Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000333055 [[180217540, 180220097], [180235647, 180236066], [180242413, 180242541]] [[180218633, 180219971]]
ENST00000307826 [[180217542, 180220097], [180229679, 180229885]] [[180218633, 180219971]]
ENST00000446023 [[180217547, 180220097], [180235647, 180236076], [180236633, 180236829]] [[180218633, 180219971]]
ENST00000393340 [[180217547, 180220097], [180235647, 180235810], [180236009, 180236076], [180237191, 180237456]] [[180218633, 180219971]]
ENST00000427865 [[180218481, 180220097], [180230601, 180230904]] [[180218633, 180219971]]
ENST00000504671 [[180219372, 180220097], [180222837, 180222875], [180229679, 180229794]] [[180219372, 180219971]]
ENST00000506889 [[180219510, 180220097], [180235647, 180236076], [180237039, 180237127]] [[180219510, 180219971]]
ENST00000514283 [[180219589, 180220097], [180230812, 180230923]] [[180219589, 180219971]]
ENST00000512695 [[180219624, 180220097], [180230405, 180230481]] [[180219624, 180219971]]
ENST00000506269 [[180219637, 180220097], [180230295, 180230399]] [[180219637, 180219971]]
ENST00000514438 [[180219657, 180220097], [180242413, 180242580]] [[180219657, 180219971]]
ENST00000502678 [[180219661, 180220097], [180235501, 180235758]] [[180219661, 180219971]]
ENST00000513431 [[180219685, 180220097], [180242424, 180242567]] [[180219685, 180219971]]
ENST00000507384 [[180219869, 180220097], [180222655, 180222875], [180229679, 180229803]] [[180219869, 180219971]]
ENST00000504385 [[180220061, 180220097], [180235501, 180235597], [180235885, 180236076], [180236633, 180236850]] None
ENST00000514760 [[180222405, 180222875], [180242424, 180242567]] None
ENST00000505682 [[180222429, 180222875], [180229679, 180229767]] None
ENST00000512080 [[180235525, 180235594], [180235885, 180236076], [180237648, 180237920]] None
ENST00000510341 [[180235835, 180236076], [180237191, 180237503]] None
ENST00000508702 [[180235837, 180236076], [180237431, 180237505]] None
ENST00000513149 [[180235838, 180236066], [180242413, 180242541]] None
ENST00000510962 [[180235840, 180236075], [180237728, 180237938]] None
ENST00000508090 [[180235840, 180236076], [180242413, 180242652]] None
ENST00000506708 [[180235843, 180236076], [180236363, 180236875]] None
ENST00000506033 [[180236013, 180236076], [180237039, 180237440]] None
NM_002406 [[180217540, 180220097], [180229679, 180230048]] [[180218633, 180219971]]
NM_001114620 [[180217540, 180220097], [180230601, 180230902]] [[180218633, 180219971]]
NM_001114619 [[180217540, 180220097], [180230812, 180230902]] [[180218633, 180219971]]
NM_001114618 [[180217540, 180220097], [180235647, 180236076], [180236633, 180236817]] [[180218633, 180219971]]
NM_001114617 [[180217540, 180220097], [180235647, 180236076], [180237039, 180237137]] [[180218633, 180219971]]
Promoter
Chrom Start End Description
chr5 180229791 180229829 CAGE_peak_1_at_MGAT1_5end
chr5 180229833 180229860 CAGE_peak_3_at_MGAT1_5end
chr5 180230830 180230903 CAGE_peak_2_at_MGAT1_5end
chr5 180235715 180235753 CAGE_peak_14_at_MGAT1_5end
chr5 180235755 180235789 CAGE_peak_8_at_MGAT1_5end
chr5 180236453 180236465 CAGE_peak_36_at_MGAT1_5end
chr5 180236811 180236880 CAGE_peak_4_at_MGAT1_5end
chr5 180237082 180237148 CAGE_peak_5_at_MGAT1_5end
chr5 180237414 180237429 CAGE_peak_11_at_MGAT1_5end
chr5 180237445 180237462 CAGE_peak_10_at_MGAT1_5end
chr5 180237490 180237518 CAGE_peak_9_at_MGAT1_5end
chr5 180242534 180242560 CAGE_peak_7_at_MGAT1_5end
chr5 180242576 180242585 CAGE_peak_12_at_MGAT1_5end
chr5 180242601 180242624 CAGE_peak_6_at_MGAT1_5end
chr5 180242646 180242657 CAGE_peak_15_at_MGAT1_5end
chr5 180242849 180242853 CAGE_peak_35_at_MGAT1_5end

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