PsyMuKB

PPI network (data source: BioGrid)

A gene is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the mean normalized expression(base 2 log of (TPM+1)) +1 in all brain tissue from GTEx v7 or BrainSpan data.

A protein is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the normalized expression (base 10 log of iBAQ intensity) ≥0.5 in at least one brain tissue from ProteomicsDB data. Otherwise, a gene or protein is determined as either with below-cutoff expressions or no available data.

	The queried gene/protein
	The interacting partner is expressed at mRNA-level
	The interacting partner is expressed at protein-level
	The interacting partner is expressed at both mRNA and protein level
	The interacting partner is with either below-cutoff expressions or no expression data at both mRNA and protein level
	The interacting partner is hit by coding DNMs
	Physical interaction between queried gene/protein and its partner
	Physical interaction between two interacting partners

Symbol A	GeneA coding DNM count	Symbol B	GeneB coding DNM count	Interaction detection method	Publication	Evidence
FBXW11	2	WIZ	2	affinity chromatography technology	Low TY (2014)	1
PSPH	0	VPS72	2	genetic interference	Horlbeck MA (2018)	1
MYC	2	RUVBL1	2	pull down, biochemical, affinity chromatography technology, affinity chromatography technology	Fuchs M (2001), Park J (2002), Park J (2002), Koch HB (2007)	4
WDR5	2	KAT2A	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Wang YL (2008), Huttlin EL (2015), Wang YL (2008), Huttlin EL (2017)	4
VPS50	3	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
HMG20A	0	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
GIT2	2	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
FUS	0	SSBP1	0	affinity chromatography technology	Wang T (2014)	1
RCOR1	0	TFPT	0	affinity chromatography technology	Boldt K (2016)	1
TRIM25	5	PPP2R1B	4	affinity chromatography technology	Choudhury NR (2017)	1
GIT2	2	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
MORF4L1	1	MORF4L2	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Sy SM (2009), Huttlin EL (2015), Huttlin EL (2017)	3
EP300	36	SMAD3	1	affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, two hybrid, affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Qiu P (2006), Furumatsu T (2005), Itoh S (2000), Akiyoshi S (1999), Abecassis L (2004), Kaimori A (2010), Janknecht R (1998), Janknecht R (1998), Nishihara A (1999), Nishihara A (1999), Furumatsu T (2005), Ghosh AK (2004), Shen X (1998), Shen X (1998), Ghosh AK (2001), Postigo AA (2003), Postigo AA (2003), Yang WS (2005), Lim JY (2012), Lim JY (2012), Jinnin M (2007), Wang G (2005)	22
VPS53	4	CCDC93	2	affinity chromatography technology	Boldt K (2016)	1
MORF4L2	0	ING3	3	affinity chromatography technology	Huttlin EL (2017)	1
HDAC2	1	MYCN	2	affinity chromatography technology	Marshall GM (2010)	1
PHLDB3	1	TFPT	0	affinity chromatography technology	Boldt K (2016)	1
HAUS6	5	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
ING3	3	EP400	19	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Cheng J (2017)	2
YAF2	1	23429	0	affinity chromatography technology	Huttlin EL (2017)	1
RNF2	1	WIZ	2	affinity chromatography technology	Cao Q (2014)	1
MRGBP	0	TUBA1A	13	affinity chromatography technology	Hayakawa T (2007)	1
JUN	0	SMAD4	9	affinity chromatography technology	Li X (2015)	1
CBX1	0	HDAC2	1	affinity chromatography technology	Hauri S (2016)	1
RNF2	1	HDAC2	1	affinity chromatography technology	Cao Q (2014)	1
TUFT1	1	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
MYC	2	XPO1	8	affinity chromatography technology, affinity chromatography technology	Koch HB (2007), Kirli K (2015)	2
THAP11	1	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
OIP5	1	NUF2	1	affinity chromatography technology	Boldt K (2016)	1
ASF1A	0	TFAP2A	1	imaging technique	Pchelintsev NA (2013)	1
RABGAP1L	4	NCKAP5L	4	affinity chromatography technology	Boldt K (2016)	1
RPL34	2	RPL35	1	biochemical	Wan C (2015)	1
FOXR1	3	L3MBTL2	1	affinity chromatography technology	Li X (2015)	1
MORF4L1	1	SIN3A	13	affinity chromatography technology	Doyon Y (2004)	1
ASF1A	0	EP300	36	imaging technique	Pchelintsev NA (2013)	1
MAX	0	NUF2	1	affinity chromatography technology	Boldt K (2016)	1
FOXK2	9	HIRA	5	affinity chromatography technology	Li X (2015)	1
NUF2	1	TFPT	0	affinity chromatography technology	Boldt K (2016)	1
TRIM25	5	METAP2	3	affinity chromatography technology	Choudhury NR (2017)	1
OIP5	1	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
TRIM25	5	MAPK14	0	affinity chromatography technology	Choudhury NR (2017)	1
CCHCR1	2	THAP11	1	affinity chromatography technology	Boldt K (2016)	1
MAX	0	PSPH	0	genetic interference	Horlbeck MA (2018)	1
TUFT1	1	CCDC93	2	affinity chromatography technology	Boldt K (2016)	1
PSMD9	0	YY1	7	pull down	Wan M (2012)	1
EPC1	2	PPP2CA	7	affinity chromatography technology	Cheng J (2017)	1
VPS53	4	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
TEAD1	2	MAX	0	pull down, affinity chromatography technology	Gupta MP (1997), Gupta MP (1997)	2
H2AFY	1	MECP2	36	affinity chromatography technology	Sarma K (2014)	1
MRGBP	0	BRD8	3	two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yamaguchi K (2010), Yamaguchi K (2010), Yamaguchi K (2010), Cai Y (2003), Hayakawa T (2007), Huttlin EL (2017)	6
CCHCR1	2	NUF2	1	affinity chromatography technology	Boldt K (2016)	1
MAX	0	FUS	0	pull down	Miyamoto-Sato E (2010)	1
TRIM25	5	RPL35	1	affinity chromatography technology	Choudhury NR (2017)	1
TRIM25	5	RABGEF1	1	affinity chromatography technology	Choudhury NR (2017)	1
CSNK2A1	15	RING1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	So J (2015), Hauri S (2016), Hauri S (2016)	3
CCHCR1	2	VPS53	4	affinity chromatography technology	Boldt K (2016)	1
CCDC93	2	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
23429	0	TFDP1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	4
PIM1	2	HSP90AA1	7	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Mizuno K (2001), Mizuno K (2001), Mizuno K (2001), Shay KP (2005), Shay KP (2005)	5
EPC1	2	E2F6	2	affinity chromatography technology, affinity chromatography technology	Attwooll C (2005), Attwooll C (2005)	2
CSTF2	2	MAX	0	biochemical	Havugimana PC (2012)	1
TRRAP	31	EPC1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Jacquet K (2016), Cheng J (2017)	3
MAX	0	MED9	1	genetic interference	Horlbeck MA (2018)	1
HSP90AA1	7	SKP1	0	pull down	Zhang M (2008)	1
H2AFY	1	CBX1	0	affinity chromatography technology	Sarma K (2014)	1
MORF4L2	0	KAT5	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Jacquet K (2016), Huttlin EL (2017)	4
RCOR1	0	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
PHLDB3	1	NUF2	1	affinity chromatography technology	Boldt K (2016)	1
MAX	0	RUVBL2	4	affinity chromatography technology	Cheng J (2017)	1
NUF2	1	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
CSNK2A1	15	MAX	0	enzymatic study	Wenzel A (1991)	1
EP400	19	HDAC2	1	biochemical	Wan C (2015)	1
TRIM25	5	H2AFY	1	affinity chromatography technology	Choudhury NR (2017)	1
MAX	0	VPS72	2	affinity chromatography technology, affinity chromatography technology	Cheng J (2017), Cheng J (2017)	2
MYCL	0	KAT5	1	affinity chromatography technology	Huttlin EL (2017)	1
KDM1A	2	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
MORF4L1	1	RUVBL1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Doyon Y (2004), Huttlin EL (2017)	4
RABGAP1L	4	HAUS6	5	affinity chromatography technology	Boldt K (2016)	1
RNF2	1	RUVBL2	4	affinity chromatography technology	Cao Q (2014)	1
EP300	36	SMAD4	9	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, unspecified method, affinity chromatography technology	Kim RH (2000), Luciakova K (2008), Janknecht R (1998), Chung CL (2011), Shen X (1998), Dornan D (2003), Yang Y (2015)	7
FBXW11	2	MXI1	2	affinity chromatography technology	Low TY (2014)	1
THAP11	1	HAUS6	5	affinity chromatography technology	Boldt K (2016)	1
HIF1A	1	FBXW7	2	affinity chromatography technology	Cassavaugh JM (2011)	1
FOXR2	0	KAT5	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MYCL	0	EP400	19	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Cheng J (2017)	2
EP300	36	MORF4L1	1	pull down	Karmakar S (2010)	1
WDR5	2	MYCN	2	pull down, affinity chromatography technology, affinity chromatography technology	Sun Y (2015), Sun Y (2015), Sun Y (2015)	3
MYCL	0	BRD8	3	affinity chromatography technology	Huttlin EL (2017)	1
FOXR1	3	ACTL6A	4	affinity chromatography technology	Li X (2015)	1
CCHCR1	2	DZIP3	6	affinity chromatography technology	Boldt K (2016)	1
HAUS6	5	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
TRRAP	31	BRD8	3	affinity chromatography technology	Hein MY (2015)	1
DZIP3	6	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
ARNTL	2	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
TRIM25	5	MSH2	4	affinity chromatography technology	Choudhury NR (2017)	1
MBTD1	1	VPS72	2	affinity chromatography technology	Jacquet K (2016)	1
HNRNPU	12	MYC	2	affinity chromatography technology, affinity chromatography technology	Matsuoka Y (2009), Matsuoka Y (2009)	2
RNF2	1	CSNK2A1	15	affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Cao Q (2014), Gao Z (2014), Hauri S (2016), Hauri S (2016)	5
UBN1	3	EP300	36	imaging technique	Pchelintsev NA (2013)	1
CCDC93	2	GOLGA5	5	affinity chromatography technology	Boldt K (2016)	1
DYNC1H1	41	HSPA1A	0	affinity chromatography technology	Hein MY (2015)	1
MAX	0	PPP2CB	1	affinity chromatography technology	Cheng J (2017)	1
YEATS4	0	MORF4L2	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
ING3	3	MORF4L1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Doyon Y (2006), Doyon Y (2004), Huttlin EL (2015), Huttlin EL (2017)	5
SIN3A	13	MNT	2	two hybrid, pull down	Meroni G (1997), Meroni G (1997)	2
GOLGA5	5	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
ASF1A	0	E2F6	2	imaging technique	Pchelintsev NA (2013)	1
TRIM25	5	MYC	2	affinity chromatography technology	Choudhury NR (2017)	1
MAX	0	23429	0	affinity chromatography technology, affinity chromatography technology	Cheng J (2017), Hauri S (2016)	2
CBX1	0	SPRR1B	0	affinity chromatography technology	Hauri S (2016)	1
HMG20A	0	CCHCR1	2	affinity chromatography technology	Boldt K (2016)	1
MRGBP	0	MEAF6	0	affinity chromatography technology, affinity chromatography technology	Cai Y (2003), Huttlin EL (2017)	2
RCOR1	0	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
PHLDB3	1	THAP11	1	affinity chromatography technology	Boldt K (2016)	1
PPP2R1A	8	SNIP1	0	genetic interference	Horlbeck MA (2018)	1
CCDC93	2	NUF2	1	affinity chromatography technology	Boldt K (2016)	1
MAX	0	PLEKHA5	2	two hybrid	Bandyopadhyay S (2010)	1
PHF21A	4	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
FOXK2	9	DMAP1	2	affinity chromatography technology	Li X (2015)	1
CNOT1	10	MAX	0	genetic interference	Horlbeck MA (2018)	1
MRGBP	0	EPC2	1	affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Huttlin EL (2017)	2
RPL35	1	XPO1	8	genetic interference	Horlbeck MA (2018)	1
THAP11	1	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
GOLGA5	5	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
USF1	0	MAX	0	affinity chromatography technology	Li X (2011)	1
PCGF6	0	MGA	9	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	4
THAP11	1	CCDC93	2	affinity chromatography technology	Boldt K (2016)	1
RCOR1	0	DZIP3	6	affinity chromatography technology	Boldt K (2016)	1
RCOR1	0	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
YEATS4	0	EP400	19	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Wan C (2015), Hein MY (2015), Huttlin EL (2017), Cheng J (2017)	5
E2F6	2	WDR5	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	4
CBX3	1	YAF2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ogawa H (2002), Gao Z (2012), Hauri S (2016), Hauri S (2016)	4
RCOR1	0	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
KDM5C	9	XPO1	8	affinity chromatography technology	Hein MY (2015)	1
CLOCK	0	PPP1CB	9	two hybrid, affinity chromatography technology	Wallach T (2013), Wallach T (2013)	2
THAP11	1	SIN3A	13	pull down	Dejosez M (2008)	1
TRIM25	5	HSP90AA1	7	affinity chromatography technology	Choudhury NR (2017)	1
SMAD3	1	SAP130	2	two hybrid	Colland F (2004)	1
JUN	0	TAF1	9	pull down	Lively TN (2001)	1
VPS53	4	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
CSNK2A1	15	TAF1	9	affinity chromatography technology, affinity chromatography technology	Allende-Vega N (2008), Allende-Vega N (2008)	2
USP37	1	TUBA1A	13	bioid	Yeh C (2015)	1
SMAD4	9	YY1	7	imaging technique, pull down, affinity chromatography technology	Kurisaki K (2003), Kurisaki K (2003), Kurisaki K (2003)	3
MXD1	2	SAP130	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
FOXR1	3	DMAP1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Li X (2015), Huttlin EL (2017)	3
PCGF6	0	ARG1	0	affinity chromatography technology	Hauri S (2016)	1
RCOR1	0	GRIPAP1	0	affinity chromatography technology	Boldt K (2016)	1
TUFT1	1	TFPT	0	affinity chromatography technology	Boldt K (2016)	1
FOXR1	3	MORF4L1	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MXD3	1	MAX	0	two hybrid, two hybrid, two hybrid, pull down, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Billin AN (1999), Gupta K (1998), Meroni G (1997), FitzGerald MJ (1999), Meroni G (2000), Huttlin EL (2017), Cheng J (2017), Hauri S (2016)	8
FOXK1	5	HDAC2	1	affinity chromatography technology	Li X (2015)	1
RABGAP1L	4	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
MYC	2	KAT2A	1	affinity chromatography technology, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, pull down, fluorescent resonance energy transfe	McMahon SB (2000), Faiola F (2005), Liu X (2008), Conacci-Sorrell M (2010), Liu X (2003), Liu X (2003), Ivanov AA (2017)	7
EP300	36	CLOCK	0	pull down	Curtis AM (2004)	1
CBX1	0	L3MBTL2	1	affinity chromatography technology	Hauri S (2016)	1
MTOR	14	RUVBL2	4	affinity chromatography technology	Agrawal P (2012)	1
KAT5	1	MEAF6	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2004), Huttlin EL (2015), Jacquet K (2016), Huttlin EL (2017)	4
CBX3	1	TFDP1	3	affinity chromatography technology, affinity chromatography technology	Hauri S (2016), Hauri S (2016)	2
UNC45A	1	WDR5	2	biochemical	Havugimana PC (2012)	1
TUFT1	1	RABGAP1L	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017), Boldt K (2016)	3
JUN	0	TBP	0	pull down, pull down	Franklin CC (1995), Franklin CC (1995)	2
HMG20A	0	DZIP3	6	affinity chromatography technology	Boldt K (2016)	1
PHLDB3	1	DZIP3	6	affinity chromatography technology	Boldt K (2016)	1
BFSP2	1	MAX	0	affinity chromatography technology	Huttlin EL (2017)	1
E2F6	2	KMT2D	30	affinity chromatography technology	Takeda S (2006)	1
RUVBL1	2	ACTL6A	4	affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Park J (2002), Park J (2002), Cai Y (2007), Havugimana PC (2012), Huttlin EL (2017), Cloutier P (2017)	6
FOXR2	0	MBTD1	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
GRIPAP1	0	GOLGA5	5	affinity chromatography technology	Boldt K (2016)	1
23429	0	WDR5	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	4
NUF2	1	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
CCHCR1	2	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
MAX	0	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
MAX	0	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
EP400	19	EPC2	1	affinity chromatography technology	Cheng J (2017)	1
MYC	2	TRRAP	31	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, genetic interference, pull down	Liu X (2003), McMahon SB (2000), McMahon SB (1998), Park J (2002), Bres V (2009), Cowling VH (2006), Frank SR (2001), Kim J (2010), Kim J (2010), Koch HB (2007), Toyoshima M (2012), Liu X (2003)	12
RABGAP1L	4	PHLDB3	1	affinity chromatography technology	Boldt K (2016)	1
RUVBL2	4	HNRNPU	12	affinity chromatography technology	Jeronimo C (2007)	1
ACTL6A	4	LEO1	3	genetic interference	Horlbeck MA (2018)	1
JUN	0	MYC	2	affinity chromatography technology	Levy S (2010)	1
FBXW7	2	MYC	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, enzymatic study	Thompson BJ (2007), Welcker M (2004), Welcker M (2004), Yada M (2004), Yada M (2004), Yada M (2004), Koch HB (2007), Kim BY (2010), Cho HJ (2010), Popov N (2007), Fujii M (2006), Yumimoto K (2012), Diefenbacher ME (2015), Kourtis N (2015), Kourtis N (2015), Li J (2017), Wang Y (2017), Reiterer V (2017), Chandra S (2013), Chandra S (2013), Chandra S (2013), Chandra S (2013)	22
FOXR1	3	EP400	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Li X (2015), Huttlin EL (2017)	3
MAX	0	PPP2R1A	8	affinity chromatography technology	Cheng J (2017)	1
PPP1CA	3	PPP1CB	9	biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Havugimana PC (2012), Huttlin EL (2015), Wan C (2015), Hein MY (2015), Huttlin EL (2017), Boldt K (2016)	6
HMG20A	0	HAUS6	5	affinity chromatography technology	Boldt K (2016)	1
MORF4L2	0	RUVBL2	4	affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010)	2
MYC	2	TBP	0	pull down	McEwan IJ (1996)	1
MBTD1	1	ACTL6A	4	affinity chromatography technology	Jacquet K (2016)	1
JUN	0	CSNK2A1	15	pull down, far western blotting, enzymatic study	Yamaguchi Y (1998), Yamaguchi Y (1998), Uhle S (2003)	3
MAX	0	TRRAP	31	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	McMahon SB (2000), McMahon SB (1998), Kim J (2010), Kim J (2010), Cheng J (2017), Cheng J (2017)	6
EPAS1	6	CNOT1	10	affinity chromatography technology	Steunou AL (2012)	1
MAX	0	RABGAP1L	4	affinity chromatography technology	Boldt K (2016)	1
SMARCA1	2	TFPT	0	biochemical	Havugimana PC (2012)	1
CCDC93	2	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
KDM1A	2	SMAD4	9	affinity chromatography technology	Rivero S (2015)	1
RCOR1	0	MECP2	36	affinity chromatography technology	Lunyak VV (2002)	1
CBX1	0	YAF2	1	affinity chromatography technology, affinity chromatography technology	Hauri S (2016), Hauri S (2016)	2
MXD3	1	MNT	2	affinity chromatography technology	Huttlin EL (2017)	1
PHF21A	4	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
GIT2	2	TFPT	0	affinity chromatography technology	Boldt K (2016)	1
MAX	0	TUFT1	1	affinity chromatography technology	Boldt K (2016)	1
ING3	3	MRGBP	0	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Huttlin EL (2017)	2
CBX1	0	E2F6	2	affinity chromatography technology, affinity chromatography technology	Hauri S (2016), Hauri S (2016)	2
MAX	0	SPRR1B	0	affinity chromatography technology	Hauri S (2016)	1
MEAF6	0	RUVBL2	4	affinity chromatography technology	Huttlin EL (2017)	1
RPRD1A	2	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
TUFT1	1	VPS53	4	affinity chromatography technology	Boldt K (2016)	1
XPO1	8	NCKAP5L	4	affinity chromatography technology	Kirli K (2015)	1
CCHCR1	2	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
RPL35	1	HNRNPU	12	biochemical	Kristensen AR (2012)	1
NCKAP5L	4	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
23429	0	RNF2	1	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gearhart MD (2006), Gao Z (2012), Gao Z (2012), Gao Z (2012), Gao Z (2012), Cao Q (2014), Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	11
THAP11	1	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
MAX	0	EPC2	1	affinity chromatography technology	Cheng J (2017)	1
KDM1A	2	MBTPS2	1	genetic interference	Horlbeck MA (2018)	1
MAX	0	PHLDB3	1	affinity chromatography technology	Boldt K (2016)	1
UBN1	3	HIRA	5	affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ray-Gallet D (2011), Tang Y (2012), Tang Y (2012), Tang Y (2012), Tang Y (2012), Tang Y (2012), Lee JS (2016), Lee JS (2016), Lee JS (2016), Pchelintsev NA (2013), Pchelintsev NA (2013)	11
RCOR1	0	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
YEATS4	0	EPC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017)	3
FBXW11	2	FUS	0	affinity chromatography technology	Low TY (2014)	1
CBX1	0	WDR5	2	affinity chromatography technology	Hauri S (2016)	1
HNRNPU	12	THAP11	1	affinity chromatography technology	Hein MY (2015)	1
MYC	2	MYCN	2	affinity chromatography technology	Li X (2015)	1
USP37	1	TAF1	9	bioid	Yeh C (2015)	1
MORF4L2	0	VPS72	2	affinity chromatography technology	Huttlin EL (2017)	1
KDM1A	2	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
RING1	2	23429	0	two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Rual JF (2005), Garcia E (1999), Garcia E (1999), Garcia E (1999), Garcia E (1999), Gearhart MD (2006), Gao Z (2012), Gao Z (2012), Rolland T (2014), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	13
MYC	2	EP300	36	affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, imaging technique, enzymatic study, affinity chromatography technology, affinity chromatography technology	Faiola F (2005), Faiola F (2005), Faiola F (2005), Faiola F (2005), Faiola F (2005), Zhang K (2005), Covic M (2005), Fujii M (2006)	8
CLOCK	0	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
RUVBL1	2	TUBA1A	13	affinity chromatography technology	Izumi N (2010)	1
EP300	36	TWIST1	0	affinity chromatography technology, pull down, pull down, genetic interference	Hamamori Y (1999), Hamamori Y (1999), Hamamori Y (1999), Hamamori Y (1999)	4
SKP1	0	RING1	2	affinity chromatography technology, affinity chromatography technology	Hauri S (2016), Hauri S (2016)	2
CCDC93	2	JUN	0	affinity chromatography technology	Boldt K (2016)	1
YAF2	1	YY1	7	two hybrid	Kalenik JL (1997)	1
METAP2	3	MTOR	14	affinity chromatography technology	Peterson TR (2009)	1
HNRNPH2	2	EPC2	1	affinity chromatography technology	Hein MY (2015)	1
MRGBP	0	RUVBL2	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cai Y (2003), Hayakawa T (2007), Huttlin EL (2017)	3
HSP90AA1	7	EPAS1	6	pull down	Katschinski DM (2004)	1
HSP90AA1	7	HIF1A	1	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hogenesch JB (1997), Qian DZ (2006), Kong X (2006), Kubo T (2004), Zhou J (2004), Fu B (2007), Choi YK (2010), Choi YK (2010), Lee JM (2011), Liu YV (2007), Liu YV (2007), Katschinski DM (2004), Katschinski DM (2004), Katschinski DM (2004), Trisciuoglio D (2010), Trisciuoglio D (2010), Ueda K (2008), Sun H (2013), Kawanami D (2009), Prince TL (2015), Prince TL (2015), Isaacs JS (2004), Lee SH (2015)	23
PCGF6	0	TFDP1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	4
RPRD1A	2	KDM1A	2	two hybrid, affinity chromatography technology	Weimann M (2013), Boldt K (2016)	2
CSNK2A1	15	COPS5	0	affinity chromatography technology	Bhansali M (2014)	1
MAX	0	KDM1A	2	affinity chromatography technology	Boldt K (2016)	1
THAP11	1	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
GOLGA5	5	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
MAX	0	GRIPAP1	0	affinity chromatography technology	Boldt K (2016)	1
L3MBTL2	1	E2F6	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Trojer P (2011), Trojer P (2011), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	6
LEO1	3	PSMD6	0	genetic interference	Horlbeck MA (2018)	1
MAX	0	JUN	0	affinity chromatography technology	Boldt K (2016)	1
RCOR1	0	CCDC93	2	affinity chromatography technology	Boldt K (2016)	1
PHLDB3	1	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
MNT	2	MAX	0	pull down, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Meroni G (1997), Meroni G (1997), Matsuoka Y (2008), Kim J (2010), Li X (2015), Cheng J (2017), Hauri S (2016)	7
FOXR1	3	ING3	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Li X (2015), Huttlin EL (2017)	3
TRIM25	5	PPP2CA	7	affinity chromatography technology	Choudhury NR (2017)	1
YEATS4	0	TRRAP	31	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Hein MY (2015), Hein MY (2015), Huttlin EL (2017)	4
KDM5C	9	RNF2	1	affinity chromatography technology	Tahiliani M (2007)	1
MYC	2	SAP130	2	pull down	Liu X (2003)	1
MRGBP	0	ACTL6A	4	affinity chromatography technology, affinity chromatography technology	Cai Y (2003), Hayakawa T (2007)	2
HDAC2	1	ACTL6A	4	affinity chromatography technology	Joshi P (2013)	1
HAUS6	5	TFPT	0	affinity chromatography technology	Boldt K (2016)	1
TRIM25	5	EP300	36	affinity chromatography technology, affinity chromatography technology	Choudhury NR (2017), Choudhury NR (2017)	2
FOXR2	0	MAX	0	affinity chromatography technology, affinity chromatography technology	Li X (2015), Huttlin EL (2017)	2
SIN3A	13	TAF1	9	affinity chromatography technology	Nakamura T (2002)	1
MTOR	14	RUVBL1	2	affinity chromatography technology	Agrawal P (2012)	1
GIT2	2	GOLGA5	5	affinity chromatography technology	Boldt K (2016)	1
RING1	2	YY1	7	affinity chromatography technology	Lorente M (2006)	1
NCKAP5L	4	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
HSP90AA1	7	MYC	2	affinity chromatography technology	Carystinos GD (2003)	1
FOXR1	3	KAT5	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Li X (2015), Huttlin EL (2017)	3
FOXR1	3	MORF4L2	0	affinity chromatography technology	Li X (2015)	1
YY1	7	MYC	2	two hybrid, pull down	Shrivastava A (1993), Shrivastava A (1993)	2
EPC1	2	RUVBL1	2	affinity chromatography technology, affinity chromatography technology	Jacquet K (2016), Huttlin EL (2017)	2
HAUS6	5	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
CCDC93	2	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
MBTD1	1	DMAP1	2	affinity chromatography technology, affinity chromatography technology	Jacquet K (2016), Jacquet K (2016)	2
GIT2	2	GRIPAP1	0	affinity chromatography technology	Boldt K (2016)	1
FBXW11	2	MAX	0	affinity chromatography technology, affinity chromatography technology	Kim TY (2014), Hauri S (2016)	2
DZIP3	6	HAUS6	5	affinity chromatography technology	Boldt K (2016)	1
PHLDB3	1	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
OIP5	1	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
ARNTL	2	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
HAUS6	5	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
RNF2	1	YAF2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Gao Z (2012), Cao Q (2014), Hein MY (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	7
MAX	0	SMARCA5	4	affinity chromatography technology	Li X (2015)	1
E2F6	2	SPRR1B	0	affinity chromatography technology	Hauri S (2016)	1
EP400	19	BRD8	3	affinity chromatography technology	Cheng J (2017)	1
RUVBL1	2	EPC2	1	affinity chromatography technology	Huttlin EL (2017)	1
MAX	0	TUBA1A	13	pull down	Miyamoto-Sato E (2010)	1
FOXK2	9	TBP	0	affinity chromatography technology	Li X (2015)	1
PIM1	2	MYC	2	affinity chromatography technology, affinity chromatography technology	Zippo A (2007), Zippo A (2007)	2
TRIM25	5	PSPH	0	affinity chromatography technology	Choudhury NR (2017)	1
DZIP3	6	TFPT	0	affinity chromatography technology	Boldt K (2016)	1
CSNK2A1	15	WDR5	2	affinity chromatography technology, affinity chromatography technology	Hauri S (2016), Hauri S (2016)	2
XPO1	8	RUVBL2	4	affinity chromatography technology	Kirli K (2015)	1
TFPT	0	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
GOLGA5	5	TFPT	0	affinity chromatography technology	Boldt K (2016)	1
MORF4L1	1	EP400	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2010), Sy SM (2009), Huttlin EL (2015), Huttlin EL (2017), Cheng J (2017)	5
KAT5	1	EPC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kim J (2010), Huttlin EL (2015), Jacquet K (2016), Huttlin EL (2017)	4
MAX	0	FOXK1	5	affinity chromatography technology	Li X (2015)	1
GIT2	2	CCHCR1	2	affinity chromatography technology	Boldt K (2016)	1
MAX	0	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
ASF1A	0	PPP1CB	9	affinity chromatography technology	Hein MY (2015)	1
MXD1	2	PCGF6	0	affinity chromatography technology	Cheng J (2017)	1
HSP90AA1	7	XPO1	8	affinity chromatography technology	Falsone SF (2005)	1
FOXR1	3	SMARCA5	4	affinity chromatography technology	Li X (2015)	1
POU5F1	0	RPRD1A	2	affinity chromatography technology	Oliviero G (2015)	1
7515	0	XPO1	8	affinity chromatography technology, affinity chromatography technology	Chase GP (2011), Chase GP (2011)	2
RABGEF1	1	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
VPS53	4	GOLGA5	5	affinity chromatography technology	Boldt K (2016)	1
TFPT	0	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
FBXW11	2	DYNC1H1	41	affinity chromatography technology	Low TY (2014)	1
MAX	0	MECP2	36	affinity chromatography technology	Li X (2015)	1
MEAF6	0	VPS72	2	affinity chromatography technology	Huttlin EL (2017)	1
MEAF6	0	RUVBL1	2	affinity chromatography technology	Huttlin EL (2017)	1
FBXW7	2	RCOR1	0	affinity chromatography technology	Kourtis N (2015)	1
TFPT	0	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
MYC	2	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Koch HB (2007), Hwang IY (2012)	2
DZIP3	6	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
THAP11	1	TFPT	0	affinity chromatography technology	Boldt K (2016)	1
RCOR1	0	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
THAP11	1	GRIPAP1	0	affinity chromatography technology	Boldt K (2016)	1
BANP	1	EP300	36	affinity chromatography technology	Sinha S (2012)	1
RABGAP1L	4	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
MECP2	36	HIRA	5	affinity chromatography technology	Huttlin EL (2017)	1
ARNTL	2	HIF1A	1	two hybrid, pull down, two hybrid	Hogenesch JB (1998), Hogenesch JB (1998), Rolland T (2014)	3
XPO1	8	RING1	2	affinity chromatography technology	Kirli K (2015)	1
PHF21A	4	GRIPAP1	0	affinity chromatography technology	Boldt K (2016)	1
GIT2	2	RABGAP1L	4	affinity chromatography technology	Boldt K (2016)	1
SMAD4	9	MAX	0	pull down	Grinberg AV (2003)	1
GRIPAP1	0	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
UBN1	3	JUN	0	imaging technique	Pchelintsev NA (2013)	1
HMG20A	0	CCDC93	2	affinity chromatography technology	Boldt K (2016)	1
RNF2	1	RUVBL1	2	affinity chromatography technology	Cao Q (2014)	1
MORF4L2	0	TRRAP	31	affinity chromatography technology, biochemical, affinity chromatography technology	Hayakawa T (2010), Wan C (2015), Huttlin EL (2017)	3
PPP2CB	1	PPP2R1A	8	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, bioid	Goudreault M (2009), Zhou J (2003), Zhou J (2003), Glatter T (2009), Glatter T (2009), Fogeron ML (2013), Huttlin EL (2015), Wan C (2015), Hein MY (2015), Hein MY (2015), St-Denis N (2016), Huttlin EL (2017), Boldt K (2016), Yadav L (2017), Yadav L (2017)	15
OIP5	1	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
CBX1	0	CBX3	1	affinity chromatography technology, affinity chromatography technology, pull down, pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Nielsen AL (2001), Nielsen AL (2001), Nielsen AL (2001), Nielsen AL (2001), Mateos-Langerak J (2007), Rosnoblet C (2011), Hauri S (2016), Hauri S (2016)	8
POU5F1	0	TUBA1A	13	affinity chromatography technology, affinity chromatography technology	Hawkins PG (2010), Oliviero G (2015)	2
NCKAP5L	4	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
MYCL	0	TRRAP	31	affinity chromatography technology	Huttlin EL (2017)	1
MYC	2	CCNT1	3	affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology	Kanazawa S (2003), Kanazawa S (2003), Bres V (2009), Eberhardy SR (2001), Gargano B (2007)	5
PPP2R1B	4	PPP2CB	1	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Zhou J (2003), Zhou J (2003), Glatter T (2009), Huttlin EL (2015), Wan C (2015), Hein MY (2015), Huttlin EL (2017)	7
LEO1	3	PPP1CC	2	affinity chromatography technology	Mak AB (2010)	1
MXD1	2	RNF2	1	affinity chromatography technology	Cheng J (2017)	1
RABGAP1L	4	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
MAX	0	PPP2CA	7	affinity chromatography technology	Cheng J (2017)	1
MRGBP	0	TRRAP	31	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cai Y (2003), Cai Y (2003), Huttlin EL (2017)	3
RCOR1	0	NUF2	1	affinity chromatography technology	Boldt K (2016)	1
KDM1A	2	DZIP3	6	affinity chromatography technology	Boldt K (2016)	1
TRIM25	5	VPS53	4	affinity chromatography technology	Choudhury NR (2017)	1
OIP5	1	RCOR1	0	affinity chromatography technology	Boldt K (2016)	1
KDM1A	2	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
MXD1	2	RING1	2	affinity chromatography technology	Cheng J (2017)	1
CSNK2A1	15	HDAC2	1	enzymatic study, affinity chromatography technology, affinity chromatography technology, enzymatic study, biochemical, enzymatic study, biochemical	Sun JM (2002), Sun JM (2007), Adenuga D (2010), Tsai SC (2002), Havugimana PC (2012), Zhang M (2011), Wan C (2015)	7
ARNTL	2	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
RUVBL2	4	ACTL6A	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jeronimo C (2007), Cai Y (2007), Cloutier P (2017), Cheng J (2017)	4
MAX	0	EP400	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Fuchs M (2001), Kim J (2010), Kim J (2010), Li X (2015), Cheng J (2017), Cheng J (2017), Cheng J (2017)	7
MORF4L1	1	MBTD1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Huttlin EL (2015), Jacquet K (2016), Jacquet K (2016), Huttlin EL (2017)	5
NUF2	1	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
PHLDB3	1	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
TUFT1	1	NUF2	1	affinity chromatography technology	Boldt K (2016)	1
MORF4L1	1	YEATS4	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017)	3
FOXK2	9	CUX1	7	affinity chromatography technology	Li X (2015)	1
CCNT1	3	TAF1	9	biochemical	Havugimana PC (2012)	1
POU5F1	0	MAX	0	affinity chromatography technology	Oliviero G (2015)	1
MYC	2	PPP1CA	3	affinity chromatography technology	Koch HB (2007)	1
KDM5C	9	CBX3	1	affinity chromatography technology	Tahiliani M (2007)	1
KDM5C	9	RING1	2	affinity chromatography technology	Tahiliani M (2007)	1
CCHCR1	2	TUFT1	1	affinity chromatography technology	Boldt K (2016)	1
MAX	0	HIF1A	1	affinity chromatography technology	Gordan JD (2007)	1
DZIP3	6	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
FUS	0	HSP90AA1	7	affinity chromatography technology	Wang T (2014)	1
MRGBP	0	MORF4L2	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, biochemical, affinity chromatography technology	Cai Y (2003), Hayakawa T (2007), Hayakawa T (2007), Hayakawa T (2007), Hayakawa T (2010), Rolland T (2014), Wan C (2015), Huttlin EL (2017)	8
FOXR2	0	MYC	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Li X (2015), Huttlin EL (2017)	3
L3MBTL2	1	PCGF6	0	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Trojer P (2011), Trojer P (2011), Gao Z (2012), Gao Z (2012), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	7
MSH2	4	SMARCA5	4	biochemical	Havugimana PC (2012)	1
MAX	0	CUX1	7	two hybrid	Bandyopadhyay S (2010)	1
YEATS4	0	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
MRGBP	0	MBTD1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Jacquet K (2016), Jacquet K (2016), Huttlin EL (2017)	4
GRIPAP1	0	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
YAF2	1	RING1	2	affinity chromatography technology, affinity chromatography technology, two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Gao Z (2012), Rolland T (2014), Yu H (2011), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	7
NCKAP5L	4	HAUS6	5	affinity chromatography technology	Boldt K (2016)	1
VPS53	4	DZIP3	6	affinity chromatography technology	Boldt K (2016)	1
KDM1A	2	GRIPAP1	0	affinity chromatography technology	Boldt K (2016)	1
CNOT1	10	LEO1	3	genetic interference	Horlbeck MA (2018)	1
CBX3	1	HDAC2	1	affinity chromatography technology	Hauri S (2016)	1
MAX	0	VPS53	4	affinity chromatography technology	Boldt K (2016)	1
ING3	3	YEATS4	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Huttlin EL (2015), Hein MY (2015), Hein MY (2015), Huttlin EL (2017)	5
SMAD3	1	JUN	0	two hybrid, affinity chromatography technology, pull down, affinity chromatography technology, pull down, pull down, affinity chromatography technology	Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Verrecchia F (2000), Liberati NT (1999), Liberati NT (2001), Lee SY (2011)	7
DMAP1	2	EP400	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kim J (2010), Kim J (2010), Cheng J (2017)	3
PPP2CA	7	PIM1	2	enzymatic study	Ma J (2007)	1
RUVBL1	2	VPS72	2	biochemical, affinity chromatography technology	Havugimana PC (2012), Huttlin EL (2017)	2
THAP11	1	DZIP3	6	affinity chromatography technology	Boldt K (2016)	1
PSMD9	0	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
PIM1	2	BANP	1	two hybrid	Rolland T (2014)	1
CEBPA	0	MAX	0	affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology	Zada AA (2006), Zada AA (2006), Zada AA (2006), Zada AA (2006), Zada AA (2006)	5
RNF2	1	YY1	7	affinity chromatography technology, affinity chromatography technology	Lorente M (2006), Cao Q (2014)	2
UBN1	3	TFAP2A	1	imaging technique	Pchelintsev NA (2013)	1
TRIM25	5	PPP1CB	9	affinity chromatography technology	Choudhury NR (2017)	1
COPS5	0	SSBP1	0	affinity chromatography technology	Bennett EJ (2010)	1
DNMT3L	2	JUN	0	pull down	Pacaud R (2014)	1
MBTD1	1	ING3	3	affinity chromatography technology, affinity chromatography technology	Jacquet K (2016), Jacquet K (2016)	2
CCDC93	2	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
LEO1	3	VPS72	2	genetic interference	Horlbeck MA (2018)	1
MBTD1	1	BRD8	3	affinity chromatography technology, affinity chromatography technology	Jacquet K (2016), Jacquet K (2016)	2
MAX	0	RECQL	1	affinity chromatography technology	Li X (2015)	1
FBXW11	2	PPP1CC	2	two hybrid	Wallach T (2013)	1
KDM1A	2	LEO1	3	genetic interference	Horlbeck MA (2018)	1
ING3	3	EPC2	1	affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Hein MY (2015)	2
PHF21A	4	NCKAP5L	4	affinity chromatography technology	Boldt K (2016)	1
RPA2	0	PPP2CA	7	affinity chromatography technology	Marechal A (2014)	1
RABGAP1L	4	VPS53	4	affinity chromatography technology	Boldt K (2016)	1
HMG20A	0	VPS53	4	affinity chromatography technology	Boldt K (2016)	1
VPS50	3	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
MORF4L2	0	HNRNPU	12	affinity chromatography technology	Hayakawa T (2007)	1
PPP2R1A	8	HSP90AA1	7	affinity chromatography technology, affinity chromatography technology	Aranda-Orgilles B (2008), Gano JJ (2010)	2
MAX	0	KAT5	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kim J (2010), Kim J (2010), Kim J (2010), Cheng J (2017)	4
ING3	3	EPC1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Doyon Y (2006), Doyon Y (2004), Hein MY (2015), Jacquet K (2016)	5
NUF2	1	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
MAX	0	PPIE	1	genetic interference	Horlbeck MA (2018)	1
GOLGA5	5	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
USP37	1	SKP1	0	affinity chromatography technology, bioid	Burrows AC (2012), Yeh C (2015)	2
PSMD9	0	PSMD6	0	biochemical	Wan C (2015)	1
THAP11	1	VPS53	4	affinity chromatography technology	Boldt K (2016)	1
PSMD9	0	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
GRIPAP1	0	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
WDR5	2	KMT2D	30	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method, x-ray crystallography, unspecified method, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology	Wysocka J (2005), Patel SR (2007), Mo R (2006), Dharmarajan V (2012), Zhang P (2012), Zhang P (2012), Kim JH (2014), Xu Z (2012), Huttlin EL (2015), Dias J (2014), Huttlin EL (2017), Alicea-Velazquez NL (2016), Hauri S (2016)	13
NDUFB2	1	SDHC	1	genetic interference	Horlbeck MA (2018)	1
TRIM25	5	ARG1	0	affinity chromatography technology	Choudhury NR (2017)	1
RUVBL1	2	SMARCA1	2	biochemical	Havugimana PC (2012)	1
EP400	19	PPP2CA	7	affinity chromatography technology	Cheng J (2017)	1
GRIPAP1	0	HAUS6	5	affinity chromatography technology	Boldt K (2016)	1
FBXW7	2	MAX	0	affinity chromatography technology	Kourtis N (2015)	1
MYCL	0	VPS72	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Cheng J (2017)	2
LEO1	3	SDHC	1	genetic interference	Horlbeck MA (2018)	1
CBX3	1	RING1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ogawa H (2002), Hauri S (2016), Hauri S (2016)	3
MECP2	36	CBX1	0	affinity chromatography technology	Gonzales ML (2012)	1
RNF2	1	E2F6	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Huttlin EL (2015), Hauri S (2016), Hauri S (2016)	4
OIP5	1	VPS53	4	affinity chromatography technology	Boldt K (2016)	1
MAX	0	SIN3A	13	affinity chromatography technology, affinity chromatography technology	Li X (2015), Cheng J (2017)	2
MAX	0	YY1	7	affinity chromatography technology, affinity chromatography technology	de Nigris F (2007), de Nigris F (2007)	2
EP300	36	TFAP2A	1	two hybrid, affinity chromatography technology, affinity chromatography technology	Braganca J (2003), Braganca J (2003), Shi D (2015)	3
HSP90AA1	7	TUBA1A	13	affinity chromatography technology, affinity chromatography technology	Hu Y (2003), Skarra DV (2011)	2
L3MBTL2	1	TFDP1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	3
JUN	0	HIF1A	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Alfranca A (2002), Yu B (2009), Yu B (2009)	3
FOXR1	3	YEATS4	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Li X (2015), Huttlin EL (2017)	3
XPO1	8	CPSF6	1	affinity chromatography technology	Kirli K (2015)	1
MAX	0	BANP	1	two hybrid	Rolland T (2014)	1
HMG20A	0	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
DMAP1	2	EPC1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kim J (2010), Doyon Y (2004), Doyon Y (2004), Jacquet K (2016), Cheng J (2017)	5
KDM1A	2	GOLGA5	5	affinity chromatography technology	Boldt K (2016)	1
DYNC1H1	41	RPA2	0	biochemical	Havugimana PC (2012)	1
COPS5	0	PPP2R1A	8	genetic interference	Horlbeck MA (2018)	1
MRGBP	0	YEATS4	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cai Y (2003), Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017)	4
TBP	0	EP300	36	affinity chromatography technology	Dallas PB (1997)	1
DMAP1	2	YEATS4	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2004), Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017)	4
MYCL	0	FOXK1	5	affinity chromatography technology	Huttlin EL (2017)	1
KDM1A	2	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
RING1	2	RNF2	1	pull down, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cao R (2005), Gearhart MD (2006), Wang H (2004), Trojer P (2011), Gao Z (2012), Gao Z (2012), Cao Q (2014), Hein MY (2015)	8
EP300	36	MAX	0	enzymatic study, affinity chromatography technology, enzymatic study, enzymatic study	Faiola F (2007), Faiola F (2005), Faiola F (2005), Zhang K (2005)	4
GOLGA5	5	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
HMG20A	0	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
TFDP1	3	RING1	2	affinity chromatography technology, affinity chromatography technology	Hauri S (2016), Hauri S (2016)	2
MXD1	2	23429	0	affinity chromatography technology	Cheng J (2017)	1
RPA2	0	RUVBL2	4	affinity chromatography technology	Marechal A (2014)	1
COPS5	0	RPL35	1	affinity chromatography technology	Bennett EJ (2010)	1
MYCL	0	EPC2	1	affinity chromatography technology	Huttlin EL (2017)	1
RCOR1	0	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
E2F6	2	ARG1	0	affinity chromatography technology	Hauri S (2016)	1
TRIM25	5	RCOR1	0	affinity chromatography technology	Choudhury NR (2017)	1
CDK12	3	MAX	0	genetic interference	Horlbeck MA (2018)	1
PCGF6	0	YAF2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Gao Z (2012), Gao Z (2012), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	6
MXD1	2	TFDP1	3	affinity chromatography technology	Cheng J (2017)	1
LEO1	3	MRPL36	3	genetic interference, genetic interference	Horlbeck MA (2018), Horlbeck MA (2018)	2
FOXK1	5	SAP130	2	affinity chromatography technology	Li X (2015)	1
MAX	0	SMARCA1	2	affinity chromatography technology	Li X (2015)	1
MAX	0	MGA	9	two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology	Bandyopadhyay S (2010), Wang J (2011), Li X (2015), Hauri S (2016)	4
THAP11	1	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
E2F6	2	HDAC2	1	affinity chromatography technology	Hauri S (2016)	1
KDM1A	2	VPS53	4	affinity chromatography technology	Boldt K (2016)	1
SIN3A	13	HSP90AA1	7	affinity chromatography technology	Farhana L (2007)	1
TRIM25	5	PCGF6	0	affinity chromatography technology	Choudhury NR (2017)	1
XPO1	8	WDR5	2	affinity chromatography technology	Kirli K (2015)	1
THAP11	1	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
TRIM25	5	23429	0	affinity chromatography technology	Choudhury NR (2017)	1
CBX3	1	ARG1	0	affinity chromatography technology	Hauri S (2016)	1
RUVBL1	2	TRRAP	31	affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Park J (2002), Havugimana PC (2012), Izumi N (2010), Wan C (2015), Hein MY (2015), Huttlin EL (2017)	6
EP400	19	PPP2CB	1	affinity chromatography technology	Cheng J (2017)	1
23429	0	L3MBTL2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	4
HSP90AA1	7	ZBTB17	2	affinity chromatography technology	Taipale M (2012)	1
EP300	36	ARNTL	2	pull down	Curtis AM (2004)	1
HMG20A	0	TUFT1	1	affinity chromatography technology	Boldt K (2016)	1
FBXW7	2	SSBP1	0	genetic interference	Bailey ML (2015)	1
FOXR2	0	RUVBL2	4	affinity chromatography technology	Huttlin EL (2017)	1
PHLDB3	1	GRIPAP1	0	affinity chromatography technology	Boldt K (2016)	1
KDM5C	9	CSNK2A1	15	affinity chromatography technology	Hein MY (2015)	1
MYC	2	BRD8	3	affinity chromatography technology	Kim J (2010)	1
MEAF6	0	L3MBTL2	1	two hybrid	Rual JF (2005)	1
DMAP1	2	TRRAP	31	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kim J (2010), Kim J (2010), Doyon Y (2004), Doyon Y (2004), Hein MY (2015)	5
MYC	2	EP400	19	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique	Fuchs M (2001), Fuchs M (2001), Kim J (2010), Kim J (2010), Agrawal P (2010), Tworkowski KA (2008), Tworkowski KA (2008), Tworkowski KA (2008)	8
PPP2R1A	8	PSMD6	0	genetic interference	Horlbeck MA (2018)	1
THAP11	1	PHF21A	4	affinity chromatography technology	Boldt K (2016)	1
MORF4L2	0	EP400	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2010), Huttlin EL (2017), Cheng J (2017)	3
MAX	0	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
KDM1A	2	SIN3A	13	affinity chromatography technology	You A (2001)	1
MAX	0	TCP10L	0	affinity chromatography technology	Huttlin EL (2017)	1
CBX3	1	SPRR1B	0	affinity chromatography technology	Hauri S (2016)	1
MAX	0	CCHCR1	2	affinity chromatography technology	Boldt K (2016)	1
RPA2	0	LIG3	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Marechal A (2014), Huttlin EL (2015), Huttlin EL (2017)	3
CBX1	0	TFDP1	3	affinity chromatography technology	Hauri S (2016)	1
MAX	0	MRPL36	3	genetic interference	Horlbeck MA (2018)	1
YEATS4	0	BRD8	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017)	3
HDAC2	1	HMG20A	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Joshi P (2013), Hein MY (2015), Huttlin EL (2017), Rivero S (2015)	5
ASF1A	0	MAX	0	imaging technique	Pchelintsev NA (2013)	1
TFPT	0	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
PPP2CA	7	PPP2R1B	4	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology	Goudreault M (2009), Zhou J (2003), Zhou J (2003), Glatter T (2009), Sablina AA (2007), Sablina AA (2007), Havugimana PC (2012), Wan C (2015), Hein MY (2015), Yadav L (2017)	10
KAT5	1	BRD8	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kim J (2010), Kim J (2010), Doyon Y (2004), Huttlin EL (2015), Jacquet K (2016), Huttlin EL (2017)	6
MAX	0	RNF2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Li X (2015), Cheng J (2017), Hauri S (2016), Hauri S (2016)	4
HNRNPU	12	SMARCA5	4	affinity chromatography technology	Hein MY (2015)	1
THAP11	1	TUFT1	1	affinity chromatography technology	Boldt K (2016)	1
EP300	36	ZBTB17	2	affinity chromatography technology	Staller P (2001)	1
HMG20A	0	NUF2	1	affinity chromatography technology	Boldt K (2016)	1
TRIM25	5	BANP	1	affinity chromatography technology	Choudhury NR (2017)	1
UBN1	3	MAX	0	imaging technique	Pchelintsev NA (2013)	1
FOXK1	5	FOXK2	9	affinity chromatography technology	Li X (2015)	1
TRIM25	5	YY1	7	affinity chromatography technology	Choudhury NR (2017)	1
NCKAP5L	4	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
GIT2	2	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
PSMD9	0	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
MYCN	2	TRRAP	31	affinity chromatography technology	Cowling VH (2008)	1
ASF1A	0	PPP1CA	3	affinity chromatography technology	Hein MY (2015)	1
ACTL6A	4	KAT2A	1	biochemical	Park J (2002)	1
GIT2	2	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
FOXK2	9	LIG3	6	affinity chromatography technology	Li X (2015)	1
HNRNPH2	2	MAX	0	biochemical	Havugimana PC (2012)	1
MYCL	0	YEATS4	0	affinity chromatography technology	Huttlin EL (2017)	1
MYCL	0	EPC1	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Cheng J (2017)	2
MBTD1	1	TRRAP	31	affinity chromatography technology, affinity chromatography technology	Jacquet K (2016), Jacquet K (2016)	2
MAX	0	TBP	0	affinity chromatography technology	Li X (2015)	1
TRIM25	5	HNRNPU	12	affinity chromatography technology, affinity chromatography technology	Choudhury NR (2017), Choudhury NR (2017)	2
PHLDB3	1	JUN	0	affinity chromatography technology	Boldt K (2016)	1
PHF21A	4	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
TWIST1	0	PPP2CA	7	affinity chromatography technology	Yang F (2012)	1
RPA2	0	7515	0	affinity chromatography technology, affinity chromatography technology	Marechal A (2014), Huttlin EL (2017)	2
CEBPA	0	JUN	0	affinity chromatography technology	Zada AA (2006)	1
FOXR2	0	MEAF6	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MBTD1	1	EPC2	1	affinity chromatography technology	Jacquet K (2016)	1
SIN3A	13	MXD3	1	two hybrid, affinity chromatography technology	Meroni G (1997), Huttlin EL (2017)	2
RNF2	1	DYNC1H1	41	affinity chromatography technology	Cao Q (2014)	1
HSP90AA1	7	PCGF6	0	affinity chromatography technology	Taipale M (2012)	1
CPSF6	1	CSTF2	2	biochemical	Havugimana PC (2012)	1
HIRA	5	E2F6	2	imaging technique	Pchelintsev NA (2013)	1
MBTD1	1	EP400	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jacquet K (2016), Jacquet K (2016), Cheng J (2017)	3
DZIP3	6	GRIPAP1	0	affinity chromatography technology	Boldt K (2016)	1
RUVBL1	2	SMARCA5	4	biochemical, biochemical	Havugimana PC (2012), Wan C (2015)	2
MAX	0	WIZ	2	affinity chromatography technology	Li X (2015)	1
CCDC93	2	PHF21A	4	affinity chromatography technology	Boldt K (2016)	1
RUVBL1	2	KAT5	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kim JH (2007), Doyon Y (2004), Doyon Y (2004), Kim JH (2005), Jacquet K (2016), Huttlin EL (2017)	6
OIP5	1	TUFT1	1	affinity chromatography technology	Boldt K (2016)	1
EP300	36	PPP2CA	7	affinity chromatography technology	Chen J (2005)	1
GIT2	2	SMAD3	1	two hybrid	Wang J (2011)	1
XPO1	8	PLEKHA5	2	affinity chromatography technology	Kirli K (2015)	1
RNF2	1	TRIM25	5	affinity chromatography technology	Cao Q (2014)	1
MNT	2	MYC	2	affinity chromatography technology, affinity chromatography technology	Matsuoka Y (2008), Matsuoka Y (2008)	2
TRIM25	5	EEF1D	3	affinity chromatography technology	Choudhury NR (2017)	1
MRGBP	0	EP400	19	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Cheng J (2017)	2
FBXW7	2	TRIM25	5	two hybrid	Arroyo R (2015)	1
XPO1	8	YEATS4	0	affinity chromatography technology	Kirli K (2015)	1
NCKAP5L	4	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
CLOCK	0	PPP1CA	3	two hybrid, affinity chromatography technology, affinity chromatography technology	Wallach T (2013), Wallach T (2013), Wallach T (2013)	3
HMG20A	0	PHF21A	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Hein MY (2015), Huttlin EL (2017), Boldt K (2016), Rivero S (2015)	4
EP400	19	KAT5	1	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Fuchs M (2001), Park JH (2010), Park JH (2010), Chailleux C (2010), Kim J (2010), Kim J (2010), Cheng Z (2008), Huttlin EL (2015), Jacquet K (2016), Huttlin EL (2017), Cheng J (2017)	11
ARNTL	2	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
KAT5	1	YEATS4	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2004), Doyon Y (2004), Huttlin EL (2015), Hein MY (2015), Jacquet K (2016), Huttlin EL (2017)	6
HNRNPU	12	MAX	0	affinity chromatography technology	Matsuoka Y (2009)	1
MXD1	2	MNT	2	affinity chromatography technology	Cheng J (2017)	1
MYC	2	USP37	1	affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study	Pan J (2014), Pan J (2014), Pan J (2014), Pan J (2014)	4
ZBTB17	2	MAX	0	pull down	Staller P (2001)	1
NCKAP5L	4	NUF2	1	affinity chromatography technology	Boldt K (2016)	1
VPS53	4	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
MAX	0	GABBR1	0	pull down	Miyamoto-Sato E (2010)	1
GRIPAP1	0	TFPT	0	affinity chromatography technology	Boldt K (2016)	1
USF1	0	PLEKHF2	1	two hybrid	Yu H (2011)	1
JUN	0	FBXW7	2	two hybrid, pull down, enzymatic study, unspecified method, affinity chromatography technology	Nateri AS (2004), Nateri AS (2004), Nateri AS (2004), Nateri AS (2004), Takada M (2017)	5
EP400	19	PPP2R1B	4	affinity chromatography technology	Cheng J (2017)	1
MAX	0	METAP2	3	genetic interference	Horlbeck MA (2018)	1
DYNC1H1	41	FUS	0	biochemical	Havugimana PC (2012)	1
PHLDB3	1	KDM1A	2	affinity chromatography technology	Boldt K (2016)	1
MAPK14	0	FOXK1	5	affinity chromatography technology	Huttlin EL (2015)	1
RING1	2	MGA	9	affinity chromatography technology	Hauri S (2016)	1
NDUFA8	1	KDM1A	2	two hybrid	Weimann M (2013)	1
LEO1	3	PPP2R1A	8	genetic interference	Horlbeck MA (2018)	1
TRIM25	5	PPP1CA	3	affinity chromatography technology	Choudhury NR (2017)	1
ING3	3	KAT5	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Doyon Y (2006), Doyon Y (2006), Kim J (2010), Doyon Y (2004), Doyon Y (2004), Huttlin EL (2015), Hein MY (2015), Jacquet K (2016), Huttlin EL (2017)	10
MBTPS2	1	PPP2R1A	8	genetic interference	Horlbeck MA (2018)	1
CCHCR1	2	TFPT	0	affinity chromatography technology	Boldt K (2016)	1
VPS53	4	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
HMG20A	0	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
RABGAP1L	4	DZIP3	6	affinity chromatography technology	Boldt K (2016)	1
MYC	2	HSPA1A	0	affinity chromatography technology	Agrawal P (2010)	1
CSTF2	2	KAT5	1	two hybrid	Stelzl U (2005)	1
VPS53	4	HAUS6	5	affinity chromatography technology	Boldt K (2016)	1
HDAC2	1	WIZ	2	affinity chromatography technology	Bantscheff M (2011)	1
MORF4L1	1	BRD8	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Sy SM (2009), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	6
OIP5	1	CCDC93	2	affinity chromatography technology	Boldt K (2016)	1
TRIM25	5	MTOR	14	affinity chromatography technology	Choudhury NR (2017)	1
USP37	1	HDAC2	1	bioid	Yeh C (2015)	1
CSNK2A1	15	CPSF6	1	enzymatic study	Zhang M (2011)	1
TRIM25	5	FOXK2	9	affinity chromatography technology	Choudhury NR (2017)	1
HIF1A	1	SIN3A	13	affinity chromatography technology	Cai Q (2013)	1
SNIP1	0	MAX	0	two hybrid	Fujii M (2006)	1
MAX	0	PCGF6	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kim J (2010), Gao Z (2012), Li X (2015), Cheng J (2017), Hauri S (2016), Hauri S (2016)	6
RING1	2	WDR5	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Hauri S (2016), Hauri S (2016)	3
23429	0	MGA	9	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	4
YAF2	1	E2F6	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	4
OIP5	1	THAP11	1	affinity chromatography technology	Boldt K (2016)	1
RUVBL2	4	EPC2	1	affinity chromatography technology	Huttlin EL (2017)	1
PPP1CB	9	WDR5	2	biochemical	Havugimana PC (2012)	1
PHLDB3	1	NCKAP5L	4	affinity chromatography technology	Boldt K (2016)	1
MAX	0	MXI1	2	two hybrid, two hybrid, two hybrid, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology	Rual JF (2005), Billin AN (1999), Gupta K (1998), Meroni G (1997), FitzGerald MJ (1999), Engstrom LD (2004), Dugast-Darzacq C (2004), Kim J (2010), Rolland T (2014), Li X (2015), Hauri S (2016)	11
MAX	0	GOLGA5	5	affinity chromatography technology	Boldt K (2016)	1
FOXR1	3	EPC1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Li X (2015), Huttlin EL (2017)	3
YEATS4	0	ACTL6B	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MAX	0	PLEKHF2	1	two hybrid	Rual JF (2005)	1
PPP1CA	3	LEO1	3	affinity chromatography technology	St-Denis N (2016)	1
MYCN	2	MAX	0	pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, pull down, affinity chromatography technology, protein complementation assay	Blackwood EM (1991), FitzGerald MJ (1999), Kim J (2010), Amente S (2007), Zhao X (2008), Zhao X (2008), Cheng J (2017), Wenzel A (1991), Wenzel A (1991), Wenzel A (1991), Mueller I (2014)	11
YEATS4	0	KDM1A	2	two hybrid, two hybrid, affinity chromatography technology	Piccinni E (2011), Piccinni E (2011), Boldt K (2016)	3
PKN3	4	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
RPRD1A	2	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
HAUS6	5	KDM1A	2	two hybrid, affinity chromatography technology	Weimann M (2013), Boldt K (2016)	2
MAX	0	DMAP1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kim J (2010), Kim J (2010), Li X (2015), Cheng J (2017)	4
RUVBL2	4	YEATS4	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jeronimo C (2007), Hein MY (2015), Huttlin EL (2017)	3
GIT2	2	TUFT1	1	affinity chromatography technology	Boldt K (2016)	1
MORF4L1	1	EPC1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Doyon Y (2004), Huttlin EL (2015), Jacquet K (2016), Huttlin EL (2017)	6
MYC	2	RUVBL2	4	biochemical, affinity chromatography technology, affinity chromatography technology, pull down	Park J (2002), Li W (2010), Koch HB (2007), Liu X (2003)	4
TFPT	0	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
CDK12	3	PPP2R1A	8	genetic interference	Horlbeck MA (2018)	1
PPP1CA	3	RUVBL1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, bioid	Huttlin EL (2015), Huttlin EL (2017), Yadav L (2017), Yadav L (2017)	4
NUF2	1	HAUS6	5	affinity chromatography technology	Boldt K (2016)	1
PPP1CC	2	RUVBL2	4	affinity chromatography technology, bioid	Yadav L (2017), Yadav L (2017)	2
RABGAP1L	4	GRIPAP1	0	affinity chromatography technology	Boldt K (2016)	1
RUVBL2	4	TFPT	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jeronimo C (2007), Cai Y (2007), Cai Y (2007), Huttlin EL (2017)	4
MORF4L2	0	EPC1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Jacquet K (2016), Huttlin EL (2017)	4
HIF1A	1	BANP	1	affinity chromatography technology	Behrends C (2010)	1
TRIM25	5	HSPA1A	0	affinity chromatography technology, affinity chromatography technology	Pauli EK (2014), Choudhury NR (2017)	2
FOXR1	3	BRD8	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Li X (2015), Huttlin EL (2017)	3
METAP2	3	VPS72	2	genetic interference	Horlbeck MA (2018)	1
MORF4L1	1	RUVBL2	4	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Havugimana PC (2012), Huttlin EL (2017)	4
NCKAP5L	4	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
YEATS4	0	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
DZIP3	6	PHF21A	4	affinity chromatography technology	Boldt K (2016)	1
POU5F1	0	EP400	19	affinity chromatography technology	Oliviero G (2015)	1
EPC1	2	VPS72	2	affinity chromatography technology, affinity chromatography technology	Jacquet K (2016), Cheng J (2017)	2
FOXK2	9	H2AFY	1	affinity chromatography technology	Li X (2015)	1
CCHCR1	2	CCDC93	2	affinity chromatography technology	Boldt K (2016)	1
PHLDB3	1	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
OIP5	1	NCKAP5L	4	affinity chromatography technology	Boldt K (2016)	1
MAX	0	BRD8	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kim J (2010), Kim J (2010), Cheng J (2017)	3
HMG20A	0	RCOR1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Huttlin EL (2017), Boldt K (2016), Rivero S (2015)	4
VPS53	4	PHF21A	4	affinity chromatography technology	Boldt K (2016)	1
FOXR1	3	MEAF6	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Li X (2015), Huttlin EL (2017)	3
FOXK1	5	EEF1D	3	biochemical	Kristensen AR (2012)	1
XPO1	8	HAUS6	5	affinity chromatography technology	Kirli K (2015)	1
TRIM25	5	SMAD3	1	affinity chromatography technology	Choudhury NR (2017)	1
PHF21A	4	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
FBXW11	2	NCKAP5L	4	affinity chromatography technology	Kim TY (2014)	1
CCDC93	2	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
SMAD3	1	MAX	0	pull down, imaging technique	Grinberg AV (2003), Chen TC (2014)	2
HAUS6	5	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
RABGAP1L	4	NUF2	1	affinity chromatography technology	Boldt K (2016)	1
ZBTB17	2	MYC	2	pull down, two hybrid, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Staller P (2001), Peukert K (1997), Peukert K (1997), Peukert K (1997), Herold S (2008), Si J (2010), Si J (2010), Gordan JD (2007), Gordan JD (2007), Hervouet E (2009), Hervouet E (2009), Patel JH (2006), Patel JH (2006), Staller P (2001), Vo BT (2016), Vo BT (2016)	16
KDM5C	9	MAX	0	affinity chromatography technology, affinity chromatography technology	Tahiliani M (2007), Hein MY (2015)	2
XPO1	8	TFPT	0	affinity chromatography technology	Kirli K (2015)	1
XPO1	8	CNOT1	10	affinity chromatography technology	Kirli K (2015)	1
ING3	3	TRRAP	31	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Doyon Y (2006), Doyon Y (2004), Hein MY (2015), Hein MY (2015)	5
CCHCR1	2	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
TCP10L	0	GRIPAP1	0	affinity chromatography technology	Huttlin EL (2017)	1
NDUFA8	1	NDUFB2	1	genetic interference	Horlbeck MA (2018)	1
CCHCR1	2	HAUS6	5	affinity chromatography technology	Boldt K (2016)	1
RNF2	1	CBX3	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Cao Q (2014), Hauri S (2016), Hauri S (2016)	4
NUF2	1	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
FBXW7	2	EP400	19	affinity chromatography technology	Kourtis N (2015)	1
CCDC93	2	TFPT	0	affinity chromatography technology	Boldt K (2016)	1
DMAP1	2	VPS72	2	affinity chromatography technology, biochemical, biochemical, affinity chromatography technology	Kim J (2010), Havugimana PC (2012), Wan C (2015), Cheng J (2017)	4
COPS5	0	RUVBL1	2	affinity chromatography technology	Bennett EJ (2010)	1
SMAD4	9	HMG20A	0	two hybrid, affinity chromatography technology	Colland F (2004), Rivero S (2015)	2
RPRD1A	2	PLIN3	3	biochemical	Kristensen AR (2012)	1
FOXR2	0	RUVBL1	2	affinity chromatography technology	Huttlin EL (2015)	1
JUN	0	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
CSNK2A1	15	TFAP2A	1	enzymatic study	Ren K (2011)	1
JUN	0	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
VPS53	4	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
KDM5C	9	MGA	9	affinity chromatography technology	Hein MY (2015)	1
MYC	2	PLIN3	3	affinity chromatography technology	Hein MY (2015)	1
RNF2	1	EEF1D	3	affinity chromatography technology	Cao Q (2014)	1
GIT2	2	PHF21A	4	affinity chromatography technology	Boldt K (2016)	1
MAX	0	NCKAP5L	4	affinity chromatography technology	Boldt K (2016)	1
COPS5	0	HSPA1A	0	affinity chromatography technology	Bennett EJ (2010)	1
DZIP3	6	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
MAX	0	HSPA1A	0	affinity chromatography technology	Kim J (2010)	1
JUN	0	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
CSNK2A1	15	KDM1A	2	affinity chromatography technology	Peng B (2015)	1
HMG20A	0	OIP5	1	affinity chromatography technology	Boldt K (2016)	1
RPA2	0	MSH2	4	affinity chromatography technology	Marechal A (2014)	1
MYCL	0	MEAF6	0	affinity chromatography technology	Huttlin EL (2017)	1
MAX	0	TWIST1	0	affinity chromatography technology	Li X (2015)	1
CCHCR1	2	GRIPAP1	0	affinity chromatography technology	Boldt K (2016)	1
MRGBP	0	HNRNPU	12	affinity chromatography technology	Hayakawa T (2007)	1
MAX	0	EPAS1	6	affinity chromatography technology	Gordan JD (2007)	1
PCGF6	0	E2F6	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Trimarchi JM (2001), Gao Z (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	6
COPS5	0	JUN	0	two hybrid, affinity chromatography technology, imaging technique, pull down, affinity chromatography technology	Claret FX (1996), Claret FX (1996), Claret FX (1996), Bianchi E (2000), Yun HM (2010)	5
HIRA	5	JUN	0	imaging technique, affinity chromatography technology	Pchelintsev NA (2013), Pchelintsev NA (2013)	2
HSP90AA1	7	7515	0	affinity chromatography technology, affinity chromatography technology	Fang Q (2014), Fang Q (2014)	2
PPP2R1A	8	TAF1	9	genetic interference	Horlbeck MA (2018)	1
CCHCR1	2	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
MAX	0	MTOR	14	genetic interference	Horlbeck MA (2018)	1
MYC	2	TFAP2A	1	affinity chromatography technology, pull down	Gaubatz S (1995), Gaubatz S (1995)	2
MAX	0	SPAG9	5	pull down, affinity chromatography technology	Lee CM (2002), Lee CM (2002)	2
SNIP1	0	SMAD4	9	pull down	Kim RH (2000)	1
NCKAP5L	4	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
HSP90AA1	7	UNC45A	1	affinity chromatography technology, pull down, two hybrid	Gano JJ (2010), Chadli A (2008), Gomez-Escalante S (2016)	3
VPS53	4	RCOR1	0	affinity chromatography technology	Boldt K (2016)	1
ING3	3	ACTL6A	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Doyon Y (2006), Doyon Y (2004)	3
PSMD9	0	BANP	1	two hybrid	Rolland T (2014)	1
RUVBL1	2	BRD8	3	affinity chromatography technology	Huttlin EL (2017)	1
TFPT	0	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
PHLDB3	1	VPS53	4	affinity chromatography technology	Boldt K (2016)	1
RECQL	1	MSH2	4	biochemical	Wan C (2015)	1
DZIP3	6	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
EP400	19	RUVBL2	4	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Fuchs M (2001), Tyteca S (2006), Havugimana PC (2012), Huttlin EL (2017), Cloutier P (2017), Cheng J (2017)	6
RUVBL2	4	ACTL6B	4	affinity chromatography technology	Huttlin EL (2017)	1
TUFT1	1	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
TRIM25	5	SSBP1	0	affinity chromatography technology	Choudhury NR (2017)	1
THAP11	1	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
KDM1A	2	HMG20A	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Shi YJ (2005), Bantscheff M (2011), Hein MY (2015), Huttlin EL (2017), Boldt K (2016), Rivero S (2015)	6
HMG20A	0	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
HNRNPU	12	EP300	36	affinity chromatography technology, pull down, affinity chromatography technology, biochemical	Martens JH (2002), Martens JH (2002), Martens JH (2002), Martens JH (2002)	4
HDAC2	1	YY1	7	pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Yang WM (1997), Yao YL (2001), Kalenik JL (1997), Glenn DJ (2009), Sun JM (2007)	5
PPP1CC	2	NUF2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SMAD3	1	CEBPA	0	pull down	Choy L (2003)	1
RABGAP1L	4	GOLGA5	5	affinity chromatography technology	Boldt K (2016)	1
GIT2	2	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
EP300	36	EPAS1	6	pull down, affinity chromatography technology, affinity chromatography technology	Kung AL (2004), Steunou AL (2012), Chen R (2012)	3
LEO1	3	MAX	0	genetic interference	Horlbeck MA (2018)	1
RNF2	1	TFDP1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Hauri S (2016), Hauri S (2016)	3
OIP5	1	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
CLOCK	0	PPP2R1B	4	two hybrid, affinity chromatography technology	Wallach T (2013), Wallach T (2013)	2
RUVBL2	4	PPP1CA	3	affinity chromatography technology, affinity chromatography technology, bioid	Jeronimo C (2007), Yadav L (2017), Yadav L (2017)	3
HSP90AA1	7	FBXW11	2	affinity chromatography technology	Taipale M (2012)	1
TFDP1	3	WDR5	2	affinity chromatography technology, affinity chromatography technology	Hauri S (2016), Hauri S (2016)	2
MAX	0	HAUS6	5	affinity chromatography technology	Boldt K (2016)	1
CSNK2A1	15	7515	0	enzymatic study	Luo H (2004)	1
TRRAP	31	SKP1	0	affinity chromatography technology, affinity chromatography technology, two hybrid	Finkbeiner MG (2008), Finkbeiner MG (2008), Finkbeiner MG (2008)	3
COPS5	0	FUS	0	affinity chromatography technology	Bennett EJ (2010)	1
FBXW7	2	SIN3A	13	affinity chromatography technology	Kourtis N (2015)	1
FOXK1	5	SIN3A	13	affinity chromatography technology	Li X (2015)	1
VPS50	3	VPS53	4	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Wan C (2015), Hein MY (2015), Huttlin EL (2017), Boldt K (2016), Gershlick DC (2016), Gershlick DC (2016), Gershlick DC (2016)	8
RUVBL2	4	SMARCA5	4	biochemical	Havugimana PC (2012)	1
PSMD9	0	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
HIRA	5	RUVBL1	2	affinity chromatography technology	Lee JS (2016)	1
FOXR2	0	VPS72	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
KDM1A	2	XPO1	8	genetic interference	Horlbeck MA (2018)	1
DMAP1	2	MYC	2	affinity chromatography technology	Kim J (2010)	1
FBXW11	2	HNRNPU	12	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kim TY (2014), Coyaud E (2015), Low TY (2014), Huttlin EL (2017)	4
ARNTL	2	TFPT	0	affinity chromatography technology	Boldt K (2016)	1
ARNTL	2	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
PHLDB3	1	TUFT1	1	affinity chromatography technology	Boldt K (2016)	1
ARNTL	2	WDR5	2	two hybrid, affinity chromatography technology	Wallach T (2013), Wallach T (2013)	2
XPO1	8	LEO1	3	affinity chromatography technology, genetic interference	Kirli K (2015), Horlbeck MA (2018)	2
EPC1	2	MBTD1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Jacquet K (2016), Jacquet K (2016), Jacquet K (2016), Jacquet K (2016)	4
CCNT1	3	MAX	0	affinity chromatography technology	Gargano B (2007)	1
THAP11	1	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
YAF2	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Hauri S (2016)	2
FOXK2	9	MNT	2	affinity chromatography technology	Li X (2015)	1
MAX	0	MTERF1	1	affinity chromatography technology	Li X (2015)	1
FOXK2	9	TEAD1	2	biochemical	Wan C (2015)	1
YEATS4	0	MYCN	2	affinity chromatography technology, two hybrid	Piccinni E (2011), Piccinni E (2011)	2
FOXK2	9	SIN3A	13	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, biochemical, pull down	Li X (2015), Ji Z (2014), Ji Z (2014), Shan L (2016), Shan L (2016), Shan L (2016), Shan L (2016)	7
FUS	0	TUBA1A	13	affinity chromatography technology	Wang T (2014)	1
7515	0	LIG3	6	two hybrid, affinity chromatography technology, biochemical, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology	Whitehouse CJ (2001), Ewing RM (2007), Caldecott KW (1994), Nash RA (1997), Dulic A (2001), Taylor RM (1998), Ogi T (2010), Hein MY (2015)	8
YAF2	1	L3MBTL2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	4
SMAD3	1	KDM5C	9	affinity chromatography technology	Kim TD (2008)	1
MBTPS2	1	RPL35	1	genetic interference	Horlbeck MA (2018)	1
TRIM25	5	L3MBTL2	1	affinity chromatography technology	Choudhury NR (2017)	1
MORF4L1	1	TRRAP	31	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Hayakawa T (2010), Sy SM (2009), Doyon Y (2004), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	6
JUN	0	HSP90AA1	7	two hybrid, pull down	Bandyopadhyay S (2010), Miyamoto-Sato E (2010)	2
SIN3A	13	CSNK2A1	15	affinity chromatography technology, affinity chromatography technology, biochemical, biochemical	Sun JM (2007), Sun JM (2007), Havugimana PC (2012), Wan C (2015)	4
COPS5	0	FBXW11	2	affinity chromatography technology	Bennett EJ (2010)	1
MAPK14	0	MAX	0	imaging technique	Chen TC (2014)	1
L3MBTL2	1	RNF2	1	affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Trojer P (2011), Trojer P (2011), Trojer P (2011), Trojer P (2011), Gao Z (2012), Cao Q (2014), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	9
GOLGA5	5	HAUS6	5	affinity chromatography technology	Boldt K (2016)	1
KDM1A	2	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
HDAC2	1	KDM1A	2	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, genetic interference	Hakimi MA (2002), Hakimi MA (2003), Hakimi MA (2003), Hakimi MA (2003), Tong JK (1998), Lee MG (2005), Humphrey GW (2001), Humphrey GW (2001), Zibetti C (2010), Wang Y (2009), Li Q (2011), Cui S (2011), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Wong AS (2016)	17
USF1	0	SMARCA5	4	affinity chromatography technology	Huang S (2007)	1
UBN1	3	E2F6	2	imaging technique	Pchelintsev NA (2013)	1
MAX	0	HDAC2	1	affinity chromatography technology	Hauri S (2016)	1
MAX	0	RPA2	0	affinity chromatography technology	Li X (2015)	1
XPO1	8	METAP2	3	affinity chromatography technology	Kirli K (2015)	1
PCGF6	0	CSNK2A1	15	affinity chromatography technology	Huttlin EL (2017)	1
HIF1A	1	SMAD3	1	imaging technique, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Sanchez-Elsner T (2001), Sanchez-Elsner T (2001), Sanchez-Elsner T (2001), Sanchez-Elsner T (2001), Sanchez-Elsner T (2002)	5
MORF4L2	0	SIN3A	13	affinity chromatography technology	Yochum GS (2002)	1
RUVBL1	2	RUVBL2	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, biochemical, two hybrid, biochemical, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ewing RM (2007), Ewing RM (2007), Jeronimo C (2007), Jeronimo C (2007), Puri T (2007), Rashid S (2009), Kim JH (2007), Kim JH (2007), McKeegan KS (2007), Lee JS (2010), Lee JS (2010), Cai Y (2007), Cai Y (2007), Ikura T (2000), Havugimana PC (2012), Venteicher AS (2008), Venteicher AS (2008), Bauer A (2000), Bauer A (2000), Bauer A (2000), Salzer U (1999), Izumi N (2010), Kristensen AR (2012), Rolland T (2014), Wan C (2015), Jeganathan A (2015), Huttlin EL (2017), Cloutier P (2017), Cloutier P (2017)	29
HAUS6	5	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
TUFT1	1	PHF21A	4	affinity chromatography technology	Boldt K (2016)	1
MORF4L1	1	KAT5	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Doyon Y (2004), Doyon Y (2004), Huttlin EL (2015), Jacquet K (2016), Huttlin EL (2017)	7
COPS5	0	SKP1	0	affinity chromatography technology	Bennett EJ (2010)	1
ING3	3	RUVBL2	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Hein MY (2015), Huttlin EL (2017)	3
HSP90AA1	7	DYNC1H1	41	affinity chromatography technology	Gano JJ (2010)	1
RNF2	1	KDM1A	2	affinity chromatography technology	Cao Q (2014)	1
TRIM25	5	HIRA	5	affinity chromatography technology	Choudhury NR (2017)	1
HMG20A	0	GRIPAP1	0	affinity chromatography technology	Boldt K (2016)	1
MYCL	0	MRGBP	0	affinity chromatography technology	Huttlin EL (2017)	1
HSP90AA1	7	FBXW7	2	affinity chromatography technology	Taipale M (2012)	1
RNF2	1	HNRNPU	12	affinity chromatography technology	Cao Q (2014)	1
GRIPAP1	0	CCNT1	3	pull down	Kino T (2002)	1
MAX	0	TFDP1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Li X (2015), Cheng J (2017), Hauri S (2016), Hauri S (2016)	4
ARNTL	2	EPAS1	6	two hybrid, pull down	Hogenesch JB (1998), Hogenesch JB (1998)	2
MORF4L1	1	VPS72	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
THAP11	1	RCOR1	0	affinity chromatography technology	Boldt K (2016)	1
TRIM25	5	XPO1	8	affinity chromatography technology	Choudhury NR (2017)	1
PHF21A	4	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
RPRD1A	2	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
MAPK14	0	MYC	2	fluorescent resonance energy transfe	Ivanov AA (2017)	1
MORF4L1	1	ACTL6A	4	affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Doyon Y (2004)	2
FOXR1	3	MBTD1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Li X (2015), Huttlin EL (2017)	3
RUVBL1	2	YEATS4	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jeronimo C (2007), Hein MY (2015), Huttlin EL (2017)	3
RPA2	0	FUS	0	affinity chromatography technology	Marechal A (2014)	1
VPS53	4	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
CLOCK	0	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
MEAF6	0	EP400	19	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Cheng J (2017)	2
VPS53	4	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
MAX	0	VRK3	0	affinity chromatography technology	Li X (2015)	1
MECP2	36	YY1	7	pull down, far western blotting, affinity chromatography technology	Forlani G (2010), Forlani G (2010), Forlani G (2010)	3
MEAF6	0	MORF4L2	0	affinity chromatography technology	Huttlin EL (2017)	1
WDR5	2	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Hauri S (2016)	2
OIP5	1	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
MAX	0	REXO5	1	affinity chromatography technology	Hauri S (2016)	1
OIP5	1	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
DYNC1H1	41	MAX	0	biochemical	Havugimana PC (2012)	1
RABGAP1L	4	RCOR1	0	affinity chromatography technology	Boldt K (2016)	1
PPP2CB	1	PLEKHA5	2	affinity chromatography technology	Hein MY (2015)	1
CBX1	0	23429	0	affinity chromatography technology, affinity chromatography technology	Hauri S (2016), Hauri S (2016)	2
ING3	3	BRD8	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Doyon Y (2006), Hein MY (2015)	3
OIP5	1	HAUS6	5	affinity chromatography technology	Boldt K (2016)	1
CCHCR1	2	PHF21A	4	affinity chromatography technology	Boldt K (2016)	1
TFAP2A	1	YY1	7	affinity chromatography technology, imaging technique	Begon DY (2005), Begon DY (2005)	2
MAX	0	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
HNRNPH2	2	PKN3	4	affinity chromatography technology	Hein MY (2015)	1
GOLGA5	5	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
ARNTL	2	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
MAX	0	TFAP2A	1	affinity chromatography technology	Li X (2015)	1
EPAS1	6	KDM1A	2	affinity chromatography technology	Steunou AL (2012)	1
L3MBTL2	1	MGA	9	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Hauri S (2016)	2
CCNT1	3	LEO1	3	biochemical	Havugimana PC (2012)	1
PHF21A	4	TFPT	0	affinity chromatography technology	Boldt K (2016)	1
GIT2	2	DZIP3	6	affinity chromatography technology	Boldt K (2016)	1
ACTL6A	4	KAT5	1	biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Park J (2002), Doyon Y (2004), Doyon Y (2004), Ikura T (2000), Jacquet K (2016), Cheng J (2017)	6
MAX	0	EPC1	2	affinity chromatography technology, affinity chromatography technology	Cheng J (2017), Cheng J (2017)	2
RUVBL2	4	HDAC2	1	affinity chromatography technology	Rashid S (2009)	1
TRIM25	5	VPS72	2	affinity chromatography technology	Choudhury NR (2017)	1
CCHCR1	2	GOLGA5	5	affinity chromatography technology	Boldt K (2016)	1
MBTPS2	1	MED9	1	genetic interference	Horlbeck MA (2018)	1
USP37	1	CBX3	1	bioid	Yeh C (2015)	1
EP400	19	ACTL6B	4	affinity chromatography technology	Cheng J (2017)	1
YEATS4	0	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
PHF21A	4	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
ASF1A	0	TAF1	9	pull down, x-ray crystallography	Akai Y (2010), Akai Y (2010)	2
TUFT1	1	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
MBTD1	1	RUVBL2	4	affinity chromatography technology, affinity chromatography technology	Jacquet K (2016), Huttlin EL (2017)	2
FUS	0	HNRNPU	12	biochemical, affinity chromatography technology	Kristensen AR (2012), Wang T (2014)	2
TFDP1	3	MGA	9	affinity chromatography technology	Hauri S (2016)	1
MRGBP	0	KAT5	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cai Y (2003), Cai Y (2003), Sardiu ME (2008), Hayakawa T (2007), Huttlin EL (2015), Huttlin EL (2017)	6
FOXK2	9	SMARCA5	4	affinity chromatography technology	Li X (2015)	1
JUN	0	LIG3	6	affinity chromatography technology	Li X (2015)	1
CLOCK	0	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
MECP2	36	BAZ1A	5	affinity chromatography technology	Huttlin EL (2017)	1
HMG20A	0	THAP11	1	affinity chromatography technology	Boldt K (2016)	1
UBN1	3	ASF1A	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Tang Y (2012), Hein MY (2015), Huttlin EL (2017), Pchelintsev NA (2013), Pchelintsev NA (2013)	5
TWIST1	0	WDR5	2	affinity chromatography technology	Wu MZ (2011)	1
HDAC2	1	MXD1	2	affinity chromatography technology, pull down	Laherty CD (1997), Spronk CA (2000)	2
MAX	0	LIG3	6	affinity chromatography technology	Li X (2015)	1
MAX	0	MORF4L1	1	affinity chromatography technology	Cheng J (2017)	1
MXD1	2	YAF2	1	affinity chromatography technology	Cheng J (2017)	1
MED9	1	SPAG9	5	affinity chromatography technology	Huttlin EL (2017)	1
HIRA	5	TFAP2A	1	imaging technique	Pchelintsev NA (2013)	1
POU5F1	0	WDR5	2	affinity chromatography technology, biochemical, affinity chromatography technology, pull down	Ang YS (2011), Ang YS (2011), Ang YS (2011), Ang YS (2011)	4
RCOR1	0	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
MORF4L2	0	ACTL6A	4	affinity chromatography technology	Hayakawa T (2007)	1
PHF21A	4	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
MORF4L1	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Hayakawa T (2007), Hayakawa T (2010), Doyon Y (2004), Wan C (2015)	4
PHF21A	4	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
CCHCR1	2	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
CBX3	1	H2AFY	1	biochemical	Havugimana PC (2012)	1
MORF4L2	0	BRD8	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Huttlin EL (2017)	3
TRIM25	5	CNOT1	10	affinity chromatography technology	Choudhury NR (2017)	1
PIM1	2	CBX1	0	affinity chromatography technology	Bhattacharya N (2002)	1
DNMT3L	2	MAX	0	pull down, imaging technique, affinity chromatography technology	Pacaud R (2014), Pacaud R (2014), Pacaud R (2014)	3
MAX	0	COPS5	0	two hybrid	Bandyopadhyay S (2010)	1
MYCL	0	RUVBL2	4	affinity chromatography technology	Huttlin EL (2017)	1
NUF2	1	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
GIT2	2	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
PCGF6	0	RING1	2	affinity chromatography technology, two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Akasaka T (2002), Woodsmith J (2012), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	6
CCDC93	2	DZIP3	6	affinity chromatography technology	Boldt K (2016)	1
PHLDB3	1	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
RUVBL2	4	BRD8	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Cloutier P (2017)	2
GIT2	2	PHLDB3	1	affinity chromatography technology	Boldt K (2016)	1
MBTD1	1	RUVBL1	2	affinity chromatography technology, affinity chromatography technology	Jacquet K (2016), Huttlin EL (2017)	2
WDR5	2	L3MBTL2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	4
TWIST1	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology, imaging technique	Fu J (2011), Fu J (2011), Fu J (2012)	3
DMAP1	2	BRD8	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kim J (2010), Kim J (2010), Doyon Y (2004)	3
PPP2R1A	8	HSPA1A	0	affinity chromatography technology	Fogeron ML (2013)	1
RPA2	0	HNRNPU	12	affinity chromatography technology	Marechal A (2014)	1
MORF4L2	0	RUVBL1	2	affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010)	2
YY1	7	RUVBL1	2	biochemical, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Wu S (2007), Wu S (2007), Wu S (2007), Cai Y (2007), Cai Y (2007), Huttlin EL (2017), Hauri S (2016)	7
PHLDB3	1	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
MAX	0	WDR5	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kim J (2010), Hauri S (2016), Hauri S (2016)	3
CSNK2A1	15	EEF1D	3	enzymatic study, enzymatic study	Sheu GT (1999), Zhang M (2011)	2
SIN3A	13	TBP	0	affinity chromatography technology	Nakamura T (2002)	1
PHLDB3	1	RCOR1	0	affinity chromatography technology	Boldt K (2016)	1
CBX3	1	E2F6	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ogawa H (2002), Hauri S (2016), Hauri S (2016)	3
MAX	0	PLIN3	3	two hybrid	Wang J (2011)	1
KDM1A	2	CCDC93	2	affinity chromatography technology	Boldt K (2016)	1
ACTL6A	4	MYCL	0	affinity chromatography technology	Cheng J (2017)	1
USP37	1	FBXW11	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, bioid, affinity chromatography technology	Sowa ME (2009), Sowa ME (2009), Kim TY (2014), Low TY (2014), Yeh C (2015), Huttlin EL (2017)	6
TUFT1	1	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
MYCL	0	DMAP1	2	affinity chromatography technology	Huttlin EL (2017)	1
VPS50	3	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
YAF2	1	WDR5	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Huttlin EL (2015), Hauri S (2016), Hauri S (2016)	4
GOLGA5	5	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
RPRD1A	2	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
MTOR	14	NDUFA8	1	genetic interference	Horlbeck MA (2018)	1
FOXR1	3	MAX	0	affinity chromatography technology	Li X (2015)	1
HIRA	5	EP300	36	imaging technique	Pchelintsev NA (2013)	1
MYC	2	EPC1	2	affinity chromatography technology	Kim J (2010)	1
GRIPAP1	0	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
XPO1	8	FOXK2	9	affinity chromatography technology	Kirli K (2015)	1
CCDC93	2	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
SMAD3	1	SIN3A	13	pull down	Liberati NT (2001)	1
MEAF6	0	BRD8	3	affinity chromatography technology	Huttlin EL (2017)	1
RCOR1	0	GOLGA5	5	affinity chromatography technology	Boldt K (2016)	1
TRRAP	31	RUVBL2	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Huttlin EL (2017), Cloutier P (2017)	3
RABGAP1L	4	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
SMAD3	1	EPAS1	6	imaging technique, two hybrid, imaging technique	Chae KS (2011), Colland F (2004), Chen TC (2014)	3
PHF21A	4	GOLGA5	5	affinity chromatography technology	Boldt K (2016)	1
HDAC2	1	HIF1A	1	pull down, imaging technique	Mahon PC (2001), Chen TC (2014)	2
RABGEF1	1	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
MAX	0	ING3	3	affinity chromatography technology	Cheng J (2017)	1
GOLGA5	5	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
GIT2	2	RCOR1	0	affinity chromatography technology	Boldt K (2016)	1
DZIP3	6	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
SMARCA1	2	SMARCA5	4	biochemical	Havugimana PC (2012)	1
TRIM25	5	RPL34	2	affinity chromatography technology	Choudhury NR (2017)	1
CBX3	1	WIZ	2	affinity chromatography technology	Hauri S (2016)	1
MORF4L1	1	TUBA1A	13	affinity chromatography technology	Hayakawa T (2007)	1
CDK12	3	LEO1	3	genetic interference	Horlbeck MA (2018)	1
GIT2	2	OIP5	1	affinity chromatography technology	Boldt K (2016)	1
CBX1	0	RING1	2	affinity chromatography technology	Hauri S (2016)	1
MAX	0	CBX3	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cheng J (2017), Hauri S (2016), Hauri S (2016)	3
PHF21A	4	HDAC2	1	biochemical, pull down, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2002), Iwase S (2004), Hakimi MA (2003), Joshi P (2013)	4
NUF2	1	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
PIM1	2	CBX3	1	two hybrid, enzymatic study, pull down, affinity chromatography technology	Koike N (2000), Koike N (2000), Koike N (2000), Koike N (2000)	4
KAT5	1	RUVBL2	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2004), Cheng Z (2008), Jacquet K (2016), Huttlin EL (2017)	4
GRIPAP1	0	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
FOXR1	3	MRGBP	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Li X (2015), Huttlin EL (2017)	3
MYC	2	CAVIN1	0	affinity chromatography technology	Agrawal P (2010)	1
RABGAP1L	4	THAP11	1	affinity chromatography technology	Boldt K (2016)	1
OIP5	1	GRIPAP1	0	affinity chromatography technology	Boldt K (2016)	1
CCDC93	2	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
FOXK2	9	SAP130	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Li X (2015), Shan L (2016), Shan L (2016), Shan L (2016)	4
FOXR2	0	EPC2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
RABGAP1L	4	CCDC93	2	affinity chromatography technology	Boldt K (2016)	1
MRGBP	0	VPS72	2	affinity chromatography technology, affinity chromatography technology	Sardiu ME (2008), Huttlin EL (2017)	2
EP400	19	ACTL6A	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Fuchs M (2001), Cheng J (2017), Cheng J (2017)	3
CCHCR1	2	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
DZIP3	6	GOLGA5	5	affinity chromatography technology	Boldt K (2016)	1
CSNK2A1	15	MYCN	2	enzymatic study	Hagiwara T (1992)	1
FOXR2	0	ING3	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CCHCR1	2	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
EP400	19	MYCN	2	affinity chromatography technology	Cheng J (2017)	1
TRIM25	5	PPP1CC	2	affinity chromatography technology	Choudhury NR (2017)	1
MXD1	2	MGA	9	affinity chromatography technology	Cheng J (2017)	1
GRIPAP1	0	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
OIP5	1	GOLGA5	5	affinity chromatography technology	Boldt K (2016)	1
MXD4	3	MAX	0	two hybrid, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Billin AN (1999), Gupta K (1998), FitzGerald MJ (1999), Li X (2015), Cheng J (2017), Hauri S (2016)	6
MAPK14	0	COPS5	0	two hybrid	Wang J (2008)	1
ARL6IP5	0	7515	0	affinity chromatography technology, affinity chromatography technology	Wang S (2009), Wang S (2009)	2
CCDC93	2	HAUS6	5	affinity chromatography technology	Boldt K (2016)	1
YAF2	1	MGA	9	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Huttlin EL (2017), Hauri S (2016)	3
MAX	0	TXLNG	1	two hybrid	Bandyopadhyay S (2010)	1
MEAF6	0	EPC2	1	affinity chromatography technology	Huttlin EL (2017)	1
RNF2	1	MGA	9	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Cao Q (2014), Hein MY (2015), Hauri S (2016)	4
COPS5	0	PPP1CC	2	affinity chromatography technology, two hybrid, two hybrid	Bennett EJ (2010), Esteves SL (2012), Fardilha M (2011)	3
MTOR	14	SMAD4	9	genetic interference	Shen JP (2017)	1
MYC	2	TAF1	9	affinity chromatography technology	Hein MY (2015)	1
KAT5	1	MYC	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Frank SR (2003), Frank SR (2003), Liu T (2007), Liu T (2007), Kim J (2010), Kim J (2010)	6
CCHCR1	2	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
THAP11	1	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
CEBPA	0	KAT5	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique	Bararia D (2008), Bararia D (2008), Bararia D (2008), Bararia D (2008), Bararia D (2008)	5
CLOCK	0	PPP1CC	2	two hybrid, affinity chromatography technology	Wallach T (2013), Wallach T (2013)	2
ING3	3	MEAF6	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Doyon Y (2006), Hein MY (2015), Huttlin EL (2017)	4
MAX	0	ACTL6B	4	affinity chromatography technology	Cheng J (2017)	1
FOXK2	9	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Li X (2015), Shan L (2016), Shan L (2016), Shan L (2016)	4
GRIPAP1	0	NCKAP5L	4	affinity chromatography technology	Boldt K (2016)	1
CNOT1	10	PSPH	0	genetic interference	Horlbeck MA (2018)	1
HIRA	5	MAX	0	imaging technique	Pchelintsev NA (2013)	1
RABGAP1L	4	TFPT	0	affinity chromatography technology	Boldt K (2016)	1
YEATS4	0	MTOR	14	affinity chromatography technology	Hein MY (2015)	1
RPA2	0	MORF4L2	0	affinity chromatography technology	Marechal A (2014)	1
EPC1	2	RUVBL2	4	affinity chromatography technology, affinity chromatography technology	Jacquet K (2016), Huttlin EL (2017)	2
OIP5	1	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
MAX	0	KAT2A	1	affinity chromatography technology	McMahon SB (2000)	1
PHLDB3	1	CCDC93	2	affinity chromatography technology	Boldt K (2016)	1
E2F6	2	RING1	2	affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology	Trimarchi JM (2001), Trimarchi JM (2001), Trimarchi JM (2001), Trimarchi JM (2001), Hauri S (2016), Hauri S (2016)	6
PPP1CA	3	XPO1	8	biochemical	Kristensen AR (2012)	1
MAX	0	SSBP1	0	genetic interference	Horlbeck MA (2018)	1
MAX	0	NDUFB2	1	genetic interference	Horlbeck MA (2018)	1
EPAS1	6	JUN	0	fluorescent resonance energy transfe	Reinke AW (2013)	1
23429	0	CBX3	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Hauri S (2016), Hauri S (2016)	3
POU5F1	0	YEATS4	0	affinity chromatography technology	Oliviero G (2015)	1
PLEKHF2	1	MEAF6	0	two hybrid, two hybrid	Venkatesan K (2009), Rolland T (2014)	2
MYC	2	ACTL6A	4	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Park J (2002), Park J (2002), Koch HB (2007), Li X (2015)	4
PHLDB3	1	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
RUVBL2	4	DMAP1	2	affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology	Jeronimo C (2007), Doyon Y (2004), Havugimana PC (2012), Wan C (2015), Huttlin EL (2017), Cloutier P (2017)	6
RNF2	1	DMAP1	2	affinity chromatography technology	Cao Q (2014)	1
MAX	0	SAP130	2	affinity chromatography technology	Li X (2015)	1
GIT2	2	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
MAX	0	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
ASF1A	0	JUN	0	imaging technique	Pchelintsev NA (2013)	1
MAX	0	MEAF6	0	affinity chromatography technology	Cheng J (2017)	1
MEAF6	0	DMAP1	2	affinity chromatography technology	Huttlin EL (2017)	1
YEATS4	0	MBTD1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Hein MY (2015), Jacquet K (2016), Huttlin EL (2017)	4
PCGF6	0	CBX1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	3
GIT2	2	NCKAP5L	4	affinity chromatography technology	Boldt K (2016)	1
GIT2	2	VPS53	4	affinity chromatography technology	Boldt K (2016)	1
MAX	0	THAP11	1	affinity chromatography technology	Boldt K (2016)	1
MRGBP	0	DMAP1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Cai Y (2003), Cai Y (2003), Hayakawa T (2007), Wan C (2015), Huttlin EL (2017)	5
HSP90AA1	7	KAT5	1	affinity chromatography technology	Taipale M (2012)	1
TUFT1	1	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
MAX	0	RUVBL1	2	affinity chromatography technology	Cheng J (2017)	1
MYC	2	SKP1	0	affinity chromatography technology, affinity chromatography technology, two hybrid	Koch HB (2007), von der Lehr N (2003), Wang J (2011)	3
KAT2A	1	TRRAP	31	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	McMahon SB (2000), Helmlinger D (2006), Meyer KD (2008), Krebs AR (2010), Kim J (2010), Kim J (2010), Liu X (2003)	7
RUVBL2	4	VPS72	2	biochemical, affinity chromatography technology, affinity chromatography technology	Havugimana PC (2012), Huttlin EL (2017), Cheng J (2017)	3
RABGAP1L	4	OIP5	1	affinity chromatography technology	Boldt K (2016)	1
HMG20A	0	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
PHLDB3	1	CCHCR1	2	affinity chromatography technology	Boldt K (2016)	1
KDM5C	9	MTOR	14	genetic interference	Shen JP (2017)	1
CBX3	1	PCGF6	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ogawa H (2002), Gao Z (2012), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	5
CCHCR1	2	NCKAP5L	4	affinity chromatography technology	Boldt K (2016)	1
NUF2	1	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
MORF4L1	1	DMAP1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Doyon Y (2004), Doyon Y (2004), Huttlin EL (2015), Huttlin EL (2017)	5
OIP5	1	JUN	0	affinity chromatography technology	Boldt K (2016)	1
YEATS4	0	ACTL6A	4	affinity chromatography technology	Hein MY (2015)	1
COPS5	0	HSP90AA1	7	affinity chromatography technology	Bennett EJ (2010)	1
MORF4L2	0	DMAP1	2	affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Huttlin EL (2017)	2
THAP11	1	GOLGA5	5	affinity chromatography technology	Boldt K (2016)	1
PHLDB3	1	GOLGA5	5	affinity chromatography technology	Boldt K (2016)	1
MAX	0	MXD1	2	pull down, pull down, two hybrid, x-ray crystallography, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Lee CM (2002), Ayer DE (1993), Gupta K (1998), Nair SK (2003), Hatakeyama S (2005), Wang Z (2006), Gordan JD (2007), Ayer DE (1993), Naderi S (1999), Huttlin EL (2015), FitzGerald MJ (1999), Huttlin EL (2017), Cheng J (2017), Hauri S (2016)	14
MYC	2	MSH2	4	affinity chromatography technology, affinity chromatography technology, fluorescent resonance energy transfe	Mac Partlin M (2003), Koch HB (2007), Ivanov AA (2017)	3
CBX1	0	WIZ	2	affinity chromatography technology	Hauri S (2016)	1
MAX	0	MORF4L2	0	affinity chromatography technology	Cheng J (2017)	1
MYC	2	MAX	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, two hybrid, pull down, pull down, pull down, two hybrid, two hybrid, two hybrid, pull down, x-ray crystallography, pull down, two hybrid, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, fluorescent resonance energy transfe, affinity chromatography technology, x-ray crystallography, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ewing RM (2007), McMahon SB (2000), McMahon SB (1998), Cheng SW (1999), Mac Partlin M (2003), Mac Partlin M (2003), Blackwood EM (1991), Lee CM (2002), Billin AN (1999), Gupta K (1998), Meroni G (1997), Nair SK (2003), Nair SK (2003), FitzGerald MJ (1999), Meroni G (2000), Hatakeyama S (2005), Bandyopadhyay S (2010), Matsuoka Y (2009), Cowling VH (2006), Wang Z (2006), Faiola F (2005), Siegel PM (2003), Veldman T (2003), Patel JH (2004), Liu T (2007), Zhang Y (2007), Gordan JD (2007), Gordan JD (2007), Gargano B (2007), Zippo A (2007), Zippo A (2007), Zhang P (2010), Kim J (2010), Kim J (2010), Kim J (2010), Kim J (2010), Koch HB (2007), Koch HB (2007), Patel JH (2006), Lavigne P (1998), Amente S (2007), Ayer DE (1993), Huang Z (2004), Huang Z (2004), Okano HJ (1999), Agrawal P (2010), Agrawal P (2010), Wong WJ (2013), Wang J (2011), Yu L (2009), Liu X (2003), Hein MY (2015), Li X (2015), Li X (2015), Kalkat M (2014), Hauri S (2016)	56
L3MBTL2	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Hauri S (2016)	2
MYC	2	DYNC1H1	41	affinity chromatography technology	Koch HB (2007)	1
PSMD9	0	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
CLOCK	0	ARNTL	2	two hybrid, two hybrid, two hybrid, two hybrid, affinity chromatography technology, pull down, two hybrid, affinity chromatography technology, protein complementation assay, affinity chromatography technology, affinity chromatography technology	Ooe N (2004), McNamara P (2001), McNamara P (2001), Hogenesch JB (1998), Hosoda H (2009), Alhopuro P (2010), Wallach T (2013), Wallach T (2013), Lee Y (2015), Huttlin EL (2017), Boldt K (2016)	11
TRIM25	5	HMG20A	0	affinity chromatography technology	Choudhury NR (2017)	1
PHF21A	4	NUF2	1	affinity chromatography technology	Boldt K (2016)	1
DNMT3L	2	MECP2	36	pull down	Pacaud R (2014)	1
TUFT1	1	GOLGA5	5	affinity chromatography technology	Boldt K (2016)	1
PPP1CC	2	PPP1CA	3	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, bioid	Huttlin EL (2015), Wan C (2015), Hein MY (2015), Huttlin EL (2017), Boldt K (2016), Yadav L (2017), Yadav L (2017), Yadav L (2017)	8
HDAC2	1	H2AFY	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Chakravarthy S (2005), Wu C (2007), Wu C (2007)	3
MAX	0	EEF1D	3	affinity chromatography technology	Li X (2015)	1
RABGAP1L	4	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
MAX	0	PSMD6	0	genetic interference	Horlbeck MA (2018)	1
TRRAP	31	VPS72	2	affinity chromatography technology, affinity chromatography technology, genetic interference	Hein MY (2015), Cheng J (2017), Horlbeck MA (2018)	3
NCKAP5L	4	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
FOXR1	3	MYCN	2	affinity chromatography technology	Li X (2015)	1
TUFT1	1	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
PIM1	2	TFPT	0	two hybrid	Rolland T (2014)	1
SNIP1	0	PPIE	1	affinity chromatography technology	Huttlin EL (2017)	1
RNF2	1	RPL34	2	affinity chromatography technology	Cao Q (2014)	1
MTOR	14	NDUFB2	1	genetic interference	Horlbeck MA (2018)	1
VPS53	4	NCKAP5L	4	affinity chromatography technology	Boldt K (2016)	1
MXD1	2	L3MBTL2	1	affinity chromatography technology	Cheng J (2017)	1
SNIP1	0	EP300	36	affinity chromatography technology, affinity chromatography technology	Kim RH (2000), Kim RH (2000)	2
USP37	1	PPP1CB	9	bioid	Yeh C (2015)	1
RABGAP1L	4	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
SMAD3	1	KAT2A	1	affinity chromatography technology	Kahata K (2004)	1
RCOR1	0	NCKAP5L	4	affinity chromatography technology	Boldt K (2016)	1
CBX1	0	ARG1	0	affinity chromatography technology	Hauri S (2016)	1
MAX	0	PHF21A	4	affinity chromatography technology	Boldt K (2016)	1
GRIPAP1	0	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
YEATS4	0	FUS	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
DZIP3	6	NUF2	1	affinity chromatography technology	Boldt K (2016)	1
EP300	36	WDR5	2	affinity chromatography technology	Tang Z (2013)	1
EPC1	2	EP400	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jacquet K (2016), Cheng J (2017), Cheng J (2017)	3
MAX	0	RPL34	2	pull down	Miyamoto-Sato E (2010)	1
YEATS4	0	RPRD1A	2	affinity chromatography technology	Boldt K (2016)	1
MAX	0	MBTPS2	1	genetic interference	Horlbeck MA (2018)	1
MAX	0	ARG1	0	affinity chromatography technology	Hauri S (2016)	1
COPS5	0	HNRNPH2	2	affinity chromatography technology	Bennett EJ (2010)	1
TRRAP	31	EPC2	1	affinity chromatography technology	Hein MY (2015)	1
MYCL	0	RUVBL1	2	affinity chromatography technology	Huttlin EL (2017)	1
RCOR1	0	KDM1A	2	biochemical, affinity chromatography technology, affinity chromatography technology, pull down, pull down, x-ray crystallography, affinity chromatography technology, pull down, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, biochemical, affinity chromatography technology	Hakimi MA (2002), You A (2001), You A (2001), Gocke CB (2008), Chen Y (2006), Yang M (2006), Shi YJ (2005), Shi YJ (2005), Lee MG (2005), Lee MG (2005), Humphrey GW (2001), Humphrey GW (2001), Zibetti C (2010), Hwang S (2011), Lin Y (2010), Nicholson TB (2011), Nicholson TB (2011), Cui S (2011), Adamo A (2011), Adamo A (2011), Bantscheff M (2011), Mosammaparast N (2013), Lin Y (2010), Wan C (2015), Boldt K (2016)	25
E2F6	2	23429	0	two hybrid, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Trimarchi JM (2001), Trimarchi JM (2001), Trimarchi JM (2001), Trimarchi JM (2001), Trimarchi JM (2001), Schlisio S (2002), Gao Z (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	10
RUVBL1	2	ACTL6B	4	affinity chromatography technology	Huttlin EL (2017)	1
CSNK2A1	15	LEO1	3	biochemical, enzymatic study	Havugimana PC (2012), Zhang M (2011)	2
OIP5	1	DZIP3	6	affinity chromatography technology	Boldt K (2016)	1
MAX	0	RPL35	1	pull down	Miyamoto-Sato E (2010)	1
MAX	0	RING1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cheng J (2017), Hauri S (2016), Hauri S (2016)	3
HIRA	5	MYC	2	imaging technique, affinity chromatography technology	Pchelintsev NA (2013), Pchelintsev NA (2013)	2
FBXW11	2	PPP2R1B	4	two hybrid	Wallach T (2013)	1
TRIM25	5	TEAD1	2	affinity chromatography technology	Choudhury NR (2017)	1
MAX	0	RCOR1	0	affinity chromatography technology	Boldt K (2016)	1
GIT2	2	CCDC93	2	affinity chromatography technology	Boldt K (2016)	1
DMAP1	2	EPC2	1	affinity chromatography technology	Kim J (2010)	1
XPO1	8	FOXK1	5	affinity chromatography technology	Kirli K (2015)	1
RNF2	1	SMARCA5	4	affinity chromatography technology	Cao Q (2014)	1
MYC	2	HIF1A	1	affinity chromatography technology, affinity chromatography technology, fluorescent resonance energy transfe	Koshiji M (2004), Koshiji M (2004), Ivanov AA (2017)	3
MAPK14	0	KAT2A	1	fluorescent resonance energy transfe	Ivanov AA (2017)	1
RUVBL1	2	TBP	0	pull down	Bauer A (1998)	1
MORF4L1	1	EPC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Huttlin EL (2015), Huttlin EL (2017)	4
MORF4L1	1	MEAF6	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
PSMD9	0	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
GIT2	2	THAP11	1	affinity chromatography technology	Boldt K (2016)	1
HIF1A	1	RUVBL2	4	affinity chromatography technology	Lee JS (2010)	1
RUVBL2	4	TBP	0	pull down	Bauer A (2000)	1
EPC1	2	ACTL6A	4	affinity chromatography technology	Jacquet K (2016)	1
E2F6	2	TFDP1	3	two hybrid, pull down, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Rual JF (2005), Cartwright P (1998), Rolland T (2014), Huttlin EL (2015), Trimarchi JM (1998), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	8
CLOCK	0	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
MAX	0	ACTL6A	4	affinity chromatography technology, affinity chromatography technology	Cheng J (2017), Cheng J (2017)	2
MECP2	36	CBX3	1	affinity chromatography technology	Gonzales ML (2012)	1
CBX1	0	MAX	0	affinity chromatography technology	Hauri S (2016)	1
SMAD3	1	SMAD4	9	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, x-ray crystallography, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, two hybrid, two hybrid, pull down, pull down, pull down, two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, protein complementation assay, affinity chromatography technology, affinity chromatography technology	Seoane J (2004), Moren A (2003), Wu JW (2002), Nakao A (1997), Hanai J (1999), Lebrun JJ (1999), Poncelet AC (2001), Jablonska E (2010), Prunier C (2003), Kato Y (2002), Kaimori A (2010), Tang LY (2011), Tang LY (2011), Dupont S (2009), Dupont S (2009), Pardali K (2000), Kardassis D (2000), Xu L (2003), Fu G (2011), Chen W (2007), Kang JM (2012), Gao S (2009), Li H (2009), Li H (2009), Brown KA (2008), Brown KA (2008), Halder SK (2005), Barrios-Rodiles M (2005), Dai F (2007), Dai F (2007), Chacko BM (2004), Chacko BM (2004), Chacko BM (2004), Stroschein SL (1999), Stroschein SL (1999), Stroschein SL (1999), Wu RY (1997), Wu RY (1997), Wu RY (1997), Wu RY (1997), Tomita M (2004), Colland F (2004), Colland F (2004), Tang Y (2003), Ding L (2009), Fattet L (2013), Wang J (2011), Xue J (2014), Ali A (2013), Gao S (2009), Yamakawa N (2002), Yamakawa N (2002), Wang G (2005), Li X (2015), Zhou F (2014), Yang Y (2015), Yan X (2016), Yan X (2016), Wu Y (2017), Wu Y (2017)	60
COPS5	0	HNRNPU	12	affinity chromatography technology	Bennett EJ (2010)	1
ASF1A	0	MYC	2	imaging technique	Pchelintsev NA (2013)	1
CLOCK	0	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
MYCL	0	MBTD1	1	affinity chromatography technology	Huttlin EL (2017)	1
23429	0	SKP1	0	affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Hauri S (2016)	2
CCHCR1	2	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
HMG20A	0	TFPT	0	affinity chromatography technology	Boldt K (2016)	1
L3MBTL2	1	RING1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	3
RUVBL1	2	DMAP1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology	Jeronimo C (2007), Negishi M (2009), Doyon Y (2004), Doyon Y (2004), Havugimana PC (2012), Wan C (2015), Huttlin EL (2017), Cloutier P (2017)	8
HIF1A	1	TUBA1A	13	imaging technique, affinity chromatography technology	Carbonaro M (2012), Carbonaro M (2012)	2
MORF4L2	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Hayakawa T (2007), Hayakawa T (2007), Hayakawa T (2010), Wan C (2015)	4
EPAS1	6	HIF1A	1	affinity chromatography technology	Steunou AL (2012)	1
ACTL6A	4	TRRAP	31	biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Park J (2002), Park J (2002), Havugimana PC (2012), Cheng J (2017)	4
MAX	0	100126595	0	affinity chromatography technology	Cheng J (2017)	1
VPS53	4	NUF2	1	affinity chromatography technology	Boldt K (2016)	1
YY1	7	ACTL6A	4	biochemical, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Wu S (2007), Wu S (2007), Wu S (2007), Cai Y (2007), Hauri S (2016)	5
MAX	0	SDHC	1	genetic interference	Horlbeck MA (2018)	1
TUFT1	1	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
L3MBTL2	1	CBX3	1	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Trojer P (2007), Trojer P (2011), Trojer P (2011), Trojer P (2011), Hauri S (2016), Hauri S (2016)	6
KAT5	1	TRRAP	31	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Chailleux C (2010), Kim J (2010), Kim J (2010), Doyon Y (2004), Doyon Y (2004), Ikura T (2000), Ikura T (2000), Huttlin EL (2015), Jacquet K (2016), Huttlin EL (2017)	11
TRIM25	5	PPP2CB	1	affinity chromatography technology	Choudhury NR (2017)	1
VPS53	4	TFPT	0	affinity chromatography technology	Boldt K (2016)	1
PPP1CA	3	SMARCA5	4	biochemical	Havugimana PC (2012)	1
MXD3	1	MXI1	2	affinity chromatography technology	Huttlin EL (2017)	1
RABGAP1L	4	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
JUN	0	HAUS6	5	affinity chromatography technology	Boldt K (2016)	1
SMAD4	9	CEBPA	0	pull down	Choy L (2003)	1
RCOR1	0	HDAC2	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2002), You A (2001), You A (2001), Battaglioli E (2002), Humphrey GW (2001), Humphrey GW (2001), Bantscheff M (2011), Joshi P (2013)	8
FBXW7	2	MED9	1	affinity chromatography technology	Davis MA (2013)	1
JUN	0	TFAP2A	1	affinity chromatography technology	Li X (2015)	1
YEATS4	0	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
EP300	36	KAT5	1	affinity chromatography technology, affinity chromatography technology	Col E (2005), Col E (2005)	2
FBXW11	2	SKP1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Suzuki H (2000), Sowa ME (2009), Watanabe N (2004), Fuchs SY (1999), Tan P (1999), Herter JR (2002), Lievens S (2009), Lievens S (2009), DAnnibale S (2014), Kim TY (2014), Kim TY (2014), Coyaud E (2015), Low TY (2014), Hein MY (2015), Liu X (2017), Hauri S (2016)	16
YAF2	1	SKP1	0	affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Hauri S (2016)	2
OIP5	1	CCHCR1	2	affinity chromatography technology	Boldt K (2016)	1
FBXW7	2	PPP1CB	9	affinity chromatography technology	Kourtis N (2015)	1
MAX	0	TAF1	9	two hybrid	Bandyopadhyay S (2010)	1
RNF2	1	PCGF6	0	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, pull down, two hybrid, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Trojer P (2011), Gao Z (2012), Gao Z (2012), Gao Z (2012), Akasaka T (2002), Akasaka T (2002), Akasaka T (2002), Woodsmith J (2012), Cao Q (2014), Hein MY (2015), Taherbhoy AM (2015), Taherbhoy AM (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	15
TFPT	0	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
PHLDB3	1	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
FOXK2	9	KMT2D	30	affinity chromatography technology	Li X (2015)	1
MRGBP	0	EPC1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cai Y (2003), Hayakawa T (2007), Jacquet K (2016), Huttlin EL (2017)	4
NCKAP5L	4	GOLGA5	5	affinity chromatography technology	Boldt K (2016)	1
MAX	0	MRGBP	0	affinity chromatography technology	Cheng J (2017)	1
23429	0	YY1	7	affinity chromatography technology, pull down, two hybrid, affinity chromatography technology	Garcia E (1999), Garcia E (1999), Sawa C (2002), Sawa C (2002)	4
HNRNPU	12	PKN3	4	affinity chromatography technology	Hein MY (2015)	1
TRIM25	5	CUX1	7	affinity chromatography technology	Choudhury NR (2017)	1
TRIM25	5	SIN3A	13	affinity chromatography technology	Choudhury NR (2017)	1
MXD1	2	MXD3	1	affinity chromatography technology	Cheng J (2017)	1
DMAP1	2	KAT5	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kim J (2010), Kim J (2010), Kim J (2010), Kim J (2010), Doyon Y (2004), Doyon Y (2004), Doyon Y (2004), Huttlin EL (2015), Jacquet K (2016), Huttlin EL (2017)	10
MXD1	2	MXD4	3	affinity chromatography technology	Cheng J (2017)	1
DNMT3L	2	SMAD4	9	pull down	Pacaud R (2014)	1
MAX	0	UNC45A	1	two hybrid	Rolland T (2014)	1
SMARCA5	4	HDAC2	1	biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, imaging technique, biochemical, biochemical	Hakimi MA (2002), Hakimi MA (2002), Zhou J (2005), Zhou J (2005), Zhou J (2005), Havugimana PC (2012), Wan C (2015)	7
HMG20A	0	NCKAP5L	4	affinity chromatography technology	Boldt K (2016)	1
KDM5C	9	HDAC2	1	affinity chromatography technology	Tahiliani M (2007)	1
FBXW11	2	CNOT1	10	affinity chromatography technology, affinity chromatography technology	Kim TY (2014), Coyaud E (2015)	2
YAF2	1	CSNK2A1	15	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	4
PHF21A	4	RCOR1	0	biochemical, pull down, affinity chromatography technology	Hakimi MA (2002), Iwase S (2004), Boldt K (2016)	3
TUBA1A	13	MTOR	14	genetic interference	Srivas R (2016)	1
MYC	2	SMAD3	1	affinity chromatography technology, pull down, two hybrid	Feng XH (2002), Feng XH (2002), Feng XH (2002)	3
GOLGA5	5	NUF2	1	affinity chromatography technology	Boldt K (2016)	1
RABGAP1L	4	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
PHLDB3	1	OIP5	1	affinity chromatography technology	Boldt K (2016)	1
OIP5	1	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
MAX	0	KMT2D	30	biochemical	Havugimana PC (2012)	1
GRIPAP1	0	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
FOXK2	9	SMARCA1	2	affinity chromatography technology	Li X (2015)	1
MYC	2	PPP2CA	7	affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology	Arnold HK (2009), Junttila MR (2007), Cianfanelli V (2015), Cianfanelli V (2015)	4
MAX	0	USP37	1	affinity chromatography technology	Pan J (2014)	1
CBX1	0	MGA	9	affinity chromatography technology	Hauri S (2016)	1
TRIM25	5	PPP2R1A	8	affinity chromatography technology	Choudhury NR (2017)	1
XPO1	8	L3MBTL2	1	affinity chromatography technology	Kirli K (2015)	1
MYCL	0	ING3	3	affinity chromatography technology	Huttlin EL (2017)	1
OIP5	1	TFPT	0	affinity chromatography technology	Boldt K (2016)	1
PHLDB3	1	PHF21A	4	affinity chromatography technology	Boldt K (2016)	1
JUN	0	BANP	1	affinity chromatography technology	Li X (2015)	1
RCOR1	0	HAUS6	5	affinity chromatography technology	Boldt K (2016)	1
EPAS1	6	SIN3A	13	affinity chromatography technology	Steunou AL (2012)	1
POU5F1	0	SIN3A	13	affinity chromatography technology	Oliviero G (2015)	1
MAX	0	CCDC93	2	affinity chromatography technology	Boldt K (2016)	1
KAT5	1	EPC1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kim J (2010), Doyon Y (2004), Doyon Y (2004), Huttlin EL (2015), Jacquet K (2016), Jacquet K (2016), Huttlin EL (2017), Cheng J (2017)	8
ING3	3	DMAP1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Doyon Y (2006), Kim J (2010), Kim J (2010), Doyon Y (2004), Hein MY (2015)	6
FOXR2	0	MORF4L1	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
TUFT1	1	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
ACTL6A	4	VPS72	2	affinity chromatography technology, affinity chromatography technology	Cheng J (2017), Cheng J (2017)	2
PPP1CA	3	MAX	0	affinity chromatography technology	Flores-Delgado G (2007)	1
TUFT1	1	DZIP3	6	affinity chromatography technology	Boldt K (2016)	1
TUBA1A	13	MYC	2	affinity chromatography technology	Conacci-Sorrell M (2010)	1
FOXR2	0	TRRAP	31	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Li X (2015), Huttlin EL (2017)	3
FOXR2	0	MRGBP	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
RNF2	1	CBX1	0	affinity chromatography technology, affinity chromatography technology	Cao Q (2014), Hauri S (2016)	2
HSP90AA1	7	MAX	0	affinity chromatography technology	Taipale M (2012)	1
MBTD1	1	MEAF6	0	affinity chromatography technology, affinity chromatography technology	Jacquet K (2016), Huttlin EL (2017)	2
CEBPA	0	VPS72	2	affinity chromatography technology	Bararia D (2008)	1
HIF1A	1	CEBPA	0	imaging technique, imaging technique, pull down, pull down, affinity chromatography technology, affinity chromatography technology	Zhao XY (2011), Zhao XY (2011), Yang L (2008), Yang L (2008), Yang L (2008), Yang L (2008)	6
HNRNPU	12	PSMD6	0	biochemical	Wan C (2015)	1
PHLDB3	1	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
RCOR1	0	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
HMG20A	0	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
MYC	2	CEBPA	0	affinity chromatography technology	Tinel M (2003)	1
FOXR2	0	DMAP1	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SIN3A	13	MXD1	2	pull down, x-ray crystallography, pull down, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Swanson KA (2004), Swanson KA (2004), Brubaker K (2000), Ayer DE (1995), Farias EF (2010), Huttlin EL (2015), Huttlin EL (2017), Cheng J (2017)	8
USF1	0	WDR5	2	affinity chromatography technology, affinity chromatography technology	Huang S (2007), Li X (2011)	2
UBN1	3	MYC	2	imaging technique	Pchelintsev NA (2013)	1
RUVBL2	4	DYNC1H1	41	biochemical	Wan C (2015)	1
RPA2	0	SMARCA5	4	affinity chromatography technology	Marechal A (2014)	1
SMAD3	1	YY1	7	pull down, affinity chromatography technology	Kurisaki K (2003), Brown KA (2008)	2
YEATS4	0	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
MAPK14	0	EP300	36	pull down, enzymatic study, affinity chromatography technology	Pillai VB (2011), Pillai VB (2011), Saha RN (2007)	3
MYCL	0	MAX	0	pull down, pull down, affinity chromatography technology, affinity chromatography technology	Blackwood EM (1991), FitzGerald MJ (1999), Cheng J (2017), Hauri S (2016)	4
SMARCA5	4	SIN3A	13	affinity chromatography technology	Burgio G (2008)	1
YEATS4	0	MEAF6	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
23429	0	CSNK2A1	15	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	5
KAT5	1	VPS72	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kim J (2010), Huttlin EL (2015), Jacquet K (2016), Huttlin EL (2017), Cheng J (2017)	5
TUFT1	1	RCOR1	0	affinity chromatography technology	Boldt K (2016)	1
USF1	0	SMARCA1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huang S (2007), Li X (2011), Li X (2011)	3
YEATS4	0	EPC1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Hein MY (2015), Jacquet K (2016), Huttlin EL (2017)	4
PPP2R1A	8	ARL6IP5	0	affinity chromatography technology	Boldt K (2016)	1
RPA2	0	PPP1CC	2	affinity chromatography technology	Marechal A (2014)	1
RPA2	0	KDM1A	2	affinity chromatography technology	Marechal A (2014)	1
GRIPAP1	0	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
CBX3	1	WDR5	2	affinity chromatography technology, affinity chromatography technology	Hauri S (2016), Hauri S (2016)	2
CCDC93	2	GRIPAP1	0	affinity chromatography technology	Boldt K (2016)	1
MRGBP	0	RUVBL1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cai Y (2003), Hayakawa T (2007), Huttlin EL (2017)	3
MORF4L1	1	MRGBP	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, biochemical, affinity chromatography technology	Bowman BR (2006), Cai Y (2003), Sardiu ME (2008), Hayakawa T (2007), Hayakawa T (2007), Hayakawa T (2007), Hayakawa T (2010), Sy SM (2009), Rolland T (2014), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	12
SPAG9	5	MAPK14	0	affinity chromatography technology	Lee CM (2002)	1
LEO1	3	NDUFA8	1	genetic interference, genetic interference	Horlbeck MA (2018), Horlbeck MA (2018)	2
DZIP3	6	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
CCDC93	2	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
HMG20A	0	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
MECP2	36	METAP2	3	affinity chromatography technology	Huttlin EL (2017)	1
FBXW7	2	MYCN	2	affinity chromatography technology, affinity chromatography technology	Otto T (2009), Otto T (2009)	2
PHF21A	4	JUN	0	affinity chromatography technology	Boldt K (2016)	1
CCDC93	2	NCKAP5L	4	affinity chromatography technology	Boldt K (2016)	1
HSP90AA1	7	HSPA1A	0	pull down, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology	Kanelakis KC (2002), Gano JJ (2010), Falsone SF (2005), Brychzy A (2003), Scholz GM (2001), Scholz GM (2001)	6
FOXR1	3	MYC	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Li X (2015), Huttlin EL (2017)	3
FBXW11	2	HNRNPH2	2	affinity chromatography technology	Coyaud E (2015)	1
MYC	2	SMARCA5	4	affinity chromatography technology	Koch HB (2007)	1
PHF21A	4	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
MAX	0	BAZ1A	5	affinity chromatography technology	Li X (2015)	1
TFDP1	3	HDAC2	1	affinity chromatography technology	Hauri S (2016)	1
MAPK14	0	CSNK2A1	15	affinity chromatography technology, pull down	Sayed M (2000), Sayed M (2000)	2
TRRAP	31	EP400	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Fuchs M (2001), Fuchs M (2001), Fuchs M (2001), Hein MY (2015), Cheng J (2017)	5
E2F6	2	MGA	9	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	3
MAX	0	7515	0	affinity chromatography technology	Li X (2015)	1
MAX	0	FOXK2	9	affinity chromatography technology, affinity chromatography technology	Li X (2015), Li X (2015)	2
TFPT	0	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
TUFT1	1	NCKAP5L	4	affinity chromatography technology	Boldt K (2016)	1
HMG20A	0	CLOCK	0	affinity chromatography technology	Boldt K (2016)	1
CSNK2A1	15	MYC	2	enzymatic study	Channavajhala P (2002)	1
USP37	1	RPA2	0	bioid	Yeh C (2015)	1
TRIM25	5	MAX	0	affinity chromatography technology	Choudhury NR (2017)	1
FBXW7	2	MTOR	14	affinity chromatography technology	Mao JH (2008)	1
HSP90AA1	7	SSBP1	0	affinity chromatography technology	Skarra DV (2011)	1
HMG20A	0	GOLGA5	5	affinity chromatography technology	Boldt K (2016)	1
HIF1A	1	PLEKHA5	2	affinity chromatography technology	Hein MY (2015)	1
DZIP3	6	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
FOXR2	0	MORF4L2	0	affinity chromatography technology	Huttlin EL (2015)	1
EP300	36	YY1	7	enzymatic study, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down	Yao YL (2001), Lee JS (1995), Lee JS (1995), Lee JS (1995), Lee JS (1995), Kadeppagari RK (2009), Kadeppagari RK (2009), Kadeppagari RK (2009), Sankar N (2008), Sankar N (2008), Sankar N (2008), Wang CC (2007), Wang CC (2007), Galvin KM (1997)	14
USF1	0	TRRAP	31	affinity chromatography technology, affinity chromatography technology	Huang S (2007), Li X (2011)	2
VPS53	4	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
YAF2	1	TFDP1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Huttlin EL (2017), Hauri S (2016)	3
PPP2CB	1	PPP2CA	7	biochemical, affinity chromatography technology	Wan C (2015), St-Denis N (2016)	2
TUFT1	1	KAT5	1	two hybrid	Rolland T (2014)	1
MAX	0	TFPT	0	affinity chromatography technology	Boldt K (2016)	1
ARNTL	2	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
CEBPA	0	MNT	2	affinity chromatography technology	Bararia D (2008)	1
MAX	0	GIT2	2	affinity chromatography technology	Boldt K (2016)	1
YEATS4	0	VPS72	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017)	3
RABGAP1L	4	PHF21A	4	affinity chromatography technology	Boldt K (2016)	1
FOXK2	9	RCOR1	0	affinity chromatography technology, affinity chromatography technology, biochemical, pull down	Shan L (2016), Shan L (2016), Shan L (2016), Shan L (2016)	4
CCDC93	2	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
CEBPA	0	PPP2CA	7	affinity chromatography technology, pull down, biochemical	Wang GL (2004), Wang GL (2004), Wang GL (2004)	3
MORF4L2	0	EPC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Huttlin EL (2017)	3
YY1	7	RUVBL2	4	biochemical, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Wu S (2007), Wu S (2007), Wu S (2007), Cai Y (2007), Cai Y (2007), Vella P (2011), Huttlin EL (2017), Hauri S (2016)	8
MAX	0	MORC2	8	affinity chromatography technology	Li X (2015)	1
MAX	0	E2F6	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Li X (2015), Cheng J (2017), Hauri S (2016), Hauri S (2016)	4
TRIM25	5	FUS	0	affinity chromatography technology, affinity chromatography technology	Choudhury NR (2017), Choudhury NR (2017)	2
SAP130	2	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Fleischer TC (2003), Xue Y (1998), Joshi P (2013)	3
MORF4L2	0	TUBA1A	13	affinity chromatography technology	Hayakawa T (2007)	1
MYC	2	SSBP1	0	affinity chromatography technology	Agrawal P (2010)	1
TCP10L	0	MXD4	3	two hybrid, affinity chromatography technology, two hybrid	Jiang DJ (2004), Jiang DJ (2004), Wang J (2011)	3
COPS5	0	DYNC1H1	41	affinity chromatography technology	Bennett EJ (2010)	1
XPO1	8	MTOR	14	affinity chromatography technology	Kirli K (2015)	1
HMG20A	0	RABGAP1L	4	affinity chromatography technology	Boldt K (2016)	1
SKP1	0	FBXW7	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, x-ray crystallography, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, fluorescent resonance energy transfe, pull down, affinity chromatography technology, affinity chromatography technology	Staropoli JF (2003), Wu G (2001), Wu G (2001), Wu G (2001), Hao B (2007), Schuelein C (2011), Busino L (2012), Busino L (2012), Busino L (2012), Matsumoto A (2011), Watanabe N (2004), Strohmaier H (2001), Choi BH (2014), Yumimoto K (2012), Kourtis N (2015), Kourtis N (2015), Hao J (2015), Tian X (2015), Liu YQ (2015), Gorelik M (2016), Gorelik M (2016), Gorelik M (2016), Yeh CH (2016), Reiterer V (2017), Reiterer V (2017), Reiterer V (2017), Kuchay S (2017), Ye M (2017)	28
TRIM25	5	SMAD4	9	affinity chromatography technology	Choudhury NR (2017)	1
MAX	0	OIP5	1	affinity chromatography technology	Boldt K (2016)	1
MTOR	14	EP300	36	enzymatic study	Wan W (2017)	1
MAX	0	SKP1	0	affinity chromatography technology	Hauri S (2016)	1
THAP11	1	NCKAP5L	4	affinity chromatography technology	Boldt K (2016)	1
PHLDB3	1	HAUS6	5	affinity chromatography technology	Boldt K (2016)	1
FOXR1	3	VPS72	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
OIP5	1	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
XPO1	8	RUVBL1	2	affinity chromatography technology	Kirli K (2015)	1
TUFT1	1	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
XPO1	8	MAX	0	affinity chromatography technology	Kirli K (2015)	1
OIP5	1	PHF21A	4	affinity chromatography technology	Boldt K (2016)	1
EP300	36	HIF1A	1	affinity chromatography technology, x-ray crystallography, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, unspecified method, affinity chromatography technology, fluorescent resonance energy transfe, pull down, affinity chromatography technology, affinity chromatography technology, pull down, unspecified method, pull down, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, pull down, pull down	Lando D (2002), Freedman SJ (2002), Lewis MD (2004), Matt T (2004), Sang N (2002), Luo W (2010), Freedman SJ (2003), Bodily JM (2011), Lee YM (2009), Lee YM (2009), Lee YM (2009), Kung AL (2004), Kung AL (2004), Kung AL (2004), Land SC (2007), Zhang Y (2010), Zhang Y (2010), Fath DM (2006), Fath DM (2006), Lee SJ (2013), Wang D (2014), Kaluz S (2006), Kaluz S (2006), Kaluz S (2006), Shin DH (2008), Shin DH (2008), Wang Y (2012), Huang C (2009), Hewitson KS (2002), Cook KM (2009), Cook KM (2009), Hubbi ME (2012), Kim SY (2014), Sang N (2003), Sang N (2003), Sang N (2003), Yasinska IM (2003), Na YR (2013), Na YR (2013), Mendonca DB (2011), Arany Z (1996), Arany Z (1996), Chen R (2012), Li SH (2008), Galbraith MD (2013), Chen Z (2014), Li Q (2012), Geng H (2012), Geng H (2012), Kato H (2004), Lim JH (2010), Kyle HF (2015), Kyle HF (2015), Rath S (2016), Kimura M (2008), Dubey R (2013)	56
NDUFA8	1	PSMD6	0	genetic interference	Horlbeck MA (2018)	1
FOXR1	3	EPC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Li X (2015), Huttlin EL (2017)	3
TAF1	9	TBP	0	pull down, biochemical, biochemical, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Siegert JL (1999), Bellorini M (1997), Ruppert S (1993), OBrien T (1998), Knuesel MT (2009), Hilton TL (2005), Liu X (2008), Demeny MA (2007), Dikstein R (1996), Wieczorek E (1998), Dantonel JC (1997), Klemm RD (1995), Dallas PB (1997), Ogryzko VV (1998), Gupta K (2017)	15
MYC	2	KDM1A	2	two hybrid	Weimann M (2013)	1
DZIP3	6	RABGEF1	1	affinity chromatography technology	Boldt K (2016)	1
PPP1CA	3	ARNTL	2	affinity chromatography technology	Wallach T (2013)	1
GOLGA5	5	PKN3	4	affinity chromatography technology	Boldt K (2016)	1
PPP1CC	2	MAX	0	affinity chromatography technology	Flores-Delgado G (2007)	1
SMAD3	1	PPP2R1A	8	two hybrid	Colland F (2004)	1
SNIP1	0	MYC	2	two hybrid, affinity chromatography technology, affinity chromatography technology	Fujii M (2006), Fujii M (2006), Fujii M (2006)	3
FOXR2	0	BRD8	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MEAF6	0	TRRAP	31	affinity chromatography technology	Huttlin EL (2017)	1
HSP90AA1	7	ARNTL	2	pull down	Hogenesch JB (1997)	1
GIT2	2	HMG20A	0	affinity chromatography technology	Boldt K (2016)	1
DYNC1H1	41	PPP2R1A	8	genetic interference	Horlbeck MA (2018)	1
GIT2	2	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
YY1	7	TFPT	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cai Y (2007), Cai Y (2007), Hauri S (2016)	3
MAX	0	HMG20A	0	affinity chromatography technology	Boldt K (2016)	1
CCHCR1	2	RCOR1	0	affinity chromatography technology	Boldt K (2016)	1
COPS5	0	HIF1A	1	affinity chromatography technology, pull down, affinity chromatography technology	Bemis L (2004), Bemis L (2004), No YR (2015)	3
PCGF6	0	23429	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Gao Z (2012), Gao Z (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	7
DZIP3	6	NCKAP5L	4	affinity chromatography technology	Boldt K (2016)	1
KDM1A	2	HSPA1A	0	affinity chromatography technology	Shi YJ (2005)	1
PSMD9	0	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
FOXR2	0	YEATS4	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
KAT5	1	MBTD1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Jacquet K (2016), Jacquet K (2016), Jacquet K (2016), Huttlin EL (2017)	5
PHF21A	4	KDM1A	2	biochemical, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2002), Iwase S (2004), Hakimi MA (2003), Shi YJ (2005), Lee MG (2005), Boldt K (2016)	6
GRIPAP1	0	NUF2	1	affinity chromatography technology	Boldt K (2016)	1
VPS72	2	PPP2CA	7	affinity chromatography technology	Cheng J (2017)	1
HSP90AA1	7	CSNK2A1	15	pull down, enzymatic study, enzymatic study, affinity chromatography technology	Miyata Y (1995), Muller P (2012), Zhang M (2011), Woo SH (2009)	4
MORF4L2	0	MBTD1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Jacquet K (2016), Jacquet K (2016), Huttlin EL (2017)	4
PPP2R1A	8	PPP2R1B	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Goudreault M (2009), Sablina AA (2007), Fogeron ML (2013), Wan C (2015), Hein MY (2015)	5
RPA2	0	ARG1	0	affinity chromatography technology	Marechal A (2014)	1
PPP1CB	9	PPP1CC	2	biochemical, affinity chromatography technology	Wan C (2015), Huttlin EL (2017)	2
TWIST1	0	YY1	7	pull down	Kotlyar M (2015)	1
GIT2	2	NUF2	1	affinity chromatography technology	Boldt K (2016)	1
GIT2	2	ARNTL	2	affinity chromatography technology	Boldt K (2016)	1
DNMT3L	2	YY1	7	pull down	Pacaud R (2014)	1
ASF1A	0	HIRA	5	x-ray crystallography, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Tang Y (2006), Tang Y (2006), Tang Y (2006), Zhang R (2005), Zhang R (2005), Galvani A (2008), Yang JH (2011), Zhang R (2007), Hein MY (2015), Huttlin EL (2017), Lee JS (2016), Lee JS (2016), Pchelintsev NA (2013), Pchelintsev NA (2013)	14
RUVBL1	2	TFPT	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cai Y (2007), Cai Y (2007), Huttlin EL (2017)	3
FOXR2	0	EP400	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Li X (2015), Huttlin EL (2017)	3
CPSF6	1	MAX	0	biochemical	Havugimana PC (2012)	1
RNF2	1	SKP1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Cao Q (2014), Hauri S (2016), Hauri S (2016)	4
MAX	0	YAF2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cheng J (2017), Hauri S (2016), Hauri S (2016)	3
FUS	0	CPSF6	1	affinity chromatography technology	Wang T (2014)	1
JUN	0	EEF1D	3	affinity chromatography technology	Li X (2015)	1
MAPK14	0	JUN	0	enzymatic study	Thakur N (2014)	1
BANP	1	FOXR1	3	two hybrid	Rolland T (2014)	1
EP400	19	RUVBL1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Fuchs M (2001), Fuchs M (2001), Fuchs M (2001), Fuchs M (2001), Kim JH (2007), Kim JH (2007), Havugimana PC (2012), Huttlin EL (2017), Cloutier P (2017), Cheng J (2017)	10
EP300	36	JUN	0	pull down, biochemical, x-ray crystallography, affinity chromatography technology, pull down, enzymatic study, pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Campbell KM (2002), Campbell KM (2002), Campbell KM (2002), Subbaramaiah K (2002), Duyndam MC (1999), Wang WM (2011), Deng WG (2004), Deng WG (2004), Cheng SE (2011), Cheng SE (2011), Kim BK (2014), Vries RG (2001), Deng WG (2003), Liu L (2017), Liu L (2017)	15
MAX	0	MBTD1	1	affinity chromatography technology	Cheng J (2017)	1
BFSP2	1	BANP	1	affinity chromatography technology	Huttlin EL (2017)	1
MYC	2	EPC2	1	affinity chromatography technology	Kim J (2010)	1
KDM1A	2	TUFT1	1	affinity chromatography technology	Boldt K (2016)	1
PPP2R1A	8	PLEKHA5	2	affinity chromatography technology	Hein MY (2015)	1
EPAS1	6	XPO1	8	affinity chromatography technology	Steunou AL (2012)	1
ACTL6A	4	METAP2	3	affinity chromatography technology	Huttlin EL (2015)	1
RABGAP1L	4	CCHCR1	2	affinity chromatography technology	Boldt K (2016)	1
SIN3A	13	SAP130	2	affinity chromatography technology, affinity chromatography technology, biochemical	Fleischer TC (2003), Fleischer TC (2003), Wan C (2015)	3
MAX	0	FTH1	0	pull down, pull down	Miyamoto-Sato E (2010), Miyamoto-Sato E (2010)	2
TUFT1	1	HAUS6	5	affinity chromatography technology	Boldt K (2016)	1
XPO1	8	CSNK2A1	15	affinity chromatography technology	Kirli K (2015)	1
MAX	0	H2AFY	1	affinity chromatography technology	Li X (2015)	1
MAX	0	MSH2	4	pull down, affinity chromatography technology, imaging technique	Mac Partlin M (2003), Mac Partlin M (2003), Chen TC (2014)	3
OIP5	1	KDM1A	2	two hybrid, affinity chromatography technology	Weimann M (2013), Boldt K (2016)	2
EP300	36	RUVBL2	4	pull down	Karmakar S (2010)	1
COPS5	0	SAP130	2	affinity chromatography technology	Menon S (2008)	1
TRIM25	5	EPAS1	6	affinity chromatography technology	Choudhury NR (2017)	1
SMARCA5	4	BAZ1A	5	biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, pull down, pull down, biochemical, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Bochar DA (2000), Bochar DA (2000), Poot RA (2000), Poot RA (2000), Bozhenok L (2002), Bozhenok L (2002), Yasui D (2002), Yasui D (2002), Hakimi MA (2002), LeRoy G (2000), LeRoy G (2000), LeRoy G (2000), Klement K (2014), Klement K (2014)	14
LEO1	3	SSBP1	0	genetic interference	Horlbeck MA (2018)	1
NCKAP5L	4	TFPT	0	affinity chromatography technology	Boldt K (2016)	1
MECP2	36	SIN3A	13	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jones PL (1998), Jones PL (1998), Nan X (1998), Nan X (1998), Yu F (2000), Martinowich K (2003), Klose RJ (2004), Gonzales ML (2012)	8
MYC	2	CDK12	3	genetic interference	Toyoshima M (2012)	1
MAX	0	NDUFA8	1	genetic interference	Horlbeck MA (2018)	1
NDUFA8	1	SDHC	1	genetic interference	Horlbeck MA (2018)	1
KDM1A	2	EP300	36	affinity chromatography technology	Garcia-Bassets I (2007)	1
ING3	3	VPS72	2	affinity chromatography technology	Hein MY (2015)	1
GIT2	2	HAUS6	5	affinity chromatography technology	Boldt K (2016)	1
MAX	0	PIM1	2	affinity chromatography technology, affinity chromatography technology	Zippo A (2007), Zippo A (2007)	2
MYC	2	NDUFA8	1	affinity chromatography technology	Koch HB (2007)	1
RABGAP1L	4	YEATS4	0	affinity chromatography technology	Boldt K (2016)	1
PPP1CC	2	SKP1	0	affinity chromatography technology	Flores-Delgado G (2007)	1
XPO1	8	SMAD4	9	affinity chromatography technology	Kirli K (2015)	1
PHF21A	4	HAUS6	5	affinity chromatography technology	Boldt K (2016)	1
WDR5	2	MYC	2	affinity chromatography technology	Carugo A (2016)	1
PHF21A	4	BANP	1	two hybrid	Rolland T (2014)	1
RNF2	1	H2AFY	1	affinity chromatography technology	Cao Q (2014)	1
PCGF6	0	WDR5	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Gao Z (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	6
FOXR1	3	TRRAP	31	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Li X (2015), Huttlin EL (2017)	3
MED9	1	METAP2	3	genetic interference	Horlbeck MA (2018)	1
TRIM25	5	SPAG9	5	affinity chromatography technology	Choudhury NR (2017)	1
MAX	0	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
EPAS1	6	TFAP2A	1	affinity chromatography technology, affinity chromatography technology	Steunou AL (2012), Steunou AL (2012)	2
HMG20A	0	PHLDB3	1	affinity chromatography technology	Boldt K (2016)	1
PPP2CA	7	PPP2R1A	8	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, bioid, bioid	Goudreault M (2009), Goudreault M (2009), Zhou J (2003), Zhou J (2003), Glatter T (2009), Glatter T (2009), Sablina AA (2007), Sablina AA (2007), Kong M (2009), Kong M (2009), Shamay M (2012), Havugimana PC (2012), Junttila MR (2007), Junttila MR (2007), Nazarenko I (2007), Kristensen AR (2012), Fogeron ML (2013), Sablina AA (2010), Lee CW (2014), Wan C (2015), Hein MY (2015), Hein MY (2015), Cianfanelli V (2015), St-Denis N (2016), Bryant JC (1999), Shouse GP (2011), Yadav L (2017), Yadav L (2017), Yadav L (2017), Yadav L (2017)	30
PCGF6	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Hauri S (2016)	2
MORF4L1	1	HNRNPU	12	affinity chromatography technology	Hayakawa T (2007)	1
DNMT3L	2	SMAD3	1	pull down	Pacaud R (2014)	1
TUFT1	1	GRIPAP1	0	affinity chromatography technology	Boldt K (2016)	1
MAX	0	L3MBTL2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Li X (2015), Cheng J (2017), Hauri S (2016), Hauri S (2016)	4
MAX	0	PPP2R1B	4	affinity chromatography technology	Cheng J (2017)	1
YEATS4	0	MYC	2	pull down, affinity chromatography technology, affinity chromatography technology	Piccinni E (2011), Huttlin EL (2015), Huttlin EL (2017)	3
WDR5	2	MGA	9	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	3
MAX	0	ARL6IP5	0	biochemical	Havugimana PC (2012)	1
RNF2	1	WDR5	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	5
PPP1CA	3	SKP1	0	affinity chromatography technology	Flores-Delgado G (2007)	1
PPP2CB	1	PKN3	4	affinity chromatography technology	Hein MY (2015)	1
KDM5C	9	E2F6	2	affinity chromatography technology, affinity chromatography technology	Tahiliani M (2007), Hein MY (2015)	2
CBX3	1	MGA	9	two hybrid, affinity chromatography technology, affinity chromatography technology	Bandyopadhyay S (2010), Vermeulen M (2010), Hauri S (2016)	3
TFPT	0	ACTL6A	4	affinity chromatography technology	Cai Y (2007)	1
HAUS6	5	VPS50	3	affinity chromatography technology	Boldt K (2016)	1
EPC1	2	MEAF6	0	affinity chromatography technology, affinity chromatography technology	Jacquet K (2016), Huttlin EL (2017)	2
MAX	0	MAX	0	pull down, x-ray crystallography, affinity chromatography technology, affinity chromatography technology, pull down, genetic interference	Nair SK (2003), Brownlie P (1997), Faiola F (2007), Kim J (2010), Dear TN (1997), Horlbeck MA (2018)	6
HAUS6	5	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
MAX	0	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
MAX	0	YEATS4	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Li X (2015), Boldt K (2016), Cheng J (2017)	3
RABGAP1L	4	KDM1A	2	affinity chromatography technology	Boldt K (2016)	1
RNF2	1	XPO1	8	affinity chromatography technology	Cao Q (2014)	1
VPS53	4	GRIPAP1	0	affinity chromatography technology	Boldt K (2016)	1
HAUS6	5	CAVIN1	0	affinity chromatography technology	Boldt K (2016)	1
NCKAP5L	4	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
EP400	19	PPP2R1A	8	affinity chromatography technology	Cheng J (2017)	1
RNF2	1	POU5F1	0	affinity chromatography technology, affinity chromatography technology	Endoh M (2008), Endoh M (2008)	2
MXD1	2	E2F6	2	affinity chromatography technology	Cheng J (2017)	1
COPS5	0	SMAD4	9	two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology	Wan M (2002), Wan M (2002), Wan M (2002), Wan M (2002), Kim BC (2004), Huang J (2007), Sangadala S (2013), Lee CC (2016), Lee CC (2016)	9
FOXR2	0	EPC1	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
HDAC2	1	SIN3A	13	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Zhang Y (2003), Fleischer TC (2003), Fleischer TC (2003), Hakimi MA (2003), Yang L (2003), Laherty CD (1997), Zhang Y (2002), Tong JK (1998), Zhang Y (2005), Nakamura T (2002), Sekhavat A (2007), Zou J (2004), Sun JM (2007), Xue Y (1998), Tsai SC (2002), Brandl A (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hsu DS (2014)	20
EP400	19	VPS72	2	affinity chromatography technology, affinity chromatography technology	Cheng J (2017), Cheng J (2017)	2
MYCN	2	ZBTB17	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Akter J (2011), Akter J (2011), Iraci N (2011), Iraci N (2011)	4
COPS5	0	WDR5	2	affinity chromatography technology	Bennett EJ (2010)	1
PPP2CA	7	PKN3	4	affinity chromatography technology	Hein MY (2015)	1
MYCL	0	MORF4L1	1	affinity chromatography technology	Huttlin EL (2017)	1
FBXW7	2	MORF4L2	0	affinity chromatography technology	Kourtis N (2015)	1
MXD3	1	SAP130	2	affinity chromatography technology	Huttlin EL (2017)	1
PPP1CB	9	MAX	0	affinity chromatography technology	Flores-Delgado G (2007)	1
NUF2	1	PSMD9	0	affinity chromatography technology	Boldt K (2016)	1
EPC1	2	BRD8	3	affinity chromatography technology, affinity chromatography technology	Jacquet K (2016), Jacquet K (2016)	2
DNMT3L	2	E2F6	2	pull down	Pacaud R (2014)	1
ING3	3	RUVBL1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Doyon Y (2006), Doyon Y (2004), Hein MY (2015), Huttlin EL (2017)	5
USF1	0	EP300	36	affinity chromatography technology	Crusselle-Davis VJ (2007)	1
L3MBTL2	1	SPRR1B	0	affinity chromatography technology	Hauri S (2016)	1
MAX	0	CLIP2	10	two hybrid	Bandyopadhyay S (2010)	1
XPO1	8	CSTF2	2	biochemical	Wan C (2015)	1
MXD1	2	CBX3	1	affinity chromatography technology	Cheng J (2017)	1
MAX	0	DZIP3	6	affinity chromatography technology	Boldt K (2016)	1
CEBPA	0	HDAC2	1	affinity chromatography technology	Duan H (2005)	1
DMAP1	2	ACTL6A	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2004), Doyon Y (2004), Cheng J (2017)	3