Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000600175 [[57978030, 57978453], [57988001, 57988040], [57988644, 57988919]] [[57978408, 57978453], [57988001, 57988040], [57988644, 57988677]]
ENST00000601768 [[57978199, 57978453], [57988644, 57988872]] [[57978408, 57978453], [57988644, 57988677]]
ENST00000427512 [[57980953, 57985789], [57988644, 57988938]] [[57984641, 57985775]]
ENST00000343280 [[57980953, 57985789], [57986391, 57986514], [57987027, 57987154], [57988001, 57988040], [57988644, 57988938]] [[57984641, 57985789], [57986391, 57986514], [57987027, 57987154], [57988001, 57988040], [57988644, 57988677]]
ENST00000356584 [[57984412, 57985789], [57987027, 57987154], [57988001, 57988040], [57988644, 57988900]] [[57984641, 57985789], [57987027, 57987154], [57988001, 57988040], [57988644, 57988677]]
ENST00000425074 [[57984517, 57985789], [57988001, 57988040], [57988644, 57988934]] [[57985732, 57985789], [57988001, 57988040], [57988644, 57988677]]
ENST00000450712 [[57987104, 57987154], [57987747, 57988040], [57988644, 57988888]] [[57987854, 57988040], [57988644, 57988677]]
NM_001024596 [[57980953, 57985789], [57986391, 57986514], [57987027, 57987154], [57988001, 57988040], [57988644, 57988938]] [[57984641, 57985789], [57986391, 57986514], [57987027, 57987154], [57988001, 57988040], [57988644, 57988677]]
NM_001144068 [[57980953, 57985789], [57987027, 57987154], [57988001, 57988040], [57988644, 57988938]] [[57984641, 57985789], [57987027, 57987154], [57988001, 57988040], [57988644, 57988677]]
NM_001330613 [[57980953, 57985789], [57988001, 57988040], [57988644, 57988938]] [[57984641, 57985775]]
Promoter
Chrom Start End Description
chr19 57988878 57988941 CAGE_peak_1_at_ZNF772_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr19 GH19I057708 57707111 57707245 0.25 [{'connected_gene': 'ZNF587', 'score': 5.5}, {'connected_gene': 'ZSCAN4', 'score': 4.3}, {'connected_gene': 'ZNF154', 'score': 3.29}, {'connected_gene': 'ZNF772', 'score': 3.17}, {'connected_gene': 'ZNF418', 'score': 2.86}, {'connected_gene': 'ZNF549', 'score': 2.7}, {'connected_gene': 'ZNF17', 'score': 2.3}, {'connected_gene': 'ZNF543', 'score': 2.25}, {'connected_gene': 'ZSCAN1', 'score': 2.24}, {'connected_gene': 'ZSCAN18', 'score': 2.18}, {'connected_gene': 'ZNF135', 'score': 2.07}, {'connected_gene': 'ZNF671', 'score': 2.04}, {'connected_gene': 'ZNF606', 'score': 2.02}, {'connected_gene': 'ZIK1', 'score': 1.92}, {'connected_gene': 'ZNF419', 'score': 1.9}, {'connected_gene': 'ZNF256', 'score': 1.86}, {'connected_gene': 'ZNF551', 'score': 1.79}, {'connected_gene': 'ZNF304', 'score': 1.67}, {'connected_gene': 'ZNF134', 'score': 1.46}, {'connected_gene': 'ZNF548', 'score': 1.37}, {'connected_gene': 'ZNF586', 'score': 1.35}, {'connected_gene': 'ZNF416', 'score': 1.19}, {'connected_gene': 'ZNF773', 'score': 1.15}, {'connected_gene': 'ZNF814', 'score': 1.14}, {'connected_gene': 'VN1R1', 'score': 1.13}, {'connected_gene': 'GC19P057687', 'score': 0.37}, {'connected_gene': 'ENSG00000269026', 'score': 0.31}]
chr19 GH19I057886 57886874 57889642 1.98 [{'connected_gene': 'ZNF814', 'score': 550.77}, {'connected_gene': 'ZNF417', 'score': 14.94}, {'connected_gene': 'ZNF587', 'score': 14.83}, {'connected_gene': 'ZNF154', 'score': 5.06}, {'connected_gene': 'ZNF418', 'score': 2.67}, {'connected_gene': 'ZNF256', 'score': 2.13}, {'connected_gene': 'ZSCAN4', 'score': 2.0}, {'connected_gene': 'ZNF548', 'score': 1.94}, {'connected_gene': 'ZNF606', 'score': 1.91}, {'connected_gene': 'ZNF135', 'score': 1.85}, {'connected_gene': 'ZNF134', 'score': 1.77}, {'connected_gene': 'ZNF329', 'score': 1.66}, {'connected_gene': 'ZNF549', 'score': 1.62}, {'connected_gene': 'ZNF671', 'score': 1.54}, {'connected_gene': 'ZNF772', 'score': 1.41}, {'connected_gene': 'ZNF776', 'score': 1.36}, {'connected_gene': 'ZSCAN1', 'score': 1.36}, {'connected_gene': 'PIR51538', 'score': 0.39}, {'connected_gene': 'ENSG00000269476', 'score': 0.31}]
chr19 GH19I056983 56983292 56983992 0.89 [{'connected_gene': 'AURKC', 'score': 12.26}, {'connected_gene': 'USP29', 'score': 9.1}, {'connected_gene': 'ZNF471', 'score': 2.08}, {'connected_gene': 'ZNF835', 'score': 1.62}, {'connected_gene': 'ZNF772', 'score': 1.28}, {'connected_gene': 'GC19P057027', 'score': 0.26}, {'connected_gene': 'ENSG00000269786', 'score': 0.21}]
chr19 GH19I056594 56594730 56596150 1.97 [{'connected_gene': 'ZNF71', 'score': 570.12}, {'connected_gene': 'U2AF2', 'score': 103.7}, {'connected_gene': 'ZNF17', 'score': 88.74}, {'connected_gene': 'ZNF543', 'score': 86.68}, {'connected_gene': 'ZNF549', 'score': 82.3}, {'connected_gene': 'ZNF264', 'score': 81.25}, {'connected_gene': 'ZNF773', 'score': 79.55}, {'connected_gene': 'ENSG00000269696', 'score': 76.56}, {'connected_gene': 'ZNF550', 'score': 69.28}, {'connected_gene': 'ZFP28', 'score': 59.76}, {'connected_gene': 'ZNF470', 'score': 59.46}, {'connected_gene': 'ZNF835', 'score': 58.72}, {'connected_gene': 'ZNF542P', 'score': 57.63}, {'connected_gene': 'ZNF471', 'score': 56.8}, {'connected_gene': 'ENSG00000267523', 'score': 51.83}, {'connected_gene': 'ZNF583', 'score': 51.46}, {'connected_gene': 'ZNF582', 'score': 50.38}, {'connected_gene': 'ZNF667', 'score': 49.86}, {'connected_gene': 'FIZ1', 'score': 48.83}, {'connected_gene': 'ZNF304', 'score': 46.71}, {'connected_gene': 'ZNF582-AS1', 'score': 44.09}, {'connected_gene': 'SMIM17', 'score': 43.71}, {'connected_gene': 'LOC729999', 'score': 40.57}, {'connected_gene': 'ZNF667-AS1', 'score': 39.41}, {'connected_gene': 'ENSG00000267096', 'score': 30.43}, {'connected_gene': 'ZNF805', 'score': 30.29}, {'connected_gene': 'ZIM2', 'score': 28.54}, {'connected_gene': 'ZIK1', 'score': 27.65}, {'connected_gene': 'ZNF581', 'score': 24.06}, {'connected_gene': 'ZIM2-AS1', 'score': 23.94}, {'connected_gene': 'PEG3', 'score': 22.15}, {'connected_gene': 'LOC105372468', 'score': 21.65}, {'connected_gene': 'ZNF580', 'score': 21.64}, {'connected_gene': 'ZNF460-AS1', 'score': 20.24}, {'connected_gene': 'ZNF749', 'score': 19.58}, {'connected_gene': 'ZNF419', 'score': 19.15}, {'connected_gene': 'ENSG00000267776', 'score': 18.62}, {'connected_gene': 'ENSG00000267224', 'score': 18.22}, {'connected_gene': 'ZNF460', 'score': 18.19}, {'connected_gene': 'VN1R1', 'score': 14.52}, {'connected_gene': 'ENSG00000268678', 'score': 13.74}, {'connected_gene': 'CCDC106', 'score': 13.54}, {'connected_gene': 'EDDM13', 'score': 13.31}, {'connected_gene': 'ZNF547', 'score': 12.44}, {'connected_gene': 'ZNF772', 'score': 12.09}, {'connected_gene': 'LOC100132009', 'score': 11.59}, {'connected_gene': 'ENSG00000268713', 'score': 11.32}, {'connected_gene': 'MIMT1', 'score': 10.5}, {'connected_gene': 'ENSG00000268205', 'score': 10.21}, {'connected_gene': 'LOC101928982', 'score': 10.06}, {'connected_gene': 'ZSCAN5A', 'score': 9.8}, {'connected_gene': 'ZNF444', 'score': 9.74}, {'connected_gene': 'GC19P056600', 'score': 0.44}]
chr19 GH19I057476 57476733 57478222 1.97 [{'connected_gene': 'ZNF772', 'score': 562.83}, {'connected_gene': 'ENSG00000268163', 'score': 550.77}, {'connected_gene': 'ENSG00000268266', 'score': 550.77}, {'connected_gene': 'ZNF773', 'score': 46.69}, {'connected_gene': 'ZNF417', 'score': 43.86}, {'connected_gene': 'VN1R1', 'score': 42.06}, {'connected_gene': 'ZNF446', 'score': 38.99}, {'connected_gene': 'ZNF606', 'score': 38.05}, {'connected_gene': 'ZNF134', 'score': 33.62}, {'connected_gene': 'ZNF17', 'score': 24.98}, {'connected_gene': 'ZNF543', 'score': 21.24}, {'connected_gene': 'ZNF548', 'score': 20.62}, {'connected_gene': 'ZNF274', 'score': 20.6}, {'connected_gene': 'ZNF135', 'score': 19.72}, {'connected_gene': 'ZNF549', 'score': 18.91}, {'connected_gene': 'ZNF667', 'score': 18.53}, {'connected_gene': 'ZNF329', 'score': 18.25}, {'connected_gene': 'ENSG00000269696', 'score': 16.71}, {'connected_gene': 'ZNF71', 'score': 16.41}, {'connected_gene': 'ENSG00000268912', 'score': 16.4}, {'connected_gene': 'ZSCAN22', 'score': 16.21}, {'connected_gene': 'ZNF550', 'score': 15.05}, {'connected_gene': 'ZNF324B', 'score': 14.66}, {'connected_gene': 'ZSCAN1', 'score': 14.31}, {'connected_gene': 'LOC100419848', 'score': 14.05}, {'connected_gene': 'ZSCAN18', 'score': 13.51}, {'connected_gene': 'ENSG00000268201', 'score': 13.48}, {'connected_gene': 'ZNF587', 'score': 13.42}, {'connected_gene': 'ZNF470', 'score': 13.41}, {'connected_gene': 'SMIM17', 'score': 13.31}, {'connected_gene': 'ZNF837', 'score': 13.01}, {'connected_gene': 'LETM1P2', 'score': 12.94}, {'connected_gene': 'ZNF547', 'score': 12.55}, {'connected_gene': 'LOC100128398', 'score': 12.47}, {'connected_gene': 'ZNF776', 'score': 12.31}, {'connected_gene': 'ENSG00000232098', 'score': 11.98}, {'connected_gene': 'ZNF835', 'score': 11.87}, {'connected_gene': 'ENSG00000268713', 'score': 11.35}, {'connected_gene': 'ZIM2-AS1', 'score': 11.31}, {'connected_gene': 'ZNF544', 'score': 11.13}, {'connected_gene': 'ZNF551', 'score': 11.07}, {'connected_gene': 'PEG3', 'score': 11.06}, {'connected_gene': 'ZNF416', 'score': 11.02}, {'connected_gene': 'ZNF419', 'score': 10.86}, {'connected_gene': 'ZNF264', 'score': 10.52}, {'connected_gene': 'ZIM2', 'score': 10.45}, {'connected_gene': 'ZNF256', 'score': 10.35}, {'connected_gene': 'ZNF418', 'score': 10.32}, {'connected_gene': 'ENSG00000268205', 'score': 10.27}, {'connected_gene': 'ZNF211', 'score': 10.17}, {'connected_gene': 'LOC105372483', 'score': 10.14}, {'connected_gene': 'ZNF132', 'score': 9.93}, {'connected_gene': 'ZNF324', 'score': 9.91}, {'connected_gene': 'LOC101928982', 'score': 9.86}, {'connected_gene': 'ENSG00000267224', 'score': 9.84}, {'connected_gene': 'VN1R107P', 'score': 0.37}, {'connected_gene': 'GC19M057458', 'score': 0.13}, {'connected_gene': 'GC19M057341', 'score': 0.1}]
chr19 GH19I057000 57000096 57004029 0.63 [{'connected_gene': 'ZNF772', 'score': 4.35}, {'connected_gene': 'GC19P057027', 'score': 0.31}, {'connected_gene': 'ENSG00000269786', 'score': 0.18}]
chr19 GH19I057499 57499253 57501189 1.95 [{'connected_gene': 'ZNF773', 'score': 571.86}, {'connected_gene': 'ZNF419', 'score': 48.02}, {'connected_gene': 'ZNF264', 'score': 41.64}, {'connected_gene': 'ZNF805', 'score': 33.16}, {'connected_gene': 'ZNF543', 'score': 31.23}, {'connected_gene': 'ZNF548', 'score': 27.47}, {'connected_gene': 'ZNF550', 'score': 22.91}, {'connected_gene': 'ZNF134', 'score': 22.32}, {'connected_gene': 'VN1R1', 'score': 17.11}, {'connected_gene': 'ZNF417', 'score': 14.0}, {'connected_gene': 'ZNF256', 'score': 13.09}, {'connected_gene': 'ZNF549', 'score': 12.58}, {'connected_gene': 'ZNF587B', 'score': 12.0}, {'connected_gene': 'ZNF586', 'score': 11.9}, {'connected_gene': 'ZNF772', 'score': 11.83}, {'connected_gene': 'ZNF460', 'score': 11.66}, {'connected_gene': 'ENSG00000268392', 'score': 10.93}, {'connected_gene': 'ZNF776', 'score': 10.47}, {'connected_gene': 'ZNF749', 'score': 10.24}, {'connected_gene': 'ZSCAN22', 'score': 9.68}, {'connected_gene': 'ZNF460-AS1', 'score': 5.1}, {'connected_gene': 'PIR62372', 'score': 0.44}, {'connected_gene': 'ENSG00000268107', 'score': 0.39}, {'connected_gene': 'GC19M057458', 'score': 0.16}, {'connected_gene': 'GC19M057341', 'score': 0.12}]
chr19 GH19I057010 57010682 57010833 0.39 [{'connected_gene': 'ZIM2', 'score': 2.19}, {'connected_gene': 'PEG3', 'score': 2.19}, {'connected_gene': 'ZNF772', 'score': 2.13}, {'connected_gene': 'ZNF835', 'score': 1.72}, {'connected_gene': 'SMIM17', 'score': 1.53}, {'connected_gene': 'ZNF470', 'score': 1.34}, {'connected_gene': 'ZNF543', 'score': 1.15}, {'connected_gene': 'GC19P057027', 'score': 0.37}, {'connected_gene': 'ENSG00000269786', 'score': 0.17}]
chr19 GH19I057388 57388908 57391090 2.03 [{'connected_gene': 'ZNF548', 'score': 566.29}, {'connected_gene': 'ENSG00000269533', 'score': 550.77}, {'connected_gene': 'ZNF264', 'score': 31.94}, {'connected_gene': 'ZSCAN18', 'score': 25.29}, {'connected_gene': 'ENSG00000269696', 'score': 24.92}, {'connected_gene': 'LOC100128398', 'score': 23.82}, {'connected_gene': 'ZNF835', 'score': 23.72}, {'connected_gene': 'ZNF470', 'score': 23.55}, {'connected_gene': 'ZNF805', 'score': 23.3}, {'connected_gene': 'ZNF582-AS1', 'score': 23.14}, {'connected_gene': 'ZNF583', 'score': 22.57}, {'connected_gene': 'ZNF543', 'score': 20.35}, {'connected_gene': 'ZNF304', 'score': 19.56}, {'connected_gene': 'ZNF667', 'score': 18.53}, {'connected_gene': 'ZNF667-AS1', 'score': 16.81}, {'connected_gene': 'ZNF135', 'score': 16.31}, {'connected_gene': 'ZNF549', 'score': 15.85}, {'connected_gene': 'ZNF582', 'score': 15.43}, {'connected_gene': 'VN1R1', 'score': 14.7}, {'connected_gene': 'ZSCAN1', 'score': 14.31}, {'connected_gene': 'ZNF471', 'score': 13.85}, {'connected_gene': 'ENSG00000268201', 'score': 13.48}, {'connected_gene': 'SMIM17', 'score': 13.31}, {'connected_gene': 'LETM1P2', 'score': 12.94}, {'connected_gene': 'ZNF547', 'score': 12.73}, {'connected_gene': 'ZNF772', 'score': 12.23}, {'connected_gene': 'LOC105372482', 'score': 12.17}, {'connected_gene': 'ZNF606', 'score': 12.14}, {'connected_gene': 'ZFP28', 'score': 12.12}, {'connected_gene': 'ZNF329', 'score': 11.77}, {'connected_gene': 'ZIM2-AS1', 'score': 11.31}, {'connected_gene': 'ZNF418', 'score': 11.3}, {'connected_gene': 'PEG3', 'score': 11.06}, {'connected_gene': 'ZNF17', 'score': 11.01}, {'connected_gene': 'ZNF419', 'score': 10.61}, {'connected_gene': 'ZIM2', 'score': 10.45}, {'connected_gene': 'ENSG00000268205', 'score': 10.35}, {'connected_gene': 'ZNF71', 'score': 10.27}, {'connected_gene': 'ZNF134', 'score': 9.96}, {'connected_gene': 'ZNF460-AS1', 'score': 9.95}, {'connected_gene': 'LOC101928982', 'score': 9.86}, {'connected_gene': 'ENSG00000267224', 'score': 9.84}, {'connected_gene': 'ZNF749', 'score': 4.96}, {'connected_gene': 'ENSG00000268533', 'score': 0.77}, {'connected_gene': 'ENSG00000268133', 'score': 0.31}, {'connected_gene': 'GC19M057341', 'score': 0.07}]
chr19 GH19I057632 57632513 57634319 1.99 [{'connected_gene': 'ZNF211', 'score': 568.46}, {'connected_gene': 'GC19M057341', 'score': 550.77}, {'connected_gene': 'ZNF264', 'score': 37.36}, {'connected_gene': 'TRIM28', 'score': 36.12}, {'connected_gene': 'ZNF548', 'score': 25.45}, {'connected_gene': 'ZNF805', 'score': 23.24}, {'connected_gene': 'ZNF550', 'score': 22.22}, {'connected_gene': 'ZNF134', 'score': 20.58}, {'connected_gene': 'ZNF543', 'score': 20.21}, {'connected_gene': 'ZNF417', 'score': 11.8}, {'connected_gene': 'ZNF551', 'score': 11.21}, {'connected_gene': 'ZNF549', 'score': 11.04}, {'connected_gene': 'ZNF671', 'score': 10.77}, {'connected_gene': 'ZNF772', 'score': 10.62}, {'connected_gene': 'ZNF274', 'score': 10.54}, {'connected_gene': 'RPS5', 'score': 10.22}, {'connected_gene': 'VN1R1', 'score': 9.99}, {'connected_gene': 'ZNF324B', 'score': 9.75}, {'connected_gene': 'ZNF329', 'score': 9.23}]
chr19 GH19I057065 57065255 57066011 0.2 [{'connected_gene': 'RPL7AP69', 'score': 550.77}, {'connected_gene': 'ZNF772', 'score': 4.35}, {'connected_gene': 'LOC105372475', 'score': 0.44}, {'connected_gene': 'GC19M057058', 'score': 0.39}]
chr19 GH19I057663 57663788 57665429 1.64 [{'connected_gene': 'TPRG1LP1', 'score': 550.77}, {'connected_gene': 'ZNF671', 'score': 12.58}, {'connected_gene': 'ZNF256', 'score': 11.23}, {'connected_gene': 'ZNF749', 'score': 10.0}, {'connected_gene': 'ZNF419', 'score': 9.98}, {'connected_gene': 'ZNF211', 'score': 9.93}, {'connected_gene': 'RPL19P19', 'score': 9.82}, {'connected_gene': 'VN1R1', 'score': 9.33}, {'connected_gene': 'ENSG00000269867', 'score': 9.19}, {'connected_gene': 'ZNF418', 'score': 3.32}, {'connected_gene': 'ZNF543', 'score': 3.06}, {'connected_gene': 'ZNF772', 'score': 2.63}, {'connected_gene': 'ZNF135', 'score': 2.61}, {'connected_gene': 'ZNF17', 'score': 2.49}, {'connected_gene': 'ZSCAN18', 'score': 2.36}, {'connected_gene': 'ZNF776', 'score': 1.96}, {'connected_gene': 'ZNF549', 'score': 1.91}, {'connected_gene': 'ZSCAN1', 'score': 1.86}, {'connected_gene': 'ZNF304', 'score': 1.84}, {'connected_gene': 'ZNF550', 'score': 1.8}, {'connected_gene': 'ZNF551', 'score': 1.65}, {'connected_gene': 'ZNF417', 'score': 1.44}, {'connected_gene': 'ZNF460', 'score': 1.4}, {'connected_gene': 'ZNF548', 'score': 1.29}, {'connected_gene': 'ZNF586', 'score': 1.25}, {'connected_gene': 'ZSCAN4', 'score': 0.39}]

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