PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000539001	[[167559901, 167560143], [167562877, 167562972], [167577888, 167578048], [167578696, 167578796]]	None
ENST00000486697	[[167562967, 167562972], [167563444, 167563561], [167577888, 167578048], [167585631, 167585765]]	[[167585632, 167585765]]
ENST00000366832	[[167584080, 167584210], [167585631, 167585776], [167587240, 167587456], [167590484, 167590622], [167591871, 167592030], [167592498, 167592610], [167594120, 167594221], [167595212, 167596396]]	[[167585632, 167585776], [167587240, 167587456], [167590484, 167590622], [167591871, 167592030], [167592498, 167592610], [167594120, 167594221], [167595212, 167595404]]
ENST00000283507	[[167584135, 167584210], [167585631, 167585776], [167587240, 167587456], [167590484, 167590622], [167591871, 167592030], [167592498, 167592610], [167594120, 167594221], [167608864, 167608982], [167609977, 167610401]]	[[167585632, 167585776], [167587240, 167587456], [167590484, 167590622], [167591871, 167592030], [167592498, 167592610], [167594120, 167594221], [167608864, 167608918]]
ENST00000382669	[[167584145, 167584210], [167585631, 167586297]]	None
ENST00000464222	[[167584158, 167584210], [167590484, 167590622], [167591871, 167592248]]	None
ENST00000473271	[[167607115, 167607267], [167608864, 167608982], [167609977, 167610393]]	None
NM_001145121	[[167584080, 167584210], [167585631, 167585776], [167587240, 167587456], [167590484, 167590622], [167591871, 167592030], [167592498, 167592610], [167594120, 167594221], [167595212, 167596396]]	[[167585632, 167585776], [167587240, 167587456], [167590484, 167590622], [167591871, 167592030], [167592498, 167592610], [167594120, 167594221], [167595212, 167595404]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I167127	167127668	167128426	0.74	[{'connected_gene': 'RNASET2', 'score': 21.22}, {'connected_gene': 'ENSG00000249141', 'score': 10.6}, {'connected_gene': 'LOC105378122', 'score': 0.44}, {'connected_gene': 'TCP10L2', 'score': 0.37}, {'connected_gene': 'CCR6', 'score': 0.37}, {'connected_gene': 'LOC105378124', 'score': 0.37}, {'connected_gene': 'ENSG00000272980', 'score': 0.13}]
chr6	GH06I167124	167124673	167124822	0.69	[{'connected_gene': 'RNASET2', 'score': 10.61}, {'connected_gene': 'ENSG00000249141', 'score': 10.61}, {'connected_gene': 'LOC105378122', 'score': 0.77}, {'connected_gene': 'CCR6', 'score': 0.39}, {'connected_gene': 'TCP10L2', 'score': 0.34}, {'connected_gene': 'LOC105378124', 'score': 0.34}, {'connected_gene': 'ENSG00000272980', 'score': 0.13}]
chr6	GH06I167126	167126153	167126874	0.2	[{'connected_gene': 'RNASET2', 'score': 20.89}, {'connected_gene': 'ENSG00000249141', 'score': 10.6}, {'connected_gene': 'LOC105378122', 'score': 0.77}, {'connected_gene': 'CCR6', 'score': 0.39}, {'connected_gene': 'TCP10L2', 'score': 0.37}, {'connected_gene': 'LOC105378124', 'score': 0.37}, {'connected_gene': 'ENSG00000272980', 'score': 0.13}]
chr6	GH06I167233	167232957	167233883	0.31	[{'connected_gene': 'UNC93A', 'score': 12.81}, {'connected_gene': 'LOC102724220', 'score': 7.84}, {'connected_gene': 'TCP10L2', 'score': 6.09}, {'connected_gene': 'LOC102725048', 'score': 0.44}, {'connected_gene': 'ENSG00000280707', 'score': 0.44}]
chr6	GH06I167146	167146453	167147608	0.69	[{'connected_gene': 'TCP10L2', 'score': 555.88}, {'connected_gene': 'LOC105378124', 'score': 550.77}, {'connected_gene': 'CCR6', 'score': 11.5}, {'connected_gene': 'LOC105378120', 'score': 11.33}, {'connected_gene': 'FGFR1OP', 'score': 11.33}, {'connected_gene': 'RNASET2', 'score': 10.95}, {'connected_gene': 'ENSG00000249141', 'score': 10.95}, {'connected_gene': 'GPR31', 'score': 0.39}]
chr6	GH06I167150	167150820	167154259	1.53	[{'connected_gene': 'GPR31', 'score': 24.6}, {'connected_gene': 'RNASET2', 'score': 13.67}, {'connected_gene': 'CCR6', 'score': 11.49}, {'connected_gene': 'FGFR1OP', 'score': 11.32}, {'connected_gene': 'LOC105378120', 'score': 11.32}, {'connected_gene': 'ENSG00000249141', 'score': 10.95}, {'connected_gene': 'UNC93A', 'score': 10.19}, {'connected_gene': 'RPS6KA2-AS1', 'score': 9.98}, {'connected_gene': 'RPS6KA2', 'score': 9.98}, {'connected_gene': 'AFDN', 'score': 4.46}, {'connected_gene': 'TCP10L2', 'score': 0.44}, {'connected_gene': 'LOC105378124', 'score': 0.44}]
chr6	GH06I167166	167166397	167166548	0.36	[{'connected_gene': 'GPR31', 'score': 15.13}, {'connected_gene': 'RNASET2', 'score': 1.19}, {'connected_gene': 'LOC105378123', 'score': 0.77}, {'connected_gene': 'TCP10L2', 'score': 0.34}, {'connected_gene': 'LOC105378124', 'score': 0.34}]
chr6	GH06I167162	167162447	167164186	0.72	[{'connected_gene': 'GPR31', 'score': 0.77}, {'connected_gene': 'LOC105378123', 'score': 0.44}, {'connected_gene': 'TCP10L2', 'score': 0.37}, {'connected_gene': 'LOC105378124', 'score': 0.37}]
chr6	GH06I167141	167140793	167140942	0.74	[{'connected_gene': 'CCR6', 'score': 11.79}, {'connected_gene': 'LOC105378120', 'score': 11.07}, {'connected_gene': 'FGFR1OP', 'score': 11.07}, {'connected_gene': 'TCP10L2', 'score': 0.44}, {'connected_gene': 'LOC105378124', 'score': 0.44}, {'connected_gene': 'LOC105378122', 'score': 0.37}]
chr6	GH06I167142	167141213	167141362	0.98	[{'connected_gene': 'CCR6', 'score': 11.79}, {'connected_gene': 'LOC105378120', 'score': 11.07}, {'connected_gene': 'FGFR1OP', 'score': 11.07}, {'connected_gene': 'TCP10L2', 'score': 0.44}, {'connected_gene': 'LOC105378124', 'score': 0.44}, {'connected_gene': 'LOC105378122', 'score': 0.37}]
chr6	GH06I167140	167140988	167141200	0.95	[{'connected_gene': 'CCR6', 'score': 11.79}, {'connected_gene': 'LOC105378120', 'score': 11.07}, {'connected_gene': 'FGFR1OP', 'score': 11.07}, {'connected_gene': 'TCP10L2', 'score': 0.44}, {'connected_gene': 'LOC105378124', 'score': 0.44}, {'connected_gene': 'LOC105378122', 'score': 0.37}]
chr6	GH06I167143	167141474	167142942	1.05	[{'connected_gene': 'CCR6', 'score': 11.77}, {'connected_gene': 'LOC105378120', 'score': 11.07}, {'connected_gene': 'FGFR1OP', 'score': 11.07}, {'connected_gene': 'TCP10L2', 'score': 5.85}, {'connected_gene': 'LOC105378124', 'score': 0.77}, {'connected_gene': 'LOC105378122', 'score': 0.37}]
chr6	GH06I167136	167136015	167137132	0.2	[{'connected_gene': 'CCR6', 'score': 11.89}, {'connected_gene': 'LOC105378120', 'score': 11.37}, {'connected_gene': 'FGFR1OP', 'score': 11.37}, {'connected_gene': 'GPR31', 'score': 11.3}, {'connected_gene': 'TCP10L2', 'score': 0.44}, {'connected_gene': 'LOC105378124', 'score': 0.44}, {'connected_gene': 'LOC105378122', 'score': 0.39}, {'connected_gene': 'ENSG00000272980', 'score': 0.12}]
chr6	GH06I167129	167129191	167131911	1.13	[{'connected_gene': 'FGFR1OP', 'score': 11.36}, {'connected_gene': 'LOC105378120', 'score': 11.36}, {'connected_gene': 'GPR31', 'score': 11.25}, {'connected_gene': 'RPS6KA2-AS1', 'score': 9.74}, {'connected_gene': 'RPS6KA2', 'score': 9.74}, {'connected_gene': 'RNASET2', 'score': 9.67}, {'connected_gene': 'LOC105378122', 'score': 0.44}, {'connected_gene': 'TCP10L2', 'score': 0.37}, {'connected_gene': 'CCR6', 'score': 0.37}, {'connected_gene': 'LOC105378124', 'score': 0.37}, {'connected_gene': 'ENSG00000272980', 'score': 0.12}]
chr6	GH06I167170	167170570	167170629	0.5	[{'connected_gene': 'LOC105378123', 'score': 550.77}, {'connected_gene': 'TCP10L2', 'score': 550.34}, {'connected_gene': 'PIR32108', 'score': 0.77}]
chr6	GH06I167167	167167898	167168156	0.29	[{'connected_gene': 'LOC105378123', 'score': 550.77}, {'connected_gene': 'GPR31', 'score': 10.09}, {'connected_gene': 'RNASET2', 'score': 1.53}, {'connected_gene': 'TCP10L2', 'score': 0.34}, {'connected_gene': 'LOC105378124', 'score': 0.34}]