1.27}, {'connected_gene': 'GC01M159011', 'score': 0.39}, {'connected_gene': 'LOC105371461', 'score': 0.29}]