PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000581184	[[29765031, 29765139], [29771784, 29771803], [29772608, 29772653], [29772736, 29772780], [29775369, 29775448], [29782855, 29782973], [29784144, 29784214]]	[[29772622, 29772653], [29772736, 29772780], [29775369, 29775448], [29782855, 29782973], [29784144, 29784214]]
ENST00000269202	[[29769986, 29770096], [29771784, 29771803], [29772608, 29772653], [29772736, 29772780], [29775369, 29775448], [29782855, 29782973], [29784144, 29784323], [29787214, 29787433], [29788081, 29788234], [29790463, 29790679], [29793078, 29793522], [29795044, 29795224], [29796953, 29797080], [29797723, 29797928], [29800193, 29800367]]	[[29770033, 29770096], [29771784, 29771803], [29772608, 29772653], [29772736, 29772780], [29775369, 29775448], [29782855, 29782973], [29784144, 29784323], [29787214, 29787433], [29788081, 29788234], [29790463, 29790679], [29793078, 29793522], [29795044, 29795224], [29796953, 29797080], [29797723, 29797928], [29800193, 29800208]]
ENST00000581447	[[29769987, 29770096], [29771784, 29771803], [29772608, 29772653], [29772736, 29772780], [29775369, 29775448], [29782855, 29782973], [29784144, 29784323], [29787214, 29787433], [29788081, 29788234], [29790463, 29790679], [29793078, 29793522], [29795044, 29795224], [29796953, 29797080], [29797723, 29797928], [29800196, 29800367]]	[[29770033, 29770096], [29771784, 29771803], [29772608, 29772653], [29772736, 29772780], [29775369, 29775448], [29782855, 29782973], [29784144, 29784323], [29787214, 29787433], [29788081, 29788234], [29790463, 29790679], [29793078, 29793522], [29795044, 29795224], [29796953, 29797080], [29797723, 29797928], [29800196, 29800208]]
ENST00000579919	[[29770001, 29770096], [29771784, 29771803], [29772608, 29772653], [29772736, 29772780], [29775369, 29775448], [29782855, 29783136]]	None
NM_001308171	[[29769986, 29770096], [29771784, 29771803], [29772608, 29772653], [29772736, 29772780], [29775369, 29775448], [29782855, 29782973], [29784144, 29784323], [29787214, 29787433], [29788081, 29788234], [29790463, 29790679], [29793078, 29793522], [29795044, 29795224], [29796953, 29797080], [29797723, 29797928], [29800196, 29800367]]	[[29770033, 29770096], [29771784, 29771803], [29772608, 29772653], [29772736, 29772780], [29775369, 29775448], [29782855, 29782973], [29784144, 29784323], [29787214, 29787433], [29788081, 29788234], [29790463, 29790679], [29793078, 29793522], [29795044, 29795224], [29796953, 29797080], [29797723, 29797928], [29800196, 29800208]]
NM_005925	[[29769986, 29770096], [29771784, 29771803], [29772608, 29772653], [29772736, 29772780], [29775369, 29775448], [29782855, 29782973], [29784144, 29784323], [29787214, 29787433], [29788081, 29788234], [29790463, 29790679], [29793078, 29793522], [29795044, 29795224], [29796953, 29797080], [29797723, 29797928], [29800193, 29800367]]	[[29770033, 29770096], [29771784, 29771803], [29772608, 29772653], [29772736, 29772780], [29775369, 29775448], [29782855, 29782973], [29784144, 29784323], [29787214, 29787433], [29788081, 29788234], [29790463, 29790679], [29793078, 29793522], [29795044, 29795224], [29796953, 29797080], [29797723, 29797928], [29800193, 29800208]]

Promoter

Chrom	Start	End	Description
chr18	29769978	29769989	CAGE_peak_2_at_MEP1B_5end
chr18	29769995	29770009	CAGE_peak_1_at_MEP1B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr18	GH18I032189	32189990	32190049	0.68	[{'connected_gene': 'MEP1B', 'score': 550.77}, {'connected_gene': 'CLUHP6', 'score': 0.44}, {'connected_gene': 'GAREM1', 'score': 0.06}]
chr18	GH18I032206	32206967	32210495	0.69	[{'connected_gene': 'TRAPPC8', 'score': 5.82}, {'connected_gene': 'GC18M032197', 'score': 0.44}, {'connected_gene': 'PIR59136', 'score': 0.44}, {'connected_gene': 'MEP1B', 'score': 0.34}, {'connected_gene': 'GAREM1', 'score': 0.07}]
chr18	GH18I032213	32213233	32215103	0.8	[{'connected_gene': 'PIR59136', 'score': 550.77}, {'connected_gene': 'MEP1B', 'score': 11.99}, {'connected_gene': 'GC18M032197', 'score': 0.37}, {'connected_gene': 'GAREM1', 'score': 0.07}]
chr18	GH18I032201	32201809	32202509	0.54	[{'connected_gene': 'GC18M032197', 'score': 0.77}, {'connected_gene': 'PIR59136', 'score': 0.39}, {'connected_gene': 'MEP1B', 'score': 0.37}, {'connected_gene': 'GAREM1', 'score': 0.06}]
chr18	GH18I032204	32204804	32205870	0.2	[{'connected_gene': 'GC18M032197', 'score': 0.44}, {'connected_gene': 'PIR59136', 'score': 0.44}, {'connected_gene': 'MEP1B', 'score': 0.34}, {'connected_gene': 'GAREM1', 'score': 0.06}]