PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000385289	[[172113674, 172113784]]	None
NR_029618	[[172113674, 172113784]]	None

Promoter

Chrom	Start	End	Description
chr1	172113686	172113715	CAGE_peak_2_at_MIR199A2_5end
chr1	172113738	172113778	CAGE_peak_1_at_MIR199A2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I172137	172137800	172147430	1.74	[{'connected_gene': 'RNU6-157P', 'score': 9.84}, {'connected_gene': 'MIR214', 'score': 0.77}, {'connected_gene': 'DNM3OS', 'score': 0.77}, {'connected_gene': 'MIR199A2', 'score': 0.77}, {'connected_gene': 'MIR3120', 'score': 0.77}, {'connected_gene': 'DNM3', 'score': 0.06}]
chr1	GH01I172108	172108740	172110436	0.49	[{'connected_gene': 'DNM3OS', 'score': 11.52}, {'connected_gene': 'MIR199A2', 'score': 11.52}, {'connected_gene': 'GC01P172124', 'score': 0.37}, {'connected_gene': 'GC01M171926', 'score': 0.17}, {'connected_gene': 'DNM3', 'score': 0.06}]
chr1	GH01I172179	172179677	172187698	1.4	[{'connected_gene': 'DNM3OS', 'score': 11.71}, {'connected_gene': 'MIR199A2', 'score': 11.71}, {'connected_gene': 'RNU6-157P', 'score': 11.14}, {'connected_gene': 'GC01P172160', 'score': 0.34}, {'connected_gene': 'GC01P172209', 'score': 0.31}, {'connected_gene': 'DNM3', 'score': 0.05}]
chr1	GH01I172210	172210061	172212728	0.2	[{'connected_gene': 'GC01P172209', 'score': 550.77}, {'connected_gene': 'DNM3OS', 'score': 10.61}, {'connected_gene': 'MIR199A2', 'score': 10.61}, {'connected_gene': 'GC01P172216', 'score': 0.44}, {'connected_gene': 'DNM3', 'score': 0.05}]