PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000362307	[[21512113, 21512184]]	None
NR_029505	[[21512113, 21512184]]	None

Promoter

Chrom	Start	End	Description
chr9	21512111	21512115	CAGE_peak_1_at_MIR31_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I021573	21573873	21593957	1.56	[{'connected_gene': 'FOCAD', 'score': 11.18}, {'connected_gene': 'MIR31', 'score': 10.42}, {'connected_gene': 'IFNW1', 'score': 3.81}, {'connected_gene': 'IFNA1', 'score': 1.86}, {'connected_gene': 'IFNA6', 'score': 1.63}, {'connected_gene': 'MIR31HG', 'score': 0.34}, {'connected_gene': 'ENSG00000227443', 'score': 0.23}]
chr9	GH09I021787	21787737	21790318	1.19	[{'connected_gene': 'MTAP', 'score': 21.18}, {'connected_gene': 'MIR31', 'score': 10.11}, {'connected_gene': 'RN7SL151P', 'score': 0.17}]
chr9	GH09I021707	21707922	21709554	0.99	[{'connected_gene': 'MTAP', 'score': 15.18}, {'connected_gene': 'IFNA13', 'score': 9.87}, {'connected_gene': 'MIR31', 'score': 9.66}, {'connected_gene': 'IFNA6', 'score': 1.45}, {'connected_gene': 'IFNA1', 'score': 1.29}, {'connected_gene': 'RN7SL151P', 'score': 0.44}]
chr9	GH09I021710	21710251	21712238	0.58	[{'connected_gene': 'MTAP', 'score': 11.37}, {'connected_gene': 'IFNA13', 'score': 9.86}, {'connected_gene': 'MIR31', 'score': 9.66}, {'connected_gene': 'RN7SL151P', 'score': 0.39}]
chr9	GH09I021596	21596754	21597910	0.2	[{'connected_gene': 'MIR31', 'score': 10.26}, {'connected_gene': 'MIR31HG', 'score': 0.28}, {'connected_gene': 'ENSG00000227443', 'score': 0.26}]
chr9	GH09I021610	21610595	21612820	0.71	[{'connected_gene': 'MIR31', 'score': 10.41}, {'connected_gene': 'ENSG00000227443', 'score': 0.31}, {'connected_gene': 'MIR31HG', 'score': 0.23}]
chr9	GH09I021605	21605356	21606331	1.27	[{'connected_gene': 'MIR31', 'score': 10.09}, {'connected_gene': 'ENSG00000227443', 'score': 0.29}, {'connected_gene': 'MIR31HG', 'score': 0.25}]
chr9	GH09I021595	21595660	21595810	0.42	[{'connected_gene': 'MIR31', 'score': 10.27}, {'connected_gene': 'MIR31HG', 'score': 0.28}, {'connected_gene': 'ENSG00000227443', 'score': 0.26}]
chr9	GH09I021535	21535491	21536779	0.2	[{'connected_gene': 'MIR31', 'score': 11.68}, {'connected_gene': 'GC09M021524', 'score': 0.39}, {'connected_gene': 'MIR31HG', 'score': 0.34}]
chr9	GH09I021674	21674146	21691044	1.53	[{'connected_gene': 'MIR31', 'score': 9.98}, {'connected_gene': 'MTAP', 'score': 8.64}, {'connected_gene': 'CDKN2A', 'score': 5.99}, {'connected_gene': 'KHSRPP1', 'score': 0.39}, {'connected_gene': 'ENSG00000227443', 'score': 0.26}]
chr9	GH09I021672	21672882	21673031	0.4	[{'connected_gene': 'MIR31', 'score': 9.71}, {'connected_gene': 'KHSRPP1', 'score': 0.34}, {'connected_gene': 'ENSG00000227443', 'score': 0.29}]
chr9	GH09I021562	21562617	21573541	0.96	[{'connected_gene': 'MIR31', 'score': 10.25}, {'connected_gene': 'IFNA13', 'score': 10.05}, {'connected_gene': 'MIR31HG', 'score': 0.44}, {'connected_gene': 'ENSG00000227443', 'score': 0.19}]
chr9	GH09I021547	21547672	21562295	1.79	[{'connected_gene': 'MIR31', 'score': 11.04}, {'connected_gene': 'IFNE', 'score': 4.58}, {'connected_gene': 'MIR31HG', 'score': 0.77}, {'connected_gene': 'GC09M021524', 'score': 0.29}]
chr9	GH09I021545	21545128	21546256	0.2	[{'connected_gene': 'MIR31', 'score': 10.53}, {'connected_gene': 'IFNE', 'score': 5.03}, {'connected_gene': 'MIR31HG', 'score': 0.39}, {'connected_gene': 'GC09M021524', 'score': 0.34}]
chr9	GH09I021542	21542609	21544118	0.51	[{'connected_gene': 'MIR31', 'score': 11.63}, {'connected_gene': 'IFNE', 'score': 4.93}, {'connected_gene': 'MIR31HG', 'score': 0.37}, {'connected_gene': 'GC09M021524', 'score': 0.37}]
chr9	GH09I021667	21667999	21669120	0.2	[{'connected_gene': 'IFNA13', 'score': 10.12}, {'connected_gene': 'MIR31', 'score': 9.83}, {'connected_gene': 'KHSRPP1', 'score': 0.31}, {'connected_gene': 'ENSG00000227443', 'score': 0.29}]
chr9	GH09I021709	21709582	21709771	0.72	[{'connected_gene': 'IFNA13', 'score': 9.86}, {'connected_gene': 'MIR31', 'score': 9.66}, {'connected_gene': 'RN7SL151P', 'score': 0.39}, {'connected_gene': 'MTAP', 'score': 0.16}]
chr9	GH09I021268	21268001	21268400	0.52	[{'connected_gene': 'IFNA5', 'score': 11.49}, {'connected_gene': 'IFNA12P', 'score': 10.79}, {'connected_gene': 'IFNA8', 'score': 10.78}, {'connected_gene': 'IFNWP2', 'score': 10.78}, {'connected_gene': 'IFNA13', 'score': 10.52}, {'connected_gene': 'MIR31', 'score': 9.04}, {'connected_gene': 'IFNA22P', 'score': 0.39}, {'connected_gene': 'IFNA14', 'score': 0.31}]
chr9	GH09I021520	21520142	21520291	0.2	[{'connected_gene': 'ENSG00000264379', 'score': 0.77}, {'connected_gene': 'MIR31', 'score': 0.44}, {'connected_gene': 'MIR31HG', 'score': 0.28}]
chr9	GH09I021521	21521582	21521711	0.2	[{'connected_gene': 'ENSG00000264379', 'score': 0.77}, {'connected_gene': 'MIR31', 'score': 0.44}, {'connected_gene': 'MIR31HG', 'score': 0.28}]
chr9	GH09I021523	21523202	21523291	0.2	[{'connected_gene': 'ENSG00000264379', 'score': 550.77}, {'connected_gene': 'GC09M021524', 'score': 550.77}, {'connected_gene': 'MIR31', 'score': 0.39}, {'connected_gene': 'MIR31HG', 'score': 0.28}]
chr9	GH09I021513	21513582	21513731	0.2	[{'connected_gene': 'GC09P021512', 'score': 550.77}, {'connected_gene': 'MIR31', 'score': 550.77}, {'connected_gene': 'ENSG00000264379', 'score': 0.39}, {'connected_gene': 'MIR31HG', 'score': 0.25}]
chr9	GH09I021522	21521022	21521171	0.31	[{'connected_gene': 'ENSG00000264379', 'score': 0.77}, {'connected_gene': 'MIR31', 'score': 0.44}, {'connected_gene': 'MIR31HG', 'score': 0.28}]