Visualization of regulatory element with DNMs in transcripts



Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.

Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000384893 [[35785967, 35786051]] None
NR_029824 [[35785967, 35786051]] None
Promoter
Chrom Start End Description
chr3 35786039 35786054 CAGE_peak_1_at_MIR128-2_5end

Enhancer
Chrom Start End Genehancer ID Score Attributes
chr3 GH03I035695 35695089 35696716 0.2 [{'connected_gene': 'MIR128-2', 'score': 10.92}, {'connected_gene': 'ARPP21', 'score': 4.54}, {'connected_gene': 'ARPP21-AS1', 'score': 0.26}, {'connected_gene': 'GC03P035745', 'score': 0.25}]
chr3 GH03I035492 35492449 35493502 0.31 [{'connected_gene': 'MIR128-2', 'score': 10.7}, {'connected_gene': 'GC03P035521', 'score': 0.31}, {'connected_gene': 'LOC101928135', 'score': 0.15}]
chr3 GH03I035707 35707848 35709477 0.49 [{'connected_gene': 'MIR128-2', 'score': 11.4}, {'connected_gene': 'GC03P035745', 'score': 0.28}, {'connected_gene': 'ARPP21-AS1', 'score': 0.22}, {'connected_gene': 'ARPP21', 'score': 0.2}]
chr3 GH03I035687 35687474 35688598 0.38 [{'connected_gene': 'MIR128-2', 'score': 10.7}, {'connected_gene': 'ARPP21-AS1', 'score': 0.28}, {'connected_gene': 'ARPP21', 'score': 0.25}, {'connected_gene': 'GC03P035745', 'score': 0.22}]
chr3 GH03I035634 35634645 35637347 0.2 [{'connected_gene': 'ARPP21', 'score': 11.44}, {'connected_gene': 'MIR128-2', 'score': 10.09}, {'connected_gene': 'GC03P035527', 'score': 0.14}]
chr3 GH03I035680 35680891 35680950 0.7 [{'connected_gene': 'ARPP21', 'score': 550.26}, {'connected_gene': 'ARPP21-AS1', 'score': 11.53}, {'connected_gene': 'MIR128-2', 'score': 10.35}, {'connected_gene': 'GC03P035745', 'score': 0.21}]
chr3 GH03I035676 35676976 35680741 1.21 [{'connected_gene': 'ARPP21', 'score': 571.45}, {'connected_gene': 'ARPP21-AS1', 'score': 11.53}, {'connected_gene': 'MIR128-2', 'score': 10.34}, {'connected_gene': 'GC03P035745', 'score': 0.2}]
chr3 GH03I035685 35685894 35686747 0.2 [{'connected_gene': 'ARPP21-AS1', 'score': 11.51}, {'connected_gene': 'MIR128-2', 'score': 10.7}, {'connected_gene': 'ARPP21', 'score': 0.25}, {'connected_gene': 'GC03P035745', 'score': 0.22}]
chr3 GH03I035684 35684432 35685846 0.2 [{'connected_gene': 'ARPP21-AS1', 'score': 11.51}, {'connected_gene': 'MIR128-2', 'score': 10.36}, {'connected_gene': 'ARPP21', 'score': 9.67}, {'connected_gene': 'GC03P035745', 'score': 0.22}]