PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000554752	[[71189242, 71197581], [71199255, 71200059], [71201102, 71201215], [71202677, 71202746], [71204961, 71205115], [71206758, 71206881], [71209067, 71209308], [71215545, 71215721], [71216649, 71216798], [71227718, 71227899], [71267383, 71267797], [71275482, 71275888]]	[[71197096, 71197581], [71199255, 71200059], [71201102, 71201215], [71202677, 71202746], [71204961, 71205115], [71206758, 71206881], [71209067, 71209308], [71215545, 71215721], [71216649, 71216798], [71227718, 71227899], [71267383, 71267797], [71275482, 71275888]]
ENST00000555993	[[71196367, 71197581], [71199255, 71200059], [71200473, 71200515], [71201102, 71201215], [71202677, 71202746], [71204961, 71205115], [71206758, 71206881], [71209067, 71209308], [71215545, 71215721], [71216649, 71216798], [71227718, 71227899], [71267383, 71267797], [71275482, 71276251]]	[[71197096, 71197581], [71199255, 71200059], [71200473, 71200515], [71201102, 71201215], [71202677, 71202746], [71204961, 71205115], [71206758, 71206881], [71209067, 71209308], [71215545, 71215721], [71216649, 71216798], [71227718, 71227899], [71267383, 71267797], [71275482, 71275888]]
ENST00000553414	[[71196382, 71197581], [71199255, 71200059], [71200473, 71200515], [71201102, 71201215], [71204961, 71205115], [71206614, 71206881], [71209067, 71209308], [71215545, 71215721], [71216649, 71216798], [71227718, 71227899], [71249939, 71250157]]	[[71197096, 71197581], [71199255, 71200059], [71200473, 71200515], [71201102, 71201215], [71204961, 71205115], [71206614, 71206881], [71209067, 71209308], [71215545, 71215721], [71216649, 71216798], [71227718, 71227801]]
ENST00000381250	[[71196652, 71197581], [71199255, 71200059], [71201102, 71201215], [71204961, 71205115], [71206758, 71206881], [71209067, 71209308], [71215545, 71215721], [71216649, 71216798], [71227718, 71227899], [71267383, 71267797], [71275482, 71276223]]	[[71197096, 71197581], [71199255, 71200059], [71201102, 71201215], [71204961, 71205115], [71206758, 71206881], [71209067, 71209308], [71215545, 71215721], [71216649, 71216798], [71227718, 71227899], [71267383, 71267797], [71275482, 71275888]]
ENST00000554146	[[71196851, 71197581], [71199255, 71200059], [71200473, 71200515], [71201102, 71201215], [71204961, 71205115], [71206758, 71206881], [71209067, 71209308], [71215545, 71215721], [71216649, 71216798], [71227718, 71227899], [71232158, 71232204], [71249939, 71250162]]	[[71197096, 71197581], [71199255, 71200059], [71200473, 71200515], [71201102, 71201215], [71204961, 71205115], [71206758, 71206881], [71209067, 71209308], [71215545, 71215721], [71216649, 71216798], [71227718, 71227899], [71232158, 71232189]]
ENST00000554024	[[71216269, 71216798], [71219654, 71219673]]	None
NM_001284231	[[71189242, 71197581], [71199255, 71200059], [71200473, 71200515], [71201102, 71201215], [71204961, 71205115], [71206614, 71206881], [71209067, 71209308], [71215545, 71215721], [71216649, 71216798], [71227718, 71227899], [71232158, 71232204], [71249939, 71250169]]	[[71197096, 71197581], [71199255, 71200059], [71200473, 71200515], [71201102, 71201215], [71204961, 71205115], [71206614, 71206881], [71209067, 71209308], [71215545, 71215721], [71216649, 71216798], [71227718, 71227899], [71232158, 71232189]]
NM_001284232	[[71189242, 71197581], [71199255, 71200059], [71200473, 71200515], [71201102, 71201215], [71204961, 71205115], [71206614, 71206881], [71209067, 71209308], [71215545, 71215721], [71216649, 71216798], [71227718, 71227899], [71249939, 71250169]]	[[71197096, 71197581], [71199255, 71200059], [71200473, 71200515], [71201102, 71201215], [71204961, 71205115], [71206614, 71206881], [71209067, 71209308], [71215545, 71215721], [71216649, 71216798], [71227718, 71227801]]
NM_033141	[[71189242, 71197581], [71199255, 71200059], [71200473, 71200515], [71201102, 71201215], [71202677, 71202746], [71204961, 71205115], [71206758, 71206881], [71209067, 71209308], [71215545, 71215721], [71216649, 71216798], [71227718, 71227899], [71267383, 71267797], [71275482, 71275888]]	[[71197096, 71197581], [71199255, 71200059], [71200473, 71200515], [71201102, 71201215], [71202677, 71202746], [71204961, 71205115], [71206758, 71206881], [71209067, 71209308], [71215545, 71215721], [71216649, 71216798], [71227718, 71227899], [71267383, 71267797], [71275482, 71275888]]
NM_001284230	[[71189242, 71197581], [71199255, 71200059], [71201102, 71201215], [71202677, 71202746], [71204961, 71205115], [71206758, 71206881], [71209067, 71209308], [71215545, 71215721], [71216649, 71216798], [71227718, 71227899], [71267383, 71267797], [71275482, 71275888]]	[[71197096, 71197581], [71199255, 71200059], [71201102, 71201215], [71202677, 71202746], [71204961, 71205115], [71206758, 71206881], [71209067, 71209308], [71215545, 71215721], [71216649, 71216798], [71227718, 71227899], [71267383, 71267797], [71275482, 71275888]]

Promoter

Chrom	Start	End	Description
chr14	71276211	71276255	CAGE_peak_1_at_MAP3K9_5end
chr14	71276268	71276283	CAGE_peak_2_at_MAP3K9_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I070807	70807744	70812554	1.98	[{'connected_gene': 'MAP3K9', 'score': 560.2}, {'connected_gene': 'LOC100506411', 'score': 550.77}, {'connected_gene': 'ADAM20', 'score': 12.43}, {'connected_gene': 'ENSG00000275630', 'score': 0.39}]
chr14	GH14I070780	70780601	70781127	0.66	[{'connected_gene': 'MAP3K9', 'score': 12.54}, {'connected_gene': 'LOC100506411', 'score': 0.31}, {'connected_gene': 'PIR58438', 'score': 0.25}, {'connected_gene': 'GC14M070761', 'score': 0.25}]
chr14	GH14I070783	70783380	70783439	0.7	[{'connected_gene': 'MAP3K9', 'score': 562.54}, {'connected_gene': 'LOC100506411', 'score': 0.31}, {'connected_gene': 'PIR58438', 'score': 0.23}, {'connected_gene': 'GC14M070761', 'score': 0.23}]
chr14	GH14I070786	70786577	70786863	0.65	[{'connected_gene': 'MAP3K9', 'score': 10.64}, {'connected_gene': 'LOC100506411', 'score': 0.34}, {'connected_gene': 'PIR58438', 'score': 0.23}, {'connected_gene': 'GC14M070761', 'score': 0.23}]
chr14	GH14I070785	70785684	70785833	0.51	[{'connected_gene': 'MAP3K9', 'score': 12.33}, {'connected_gene': 'LOC100506411', 'score': 0.34}, {'connected_gene': 'PIR58438', 'score': 0.23}, {'connected_gene': 'GC14M070761', 'score': 0.23}]
chr14	GH14I070781	70781140	70783362	0.93	[{'connected_gene': 'MAP3K9', 'score': 26.43}, {'connected_gene': 'LOC100506411', 'score': 0.31}, {'connected_gene': 'PIR58438', 'score': 0.25}, {'connected_gene': 'GC14M070761', 'score': 0.25}]
chr14	GH14I070784	70784544	70785600	0.51	[{'connected_gene': 'MAP3K9', 'score': 21.91}, {'connected_gene': 'LOC100506411', 'score': 0.34}, {'connected_gene': 'PIR58438', 'score': 0.23}, {'connected_gene': 'GC14M070761', 'score': 0.23}]
chr14	GH14I070771	70771244	70771993	0.63	[{'connected_gene': 'MAP3K9', 'score': 8.64}, {'connected_gene': 'LOC100506411', 'score': 0.28}, {'connected_gene': 'PIR58438', 'score': 0.28}, {'connected_gene': 'GC14M070761', 'score': 0.28}]
chr14	GH14I070788	70788823	70790085	0.83	[{'connected_gene': 'MAP3K9', 'score': 12.78}, {'connected_gene': 'LOC100506411', 'score': 0.37}, {'connected_gene': 'PIR58438', 'score': 0.22}, {'connected_gene': 'GC14M070761', 'score': 0.22}]
chr14	GH14I070769	70769898	70771239	0.63	[{'connected_gene': 'MAP3K9', 'score': 9.97}, {'connected_gene': 'LOC100506411', 'score': 0.28}, {'connected_gene': 'PIR58438', 'score': 0.28}, {'connected_gene': 'GC14M070761', 'score': 0.28}]
chr14	GH14I070766	70765757	70765816	0.5	[{'connected_gene': 'MAP3K9', 'score': 550.26}, {'connected_gene': 'PIR58438', 'score': 0.29}, {'connected_gene': 'GC14M070761', 'score': 0.29}, {'connected_gene': 'LOC100506411', 'score': 0.26}]
chr14	GH14I070752	70752825	70754096	0.83	[{'connected_gene': 'MAP3K9', 'score': 8.96}, {'connected_gene': 'PIR58438', 'score': 0.34}, {'connected_gene': 'GC14M070761', 'score': 0.34}, {'connected_gene': 'LOC100506411', 'score': 0.22}]
chr14	GH14I070765	70765382	70765441	0.5	[{'connected_gene': 'MAP3K9', 'score': 550.26}, {'connected_gene': 'PIR58438', 'score': 0.29}, {'connected_gene': 'GC14M070761', 'score': 0.29}, {'connected_gene': 'LOC100506411', 'score': 0.26}]
chr14	GH14I070837	70837419	70839321	0.43	[{'connected_gene': 'MAP3K9', 'score': 8.16}, {'connected_gene': 'ENSG00000275630', 'score': 0.37}, {'connected_gene': 'LOC100287335', 'score': 0.34}]
chr14	GH14I070817	70817401	70818199	1.12	[{'connected_gene': 'MAP3K9', 'score': 9.95}, {'connected_gene': 'ENSG00000275630', 'score': 0.77}]
chr14	GH14I070700	70700801	70701400	0.51	[{'connected_gene': 'TTC9', 'score': 4.85}, {'connected_gene': 'MAP3K9', 'score': 4.28}, {'connected_gene': 'LINC01269', 'score': 0.77}, {'connected_gene': 'GC14P070715', 'score': 0.39}]
chr14	GH14I070842	70842338	70843458	0.46	[{'connected_gene': 'PCNX1', 'score': 11.37}, {'connected_gene': 'MAP3K9', 'score': 8.13}, {'connected_gene': 'LOC100287335', 'score': 0.37}, {'connected_gene': 'ENSG00000275630', 'score': 0.34}]
chr14	GH14I070831	70831932	70833393	0.2	[{'connected_gene': 'PCNX1', 'score': 11.28}, {'connected_gene': 'MAP3K9', 'score': 7.86}, {'connected_gene': 'ENSG00000275630', 'score': 0.39}, {'connected_gene': 'LOC100287335', 'score': 0.31}]
chr14	GH14I070826	70826867	70829107	0.93	[{'connected_gene': 'PCNX1', 'score': 11.27}, {'connected_gene': 'MAP3K9', 'score': 8.31}, {'connected_gene': 'ENSG00000275630', 'score': 0.44}, {'connected_gene': 'LOC100287335', 'score': 0.29}]
chr14	GH14I070856	70856374	70858006	0.38	[{'connected_gene': 'PCNX1', 'score': 11.26}, {'connected_gene': 'MAP3K9', 'score': 8.1}, {'connected_gene': 'LOC100287335', 'score': 0.77}, {'connected_gene': 'ENSG00000275630', 'score': 0.28}]
chr14	GH14I070803	70803444	70803593	0.71	[{'connected_gene': 'LOC100506411', 'score': 0.44}, {'connected_gene': 'MAP3K9', 'score': 0.44}, {'connected_gene': 'PIR58438', 'score': 0.19}, {'connected_gene': 'GC14M070761', 'score': 0.19}]
chr14	GH14I070812	70812601	70812800	0.38	[{'connected_gene': 'LOC100506411', 'score': 0.77}, {'connected_gene': 'MAP3K9', 'score': 0.77}, {'connected_gene': 'ENSG00000275630', 'score': 0.44}]
chr14	GH14I070722	70722914	70727178	0.31	[{'connected_gene': 'GC14M070723', 'score': 550.77}, {'connected_gene': 'PIR55626', 'score': 550.77}, {'connected_gene': 'PIR61048', 'score': 550.77}, {'connected_gene': 'PIR52388', 'score': 550.77}, {'connected_gene': 'PIR36063', 'score': 550.77}, {'connected_gene': 'GC14M070764', 'score': 550.77}, {'connected_gene': 'GC14M070763', 'score': 550.77}, {'connected_gene': 'GC14M070765', 'score': 550.77}, {'connected_gene': 'MAP3K9', 'score': 11.35}, {'connected_gene': 'MED6', 'score': 10.92}, {'connected_gene': 'GC14P070715', 'score': 0.44}]
chr14	GH14I070732	70732204	70732353	0.4	[{'connected_gene': 'PIR58438', 'score': 550.77}, {'connected_gene': 'GC14M070761', 'score': 550.77}, {'connected_gene': 'PIR38389', 'score': 0.77}, {'connected_gene': 'MAP3K9', 'score': 0.18}]
chr14	GH14I070744	70744625	70745329	0.2	[{'connected_gene': 'PIR58438', 'score': 0.39}, {'connected_gene': 'GC14M070761', 'score': 0.39}, {'connected_gene': 'LOC100506411', 'score': 0.21}, {'connected_gene': 'MAP3K9', 'score': 0.21}]
chr14	GH14I070754	70754624	70756665	0.79	[{'connected_gene': 'PIR58438', 'score': 0.34}, {'connected_gene': 'GC14M070761', 'score': 0.34}, {'connected_gene': 'LOC100506411', 'score': 0.23}, {'connected_gene': 'MAP3K9', 'score': 0.23}]
chr14	GH14I070821	70821600	70823682	1.38	[{'connected_gene': 'ENSG00000275630', 'score': 550.77}, {'connected_gene': 'MED6', 'score': 22.59}, {'connected_gene': 'PTTG4P', 'score': 11.36}, {'connected_gene': 'MAP3K9', 'score': 10.28}, {'connected_gene': 'RPL7AP6', 'score': 9.9}, {'connected_gene': 'LOC100287335', 'score': 0.28}]