PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000382172	[[24304327, 24304584], [24330683, 24330757], [24334234, 24334356], [24380088, 24380208], [24383988, 24384063], [24410378, 24410488], [24411690, 24411895], [24413787, 24413865], [24415473, 24415627], [24432998, 24433051], [24436440, 24436501], [24438279, 24438328], [24443430, 24443587], [24444151, 24444334], [24448984, 24449048], [24453406, 24453493], [24455837, 24455926], [24460471, 24460645], [24463270, 24463558]]	[[24304486, 24304584], [24330683, 24330757], [24334234, 24334356], [24380088, 24380208], [24383988, 24384063], [24410378, 24410488], [24411690, 24411895], [24413787, 24413865], [24415473, 24415627], [24432998, 24433051], [24436440, 24436501], [24438279, 24438328], [24443430, 24443587], [24444151, 24444334], [24448984, 24449048], [24453406, 24453493], [24455837, 24455926], [24460471, 24460645], [24463270, 24463459]]
ENST00000464194	[[24304327, 24304584], [24330683, 24330969]]	None
ENST00000433710	[[24304327, 24304584], [24330683, 24330757], [24334234, 24334356], [24334671, 24334712]]	[[24304545, 24304584], [24330683, 24330757], [24334234, 24334356], [24334671, 24334712]]
ENST00000494139	[[24416408, 24416708], [24432998, 24433051], [24436440, 24436501], [24438279, 24438328], [24443430, 24443587], [24444151, 24444334]]	None
ENST00000469167	[[24455837, 24455926], [24460471, 24460645], [24462816, 24463537]]	None
NM_005932	[[24304327, 24304584], [24330683, 24330757], [24334234, 24334356], [24380088, 24380208], [24383988, 24384063], [24410378, 24410488], [24411690, 24411895], [24413787, 24413865], [24415473, 24415627], [24432998, 24433051], [24436440, 24436501], [24438279, 24438328], [24443430, 24443587], [24444151, 24444334], [24448984, 24449048], [24453406, 24453493], [24455837, 24455926], [24460471, 24460645], [24463270, 24463587]]	[[24304486, 24304584], [24330683, 24330757], [24334234, 24334356], [24380088, 24380208], [24383988, 24384063], [24410378, 24410488], [24411690, 24411895], [24413787, 24413865], [24415473, 24415627], [24432998, 24433051], [24436440, 24436501], [24438279, 24438328], [24443430, 24443587], [24444151, 24444334], [24448984, 24449048], [24453406, 24453493], [24455837, 24455926], [24460471, 24460645], [24463270, 24463459]]

Promoter

Chrom	Start	End	Description
chr13	24463456	24463528	CAGE_peak_2_at_MIPEP_5end
chr13	24463530	24463592	CAGE_peak_1_at_MIPEP_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I023578	23578505	23581085	1.97	[{'connected_gene': 'TNFRSF19', 'score': 550.44}, {'connected_gene': 'C1QTNF9B', 'score': 10.28}, {'connected_gene': 'MIPEP', 'score': 10.05}, {'connected_gene': 'PCOTH', 'score': 10.05}, {'connected_gene': 'LOC105370114', 'score': 0.12}]
chr13	GH13I023762	23762369	23764047	0.2	[{'connected_gene': 'TNFRSF19', 'score': 9.4}, {'connected_gene': 'C1QTNF9', 'score': 7.12}, {'connected_gene': 'MIPEP', 'score': 6.81}, {'connected_gene': 'MTCO3P2', 'score': 0.77}, {'connected_gene': 'PIR57166', 'score': 0.25}]
chr13	GH13I023859	23859308	23859421	0.46	[{'connected_gene': 'PCOTH', 'score': 0.31}, {'connected_gene': 'MIPEP', 'score': 0.29}, {'connected_gene': 'MTCO3P2', 'score': 0.16}]
chr13	GH13I023769	23769183	23772824	0.96	[{'connected_gene': 'MIPEP', 'score': 10.5}, {'connected_gene': 'TNFRSF19', 'score': 9.62}, {'connected_gene': 'C1QTNF9', 'score': 4.75}, {'connected_gene': 'MTCO3P2', 'score': 0.77}, {'connected_gene': 'PCOTH', 'score': 0.13}]
chr13	GH13I023608	23608043	23610999	1.05	[{'connected_gene': 'MIPEP', 'score': 11.22}, {'connected_gene': 'PCOTH', 'score': 11.22}, {'connected_gene': 'C1QTNF9B', 'score': 11.22}, {'connected_gene': 'TNFRSF19', 'score': 10.51}, {'connected_gene': 'LOC105370114', 'score': 0.14}]
chr13	GH13I023504	23504584	23508235	1.09	[{'connected_gene': 'MIPEP', 'score': 11.27}, {'connected_gene': 'PCOTH', 'score': 11.27}, {'connected_gene': 'C1QTNF9B', 'score': 11.27}, {'connected_gene': 'TNFRSF19', 'score': 11.22}, {'connected_gene': 'LINC00352', 'score': 0.44}, {'connected_gene': 'PIR60894', 'score': 0.31}]
chr13	GH13I023887	23887795	23890292	2.03	[{'connected_gene': 'MIPEP', 'score': 562.0}, {'connected_gene': 'PCOTH', 'score': 550.77}, {'connected_gene': 'C1QTNF9', 'score': 43.24}]
chr13	GH13I023860	23859582	23859731	0.62	[{'connected_gene': 'MIPEP', 'score': 0.31}, {'connected_gene': 'PCOTH', 'score': 0.31}, {'connected_gene': 'MTCO3P2', 'score': 0.16}]
chr13	GH13I023749	23749870	23755311	1.19	[{'connected_gene': 'MIPEP', 'score': 9.38}, {'connected_gene': 'C1QTNF9', 'score': 4.77}, {'connected_gene': 'MTCO3P2', 'score': 0.39}, {'connected_gene': 'PIR57166', 'score': 0.28}]
chr13	GH13I023789	23789636	23792199	0.87	[{'connected_gene': 'MIPEP', 'score': 11.09}, {'connected_gene': 'MTCO3P2', 'score': 0.34}, {'connected_gene': 'PCOTH', 'score': 0.15}]
chr13	GH13I023748	23748116	23748864	0.38	[{'connected_gene': 'MIPEP', 'score': 10.02}, {'connected_gene': 'MTCO3P2', 'score': 0.37}, {'connected_gene': 'PIR57166', 'score': 0.29}]
chr13	GH13I023468	23468864	23471435	0.59	[{'connected_gene': 'C1QTNF9B', 'score': 11.97}, {'connected_gene': 'MIPEP', 'score': 11.72}, {'connected_gene': 'PCOTH', 'score': 11.72}, {'connected_gene': 'SACS', 'score': 11.27}, {'connected_gene': 'TNFRSF19', 'score': 10.4}, {'connected_gene': 'LINC00327', 'score': 0.77}, {'connected_gene': 'LINC00352', 'score': 0.31}]
chr13	GH13I023903	23903201	23903800	0.31	[{'connected_gene': 'C1QTNF9B', 'score': 550.77}, {'connected_gene': 'C1QTNF9', 'score': 15.23}, {'connected_gene': 'MIPEP', 'score': 9.63}, {'connected_gene': 'PIR57853', 'score': 0.26}]
chr13	GH13I023805	23805792	23808699	0.95	[{'connected_gene': 'C1QTNF9', 'score': 27.18}, {'connected_gene': 'TNFRSF19', 'score': 9.14}, {'connected_gene': 'MIPEP', 'score': 8.74}, {'connected_gene': 'MTCO3P2', 'score': 0.26}, {'connected_gene': 'PCOTH', 'score': 0.18}]
chr13	GH13I023848	23848162	23849490	0.31	[{'connected_gene': 'C1QTNF9', 'score': 28.33}, {'connected_gene': 'MIPEP', 'score': 11.67}, {'connected_gene': 'TNFRSF19', 'score': 9.96}, {'connected_gene': 'PCOTH', 'score': 0.26}, {'connected_gene': 'MTCO3P2', 'score': 0.18}]
chr13	GH13I023866	23866304	23869579	1.14	[{'connected_gene': 'C1QTNF9', 'score': 39.85}, {'connected_gene': 'MIPEP', 'score': 21.1}, {'connected_gene': 'PCOTH', 'score': 11.96}, {'connected_gene': 'C1QTNF9B', 'score': 11.91}, {'connected_gene': 'TNFRSF19', 'score': 10.34}, {'connected_gene': 'MTCO3P2', 'score': 0.15}]
chr13	GH13I023899	23899702	23900000	0.74	[{'connected_gene': 'C1QTNF9', 'score': 14.37}, {'connected_gene': 'MIPEP', 'score': 10.34}, {'connected_gene': 'C1QTNF9B', 'score': 0.77}]
chr13	GH13I023897	23897506	23899369	0.38	[{'connected_gene': 'C1QTNF9', 'score': 38.58}, {'connected_gene': 'MIPEP', 'score': 10.6}, {'connected_gene': 'C1QTNF9B', 'score': 0.77}]
chr13	GH13I023722	23722382	23725476	0.63	[{'connected_gene': 'C1QTNF9', 'score': 19.01}, {'connected_gene': 'MIPEP', 'score': 5.37}, {'connected_gene': 'LOC105370113', 'score': 0.44}, {'connected_gene': 'PIR57166', 'score': 0.44}, {'connected_gene': 'MTCO3P2', 'score': 0.26}]
chr13	GH13I023719	23719126	23719779	0.43	[{'connected_gene': 'C1QTNF9', 'score': 6.68}, {'connected_gene': 'MIPEP', 'score': 4.96}, {'connected_gene': 'LOC105370113', 'score': 0.77}, {'connected_gene': 'PIR57166', 'score': 0.77}, {'connected_gene': 'MTCO3P2', 'score': 0.25}]
chr13	GH13I023792	23792629	23797485	1.18	[{'connected_gene': 'C1QTNF9', 'score': 26.39}, {'connected_gene': 'MIPEP', 'score': 8.97}, {'connected_gene': 'MTCO3P2', 'score': 0.31}, {'connected_gene': 'PCOTH', 'score': 0.16}]
chr13	GH13I023799	23799132	23801644	1.04	[{'connected_gene': 'C1QTNF9', 'score': 21.57}, {'connected_gene': 'MIPEP', 'score': 8.56}, {'connected_gene': 'MTCO3P2', 'score': 0.29}, {'connected_gene': 'PCOTH', 'score': 0.17}]
chr13	GH13I023776	23776705	23779221	1.04	[{'connected_gene': 'C1QTNF9', 'score': 24.43}, {'connected_gene': 'MIPEP', 'score': 10.27}, {'connected_gene': 'MTCO3P2', 'score': 0.39}, {'connected_gene': 'PCOTH', 'score': 0.14}]
chr13	GH13I023810	23810581	23812636	0.63	[{'connected_gene': 'C1QTNF9', 'score': 26.64}, {'connected_gene': 'MTCO3P2', 'score': 0.25}, {'connected_gene': 'MIPEP', 'score': 0.18}, {'connected_gene': 'PCOTH', 'score': 0.18}]
chr13	GH13I023460	23460601	23461000	0.54	[{'connected_gene': 'SACS', 'score': 11.96}, {'connected_gene': 'MIPEP', 'score': 11.35}, {'connected_gene': 'PCOTH', 'score': 11.35}, {'connected_gene': 'C1QTNF9B', 'score': 11.35}, {'connected_gene': 'TNFRSF19', 'score': 9.96}, {'connected_gene': 'LINC00327', 'score': 0.44}]
chr13	GH13I023372	23372012	23380327	2.14	[{'connected_gene': 'SACS', 'score': 558.64}, {'connected_gene': 'MIPEP', 'score': 11.07}, {'connected_gene': 'PCOTH', 'score': 11.07}, {'connected_gene': 'C1QTNF9B', 'score': 11.07}, {'connected_gene': 'RPLP1P13', 'score': 0.77}, {'connected_gene': 'SACS-AS1', 'score': 0.26}]
chr13	GH13I023766	23766462	23766611	0.52	[{'connected_gene': 'MTCO3P2', 'score': 550.77}, {'connected_gene': 'TNFRSF19', 'score': 9.59}, {'connected_gene': 'MIPEP', 'score': 0.13}, {'connected_gene': 'PCOTH', 'score': 0.13}]
chr13	GH13I023743	23743822	23743971	0.57	[{'connected_gene': 'MTCO3P2', 'score': 0.34}, {'connected_gene': 'PIR57166', 'score': 0.31}, {'connected_gene': 'MIPEP', 'score': 0.11}]
chr13	GH13I023744	23743322	23743491	0.49	[{'connected_gene': 'MTCO3P2', 'score': 0.34}, {'connected_gene': 'PIR57166', 'score': 0.31}, {'connected_gene': 'MIPEP', 'score': 0.11}]
chr13	GH13I023465	23465989	23467989	1.38	[{'connected_gene': 'LINC00327', 'score': 550.77}, {'connected_gene': 'C1QTNF9B', 'score': 11.97}, {'connected_gene': 'MIPEP', 'score': 11.72}, {'connected_gene': 'PCOTH', 'score': 11.72}, {'connected_gene': 'TNFRSF19', 'score': 10.4}, {'connected_gene': 'LINC00352', 'score': 0.29}]