PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000371007	[[67557847, 67559287], [67560917, 67561104], [67561934, 67562004], [67581034, 67581147], [67591434, 67591592], [67592848, 67592940], [67596824, 67596910], [67697528, 67697535]]	[[67558687, 67559287], [67560917, 67561104], [67561934, 67562004], [67581034, 67581147], [67591434, 67591592], [67592848, 67592923]]
ENST00000448166	[[67559241, 67559287], [67560917, 67561104], [67561934, 67562004], [67568920, 67569065], [67577259, 67577327], [67581034, 67581147], [67591434, 67591592], [67592848, 67592940], [67596824, 67596910], [67697528, 67697536]]	[[67559241, 67559287], [67560917, 67561104], [67561934, 67562004], [67568920, 67569065], [67577259, 67577327], [67581034, 67581147], [67591434, 67591592], [67592848, 67592923]]
ENST00000371006	[[67557858, 67559287], [67560917, 67561104], [67561934, 67562004], [67581034, 67581147], [67591434, 67591592], [67592848, 67592944]]	[[67558687, 67559287], [67560917, 67561104], [67561934, 67562004], [67581034, 67581147], [67591434, 67591592], [67592848, 67592923]]
ENST00000371004	[[67558077, 67562004], [67591434, 67591592], [67592848, 67592940], [67596824, 67596910], [67600612, 67600653]]	None
ENST00000544837	[[67558634, 67559287], [67560917, 67561104], [67561934, 67562004], [67581034, 67581147], [67591434, 67591592], [67592848, 67592940], [67596824, 67596910], [67600612, 67600639]]	[[67558687, 67559287], [67560917, 67561104], [67561934, 67562004], [67581034, 67581147], [67591434, 67591592], [67592848, 67592923]]
ENST00000603691	[[67561978, 67562004], [67568920, 67569065], [67577259, 67577327], [67581034, 67581147], [67591434, 67591592], [67592848, 67592940], [67596824, 67596910], [67600612, 67600660]]	[[67561978, 67562004], [67568920, 67569065], [67577259, 67577327], [67581034, 67581147], [67591434, 67591592], [67592848, 67592923]]
ENST00000475209	[[67568956, 67569065], [67577259, 67577327], [67579296, 67579439], [67581034, 67581147], [67591434, 67591592], [67592848, 67592940], [67596824, 67596910], [67600612, 67600660]]	[[67579428, 67579439], [67581034, 67581147], [67591434, 67591592], [67592848, 67592923]]
NR_075077	[[67557858, 67559287], [67561934, 67562004], [67568920, 67569065], [67577259, 67577327], [67579296, 67579439], [67581034, 67581147], [67591434, 67591592], [67592848, 67592940], [67596824, 67596910], [67600612, 67600654]]	None
NM_001276352	[[67557858, 67559287], [67561934, 67562004], [67568920, 67569065], [67577259, 67577327], [67581034, 67581147], [67591434, 67591592], [67592848, 67592940], [67596824, 67596910], [67600612, 67600654]]	[[67559262, 67559287], [67561934, 67562004], [67568920, 67569065], [67577259, 67577327], [67581034, 67581147], [67591434, 67591592], [67592848, 67592923]]
NM_001276351	[[67557858, 67559287], [67560917, 67561104], [67561934, 67562004], [67581034, 67581147], [67591434, 67591592], [67592848, 67592940], [67596824, 67596910], [67600612, 67600654]]	[[67558687, 67559287], [67560917, 67561104], [67561934, 67562004], [67581034, 67581147], [67591434, 67591592], [67592848, 67592923]]

Promoter

Chrom	Start	End	Description
chr1	67600640	67600658	CAGE_peak_1_at_C1orf141_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I067018	67018727	67020893	0.8	[{'connected_gene': 'WDR78', 'score': 25.21}, {'connected_gene': 'C1orf141', 'score': 10.93}, {'connected_gene': 'ENSG00000252433', 'score': 10.83}, {'connected_gene': 'MIER1', 'score': 9.91}, {'connected_gene': 'SLC35D1', 'score': 5.72}]
chr1	GH01I067191	67191059	67193196	0.86	[{'connected_gene': 'C1orf141', 'score': 20.41}, {'connected_gene': 'MIER1', 'score': 5.04}, {'connected_gene': 'RNU6-586P', 'score': 0.77}, {'connected_gene': 'GC01M067171', 'score': 0.37}, {'connected_gene': 'IL23R', 'score': 0.23}]
chr1	GH01I067131	67131542	67131601	0.5	[{'connected_gene': 'C1orf141', 'score': 550.15}, {'connected_gene': 'IL23R', 'score': 0.44}, {'connected_gene': 'ENSG00000275678', 'score': 0.44}]
chr1	GH01I067563	67563723	67564911	0.88	[{'connected_gene': 'C1orf141', 'score': 2.67}, {'connected_gene': 'LOC105378780', 'score': 0.77}, {'connected_gene': 'RN7SL392P', 'score': 0.16}]
chr1	GH01I066463	66463974	66467051	0.85	[{'connected_gene': 'C1orf141', 'score': 4.34}, {'connected_gene': 'GC01M066486', 'score': 0.34}, {'connected_gene': 'GC01P066439', 'score': 0.31}]
chr1	GH01I067084	67084601	67084800	0.2	[{'connected_gene': 'C1orf141', 'score': 11.01}, {'connected_gene': 'GC01P067080', 'score': 0.77}, {'connected_gene': 'ENSG00000252433', 'score': 0.37}]
chr1	GH01I067112	67112538	67112687	0.56	[{'connected_gene': 'C1orf141', 'score': 12.3}, {'connected_gene': 'ENSG00000252433', 'score': 0.44}, {'connected_gene': 'ENSG00000275678', 'score': 0.39}]
chr1	GH01I067162	67162439	67163687	0.8	[{'connected_gene': 'SLC35D1', 'score': 5.9}, {'connected_gene': 'GC01P067166', 'score': 0.77}, {'connected_gene': 'IL23R', 'score': 0.34}, {'connected_gene': 'C1orf141', 'score': 0.2}]
chr1	GH01I067137	67137017	67139957	0.62	[{'connected_gene': 'IL23R', 'score': 550.77}, {'connected_gene': 'C1orf141', 'score': 12.0}, {'connected_gene': 'ENSG00000252433', 'score': 10.84}, {'connected_gene': 'RNU6-586P', 'score': 10.79}, {'connected_gene': 'SLC35D1', 'score': 8.9}, {'connected_gene': 'ENSG00000275678', 'score': 0.39}]
chr1	GH01I067149	67149001	67149614	0.98	[{'connected_gene': 'IL23R', 'score': 0.39}, {'connected_gene': 'GC01P067166', 'score': 0.37}, {'connected_gene': 'C1orf141', 'score': 0.18}]
chr1	GH01I067134	67134601	67135001	0.68	[{'connected_gene': 'IL23R', 'score': 0.77}, {'connected_gene': 'ENSG00000275678', 'score': 0.39}, {'connected_gene': 'C1orf141', 'score': 0.15}]
chr1	GH01I067194	67194148	67195646	0.97	[{'connected_gene': 'RNU6-586P', 'score': 550.77}, {'connected_gene': 'C1orf141', 'score': 6.18}, {'connected_gene': 'IL23R', 'score': 5.89}, {'connected_gene': 'SLC35D1', 'score': 3.12}, {'connected_gene': 'WDR78', 'score': 2.66}, {'connected_gene': 'IL12RB2', 'score': 2.32}, {'connected_gene': 'MIER1', 'score': 2.0}, {'connected_gene': 'INSL5', 'score': 1.31}, {'connected_gene': 'GC01M067171', 'score': 0.34}]
chr1	GH01I067170	67170449	67172207	0.74	[{'connected_gene': 'RNU6-586P', 'score': 12.06}, {'connected_gene': 'C1orf141', 'score': 11.13}, {'connected_gene': 'ENSG00000252433', 'score': 10.69}, {'connected_gene': 'GC01M067171', 'score': 0.77}, {'connected_gene': 'GC01P067166', 'score': 0.44}, {'connected_gene': 'IL23R', 'score': 0.29}]
chr1	GH01I067211	67211718	67211867	0.52	[{'connected_gene': 'RNU4ATAC4P', 'score': 10.71}, {'connected_gene': 'RNU6-586P', 'score': 0.37}, {'connected_gene': 'C1orf141', 'score': 0.34}, {'connected_gene': 'GC01M067200', 'score': 0.23}, {'connected_gene': 'IL23R', 'score': 0.19}]
chr1	GH01I067226	67226650	67227061	0.29	[{'connected_gene': 'RNU4ATAC4P', 'score': 11.67}, {'connected_gene': 'RNU6-586P', 'score': 11.2}, {'connected_gene': 'IL23R', 'score': 1.79}, {'connected_gene': 'WDR78', 'score': 1.71}, {'connected_gene': 'C1orf141', 'score': 0.77}, {'connected_gene': 'GC01M067200', 'score': 0.28}]
chr1	GH01I067096	67096878	67097567	0.31	[{'connected_gene': 'ENSG00000252433', 'score': 0.44}, {'connected_gene': 'GC01P067080', 'score': 0.37}, {'connected_gene': 'C1orf141', 'score': 0.12}]
chr1	GH01I067165	67165600	67167904	1.29	[{'connected_gene': 'GC01P067166', 'score': 550.77}, {'connected_gene': 'IL23R', 'score': 550.31}, {'connected_gene': 'C1orf141', 'score': 7.76}, {'connected_gene': 'SLC35D1', 'score': 5.88}, {'connected_gene': 'GC01M067171', 'score': 0.44}]