PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000244221	[[71409868, 71415665], [71416974, 71417151], [71429581, 71429730], [71454057, 71454213]]	[[71415608, 71415665], [71416974, 71417151], [71429581, 71429719]]
NM_020459	[[71409867, 71415665], [71416974, 71417151], [71429581, 71429730], [71454057, 71454233]]	[[71415608, 71415665], [71416974, 71417151], [71429581, 71429719]]

Promoter

Chrom	Start	End	Description
chr2	71454167	71454178	CAGE_peak_2_at_PAIP2B_5end
chr2	71454185	71454242	CAGE_peak_1_at_PAIP2B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I071501	71501789	71506744	1.23	[{'connected_gene': 'DYSF', 'score': 17.22}, {'connected_gene': 'ZNF638', 'score': 12.6}, {'connected_gene': 'ENSG00000233870', 'score': 6.63}, {'connected_gene': 'PAIP2B', 'score': 5.07}, {'connected_gene': 'GC02P071578', 'score': 0.19}]
chr2	GH02I071448	71448960	71459242	2.56	[{'connected_gene': 'DYSF', 'score': 585.16}, {'connected_gene': 'ZNF638', 'score': 18.22}, {'connected_gene': 'CLEC4F', 'score': 12.6}, {'connected_gene': 'RNU6-105P', 'score': 10.85}, {'connected_gene': 'TEX261', 'score': 10.62}, {'connected_gene': 'ANKRD53', 'score': 10.11}, {'connected_gene': 'PAIP2B', 'score': 5.87}, {'connected_gene': 'OR7E91P', 'score': 5.01}, {'connected_gene': 'NAGK', 'score': 1.85}, {'connected_gene': 'GC02P071578', 'score': 0.13}]
chr2	GH02I071592	71592284	71592372	0.44	[{'connected_gene': 'PAIP2B', 'score': 2.3}, {'connected_gene': 'DYSF', 'score': 1.59}, {'connected_gene': 'GC02P071578', 'score': 0.39}, {'connected_gene': 'GC02P071827', 'score': 0.07}]
chr2	GH02I070612	70612363	70613336	0.31	[{'connected_gene': 'PAIP2B', 'score': 4.79}, {'connected_gene': 'GC02M070656', 'score': 0.25}, {'connected_gene': 'TGFA', 'score': 0.22}, {'connected_gene': 'ADD2', 'score': 0.1}]
chr2	GH02I070615	70615418	70617005	0.95	[{'connected_gene': 'PAIP2B', 'score': 4.84}, {'connected_gene': 'GC02M070656', 'score': 0.26}, {'connected_gene': 'TGFA', 'score': 0.21}, {'connected_gene': 'ADD2', 'score': 0.1}]
chr2	GH02I071337	71337401	71337600	0.38	[{'connected_gene': 'PAIP2B', 'score': 5.43}, {'connected_gene': 'ENSG00000281195', 'score': 0.28}, {'connected_gene': 'ZNF638', 'score': 0.21}]
chr2	GH02I071183	71183001	71183800	0.2	[{'connected_gene': 'PAIP2B', 'score': 4.8}, {'connected_gene': 'OR7E62P', 'score': 4.64}, {'connected_gene': 'ENSG00000233870', 'score': 0.77}]
chr2	GH02I071226	71226067	71228000	1.97	[{'connected_gene': 'PAIP2B', 'score': 558.91}, {'connected_gene': 'TEX261', 'score': 24.13}, {'connected_gene': 'ANKRD53', 'score': 21.38}, {'connected_gene': 'MPHOSPH10', 'score': 20.7}, {'connected_gene': 'TIA1', 'score': 14.89}, {'connected_gene': 'ZNF638', 'score': 6.15}, {'connected_gene': 'ENSG00000233870', 'score': 0.25}]
chr2	GH02I071235	71235540	71236700	0.49	[{'connected_gene': 'PAIP2B', 'score': 8.25}, {'connected_gene': 'LOC105374797', 'score': 0.26}]
chr2	GH02I071210	71210411	71210560	0.59	[{'connected_gene': 'PAIP2B', 'score': 0.37}, {'connected_gene': 'ENSG00000233870', 'score': 0.29}]
chr2	GH02I071331	71331071	71334301	2.01	[{'connected_gene': 'ZNF638', 'score': 558.05}, {'connected_gene': 'PAIP2B', 'score': 7.8}, {'connected_gene': 'OR7E91P', 'score': 6.48}, {'connected_gene': 'ENSG00000281195', 'score': 0.26}]
chr2	GH02I071416	71416971	71418242	0.74	[{'connected_gene': 'ZNF638', 'score': 19.36}, {'connected_gene': 'RNU6-105P', 'score': 11.69}, {'connected_gene': 'OR7E91P', 'score': 5.77}, {'connected_gene': 'PAIP2B', 'score': 4.92}, {'connected_gene': 'GC02M071380', 'score': 0.28}, {'connected_gene': 'DYSF', 'score': 0.28}]
chr2	GH02I071275	71275920	71278295	1.47	[{'connected_gene': 'ZNF638', 'score': 567.3}, {'connected_gene': 'LOC105374797', 'score': 550.77}, {'connected_gene': 'CLEC4F', 'score': 12.31}, {'connected_gene': 'TEX261', 'score': 11.83}, {'connected_gene': 'CD207', 'score': 10.43}, {'connected_gene': 'PAIP2B', 'score': 7.98}, {'connected_gene': 'OR7E91P', 'score': 5.0}, {'connected_gene': 'ENSG00000281195', 'score': 0.15}]
chr2	GH02I071157	71157001	71157892	0.68	[{'connected_gene': 'LOC101060051', 'score': 550.77}, {'connected_gene': 'PAIP2B', 'score': 5.97}, {'connected_gene': 'GC02P071160', 'score': 0.77}]
chr2	GH02I071378	71378787	71379733	0.67	[{'connected_gene': 'GC02M071380', 'score': 550.77}, {'connected_gene': 'RNU6-105P', 'score': 550.77}, {'connected_gene': 'ZNF638', 'score': 5.63}, {'connected_gene': 'PAIP2B', 'score': 5.42}, {'connected_gene': 'ENSG00000281195', 'score': 0.44}]