PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000441508	[[73471457, 73476099], [73479383, 73479578]]	[[73475692, 73476094]]
ENST00000398786	[[73471466, 73476099], [73497484, 73497581]]	[[73475692, 73476094]]
NM_001164375	[[73471457, 73476099], [73479383, 73479578]]	[[73475692, 73476094]]
NM_001168390	[[73471457, 73476099], [73497484, 73497581]]	[[73475692, 73476094]]

Promoter

Chrom	Start	End	Description
chr10	73479489	73479508	CAGE_peak_2_at_C10orf105_5end
chr10	73479518	73479527	CAGE_peak_5_at_C10orf105_5end
chr10	73479529	73479541	CAGE_peak_1_at_C10orf105_5end
chr10	73479546	73479553	CAGE_peak_4_at_C10orf105_5end
chr10	73479737	73479747	CAGE_peak_3_at_C10orf105_5end
chr10	73497583	73497595	CAGE_peak_6_at_C10orf105_5end
chr10	73497602	73497612	CAGE_peak_7_at_C10orf105_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I071984	71984202	71988175	1.56	[{'connected_gene': 'SPOCK2', 'score': 11.58}, {'connected_gene': 'CHST3', 'score': 9.49}, {'connected_gene': 'C10orf105', 'score': 2.61}, {'connected_gene': 'ENSG00000272988', 'score': 0.2}]
chr10	GH10I071962	71962503	71967275	2.39	[{'connected_gene': 'CHST3', 'score': 553.07}, {'connected_gene': 'DNAJB12', 'score': 20.02}, {'connected_gene': 'C10orf105', 'score': 4.19}, {'connected_gene': 'ENSG00000272988', 'score': 0.17}]
chr10	GH10I071844	71844912	71852977	2.55	[{'connected_gene': 'PSAP', 'score': 562.41}, {'connected_gene': 'VSIR', 'score': 12.85}, {'connected_gene': 'C10orf105', 'score': 10.32}, {'connected_gene': 'ANAPC16', 'score': 4.56}, {'connected_gene': 'MICU1', 'score': 4.46}, {'connected_gene': 'DDIT4', 'score': 1.3}, {'connected_gene': 'RNU7-38P', 'score': 0.77}]
chr10	GH10I071828	71828569	71832900	0.9	[{'connected_gene': 'PSAP', 'score': 11.72}, {'connected_gene': 'VSIR', 'score': 11.41}, {'connected_gene': 'C10orf105', 'score': 10.85}, {'connected_gene': 'GC10M071845', 'score': 0.39}, {'connected_gene': 'PIR48719', 'score': 0.39}, {'connected_gene': 'GC10M071820', 'score': 0.39}]
chr10	GH10I071873	71873501	71875153	1.28	[{'connected_gene': 'PSAP', 'score': 12.31}, {'connected_gene': 'RNU7-38P', 'score': 12.08}, {'connected_gene': 'C10orf105', 'score': 10.27}, {'connected_gene': 'ENSG00000230526', 'score': 0.77}]
chr10	GH10I071740	71739801	71744256	1.03	[{'connected_gene': 'VSIR', 'score': 18.01}, {'connected_gene': 'PSAP', 'score': 10.35}, {'connected_gene': 'DNAJB12', 'score': 4.47}, {'connected_gene': 'C10orf105', 'score': 0.77}, {'connected_gene': 'CDH23', 'score': 0.05}]
chr10	GH10I071762	71762917	71777063	2.57	[{'connected_gene': 'VSIR', 'score': 603.63}, {'connected_gene': 'CDH23', 'score': 21.19}, {'connected_gene': 'C10orf105', 'score': 19.2}, {'connected_gene': 'PSAP', 'score': 2.29}, {'connected_gene': 'SPOCK2', 'score': 1.45}]
chr10	GH10I071725	71725201	71729839	1.6	[{'connected_gene': 'VSIR', 'score': 45.65}, {'connected_gene': 'CDH23', 'score': 11.09}, {'connected_gene': 'C10orf105', 'score': 4.95}, {'connected_gene': 'PSAP', 'score': 1.24}, {'connected_gene': 'GC10P071695', 'score': 0.29}]
chr10	GH10I071722	71722949	71723982	0.2	[{'connected_gene': 'VSIR', 'score': 11.91}, {'connected_gene': 'SLC29A3', 'score': 9.88}, {'connected_gene': 'CDH23', 'score': 5.71}, {'connected_gene': 'C10orf105', 'score': 0.39}, {'connected_gene': 'GC10P071695', 'score': 0.31}]
chr10	GH10I071833	71833354	71835199	0.46	[{'connected_gene': 'VSIR', 'score': 11.39}, {'connected_gene': 'C10orf105', 'score': 10.85}, {'connected_gene': 'GC10M071845', 'score': 0.39}, {'connected_gene': 'PSAP', 'score': 0.37}, {'connected_gene': 'PIR48719', 'score': 0.37}, {'connected_gene': 'GC10M071820', 'score': 0.37}]
chr10	GH10I071834	71833084	71833233	0.69	[{'connected_gene': 'VSIR', 'score': 11.41}, {'connected_gene': 'C10orf105', 'score': 10.85}, {'connected_gene': 'GC10M071845', 'score': 0.39}, {'connected_gene': 'PIR48719', 'score': 0.39}, {'connected_gene': 'GC10M071820', 'score': 0.39}, {'connected_gene': 'PSAP', 'score': 0.37}]
chr10	GH10I071730	71730120	71731419	0.69	[{'connected_gene': 'VSIR', 'score': 11.02}, {'connected_gene': 'C10orf105', 'score': 0.44}, {'connected_gene': 'GC10P071695', 'score': 0.28}, {'connected_gene': 'CDH23', 'score': 0.06}]
chr10	GH10I071719	71719000	71719601	0.71	[{'connected_gene': 'VSIR', 'score': 11.94}, {'connected_gene': 'C10orf105', 'score': 0.37}, {'connected_gene': 'GC10P071695', 'score': 0.34}, {'connected_gene': 'CDH23', 'score': 0.05}]
chr10	GH10I071597	71597136	71599453	1.42	[{'connected_gene': 'CDH23', 'score': 11.04}, {'connected_gene': 'PSAP', 'score': 11.0}, {'connected_gene': 'CDH23-AS1', 'score': 10.96}, {'connected_gene': 'C10orf105', 'score': 3.77}, {'connected_gene': 'VSIR', 'score': 1.44}, {'connected_gene': 'LOC105378355', 'score': 0.26}, {'connected_gene': 'GC10P071695', 'score': 0.15}]
chr10	GH10I071578	71578687	71594269	0.88	[{'connected_gene': 'CDH23', 'score': 17.06}, {'connected_gene': 'CDH23-AS1', 'score': 11.05}, {'connected_gene': 'SLC29A3', 'score': 10.88}, {'connected_gene': 'C10orf105', 'score': 9.97}, {'connected_gene': 'LOC105378355', 'score': 0.29}, {'connected_gene': 'GC10P071695', 'score': 0.14}]
chr10	GH10I071712	71711808	71718741	1.43	[{'connected_gene': 'DNAJB12', 'score': 27.79}, {'connected_gene': 'VSIR', 'score': 16.85}, {'connected_gene': 'CDH23', 'score': 4.83}, {'connected_gene': 'GC10P071695', 'score': 0.37}, {'connected_gene': 'C10orf105', 'score': 0.34}]
chr10	GH10I071745	71745142	71759809	1.64	[{'connected_gene': 'DNAJB12', 'score': 15.7}, {'connected_gene': 'VSIR', 'score': 15.51}, {'connected_gene': 'CDH23', 'score': 8.36}, {'connected_gene': 'C10orf105', 'score': 5.13}]
chr10	GH10I071651	71651845	71652696	0.2	[{'connected_gene': 'C10orf105', 'score': 10.74}, {'connected_gene': 'PSAP', 'score': 6.78}, {'connected_gene': 'GC10P071695', 'score': 0.26}, {'connected_gene': 'LOC105378355', 'score': 0.15}, {'connected_gene': 'CDH23', 'score': 0.07}]
chr10	GH10I071739	71739444	71739593	0.4	[{'connected_gene': 'C10orf105', 'score': 550.77}, {'connected_gene': 'VSIR', 'score': 11.16}, {'connected_gene': 'PSAP', 'score': 10.34}, {'connected_gene': 'CDH23', 'score': 0.05}]
chr10	GH10I071734	71734651	71738713	1.64	[{'connected_gene': 'C10orf105', 'score': 550.77}, {'connected_gene': 'VSIR', 'score': 11.14}, {'connected_gene': 'PSAP', 'score': 10.34}, {'connected_gene': 'CDH23', 'score': 5.76}, {'connected_gene': 'GC10P071695', 'score': 0.26}]
chr10	GH10I071720	71719724	71719873	1.26	[{'connected_gene': 'C10orf105', 'score': 550.37}, {'connected_gene': 'VSIR', 'score': 11.94}, {'connected_gene': 'GC10P071695', 'score': 0.34}, {'connected_gene': 'CDH23', 'score': 0.05}]
chr10	GH10I071710	71710400	71710601	0.4	[{'connected_gene': 'C10orf105', 'score': 12.8}, {'connected_gene': 'VSIR', 'score': 11.65}, {'connected_gene': 'GC10P071695', 'score': 0.37}, {'connected_gene': 'CDH23', 'score': 0.06}]
chr10	GH10I071721	71719904	71720093	1.26	[{'connected_gene': 'C10orf105', 'score': 550.37}, {'connected_gene': 'VSIR', 'score': 11.94}, {'connected_gene': 'GC10P071695', 'score': 0.34}, {'connected_gene': 'CDH23', 'score': 0.05}]
chr10	GH10I071711	71711201	71711400	0.77	[{'connected_gene': 'C10orf105', 'score': 12.8}, {'connected_gene': 'VSIR', 'score': 11.65}, {'connected_gene': 'GC10P071695', 'score': 0.37}, {'connected_gene': 'CDH23', 'score': 0.06}]
chr10	GH10I071761	71761264	71761413	0.72	[{'connected_gene': 'C10orf105', 'score': 12.44}, {'connected_gene': 'VSIR', 'score': 0.39}, {'connected_gene': 'CDH23', 'score': 0.05}]
chr10	GH10I071709	71709244	71709313	0.63	[{'connected_gene': 'C10orf105', 'score': 12.8}, {'connected_gene': 'VSIR', 'score': 11.65}, {'connected_gene': 'GC10P071695', 'score': 0.39}, {'connected_gene': 'CDH23', 'score': 0.06}]
chr10	GH10I071760	71760505	71760797	0.4	[{'connected_gene': 'C10orf105', 'score': 12.44}, {'connected_gene': 'VSIR', 'score': 0.39}, {'connected_gene': 'CDH23', 'score': 0.05}]
chr10	GH10I071698	71698083	71699033	0.99	[{'connected_gene': 'C10orf105', 'score': 12.17}, {'connected_gene': 'VSIR', 'score': 11.21}, {'connected_gene': 'SLC29A3', 'score': 11.13}, {'connected_gene': 'GC10P071695', 'score': 0.77}, {'connected_gene': 'CDH23', 'score': 0.06}]
chr10	GH10I071707	71707968	71708800	1.15	[{'connected_gene': 'C10orf105', 'score': 12.76}, {'connected_gene': 'VSIR', 'score': 11.71}, {'connected_gene': 'SLC29A3', 'score': 10.87}, {'connected_gene': 'GC10P071695', 'score': 0.39}, {'connected_gene': 'CDH23', 'score': 0.06}]
chr10	GH10I071688	71688973	71689809	0.31	[{'connected_gene': 'C10orf105', 'score': 11.51}, {'connected_gene': 'VSIR', 'score': 10.97}, {'connected_gene': 'CDH23-AS1', 'score': 10.29}, {'connected_gene': 'GC10P071695', 'score': 0.44}, {'connected_gene': 'LOC105378355', 'score': 0.12}, {'connected_gene': 'CDH23', 'score': 0.06}]
chr10	GH10I071731	71731702	71732155	0.4	[{'connected_gene': 'C10orf105', 'score': 0.44}, {'connected_gene': 'GC10P071695', 'score': 0.28}, {'connected_gene': 'CDH23', 'score': 0.06}]
chr10	GH10I071701	71701401	71701600	0.58	[{'connected_gene': 'C10orf105', 'score': 12.17}, {'connected_gene': 'SLC29A3', 'score': 11.13}, {'connected_gene': 'VSIR', 'score': 11.12}, {'connected_gene': 'GC10P071695', 'score': 0.44}, {'connected_gene': 'CDH23', 'score': 0.06}]
chr10	GH10I071338	71338429	71345834	1.44	[{'connected_gene': 'C10orf105', 'score': 13.04}, {'connected_gene': 'SLC29A3', 'score': 12.06}, {'connected_gene': 'CDH23', 'score': 11.14}, {'connected_gene': 'CEP57L1P1', 'score': 5.37}, {'connected_gene': 'LOC105378353', 'score': 0.44}]
chr10	GH10I072134	72134673	72136006	0.49	[{'connected_gene': 'C10orf105', 'score': 13.04}, {'connected_gene': 'ANAPC16', 'score': 11.81}, {'connected_gene': 'ASCC1', 'score': 11.81}, {'connected_gene': 'ENSG00000200170', 'score': 11.8}, {'connected_gene': 'ENSG00000200294', 'score': 11.39}, {'connected_gene': 'RPL15P14', 'score': 7.14}, {'connected_gene': 'SPOCK2', 'score': 0.25}, {'connected_gene': 'GC10P072226', 'score': 0.25}]
chr10	GH10I071231	71231860	71237179	1.57	[{'connected_gene': 'UNC5B', 'score': 37.82}, {'connected_gene': 'UNC5B-AS1', 'score': 12.44}, {'connected_gene': 'PCBD1', 'score': 10.2}, {'connected_gene': 'SLC29A3', 'score': 9.75}, {'connected_gene': 'C10orf105', 'score': 2.25}, {'connected_gene': 'PIR59347', 'score': 0.77}]
chr10	GH10I072637	72637078	72638241	1.16	[{'connected_gene': 'HMGN2P34', 'score': 550.77}, {'connected_gene': 'C10orf105', 'score': 13.02}, {'connected_gene': 'DNAJB12', 'score': 11.63}, {'connected_gene': 'ENSG00000230526', 'score': 9.71}, {'connected_gene': 'ENSG00000238215', 'score': 0.44}]
chr10	GH10I071696	71696401	71697159	1.16	[{'connected_gene': 'GC10P071695', 'score': 550.77}, {'connected_gene': 'VSIR', 'score': 11.69}, {'connected_gene': 'SLC29A3', 'score': 10.68}, {'connected_gene': 'C10orf105', 'score': 0.26}, {'connected_gene': 'CDH23', 'score': 0.06}]
chr10	GH10I071692	71692869	71696200	1.31	[{'connected_gene': 'GC10P071695', 'score': 550.77}, {'connected_gene': 'VSIR', 'score': 11.69}, {'connected_gene': 'C10orf105', 'score': 11.52}, {'connected_gene': 'SLC29A3', 'score': 10.68}, {'connected_gene': 'CDH23-AS1', 'score': 10.28}, {'connected_gene': 'LOC105378355', 'score': 0.11}, {'connected_gene': 'CDH23', 'score': 0.06}]
chr10	GH10I072226	72226755	72227123	0.53	[{'connected_gene': 'ENSG00000200294', 'score': 10.87}, {'connected_gene': 'CDH23', 'score': 4.29}, {'connected_gene': 'C10orf105', 'score': 1.8}, {'connected_gene': 'VSIR', 'score': 1.29}, {'connected_gene': 'ENSG00000200170', 'score': 0.44}, {'connected_gene': 'ANAPC16', 'score': 0.39}, {'connected_gene': 'GC10M072248', 'score': 0.34}]