PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr17	76975997	76976051	CAGE_peak_1_at_LGALS3BP_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr17	GH17I078958	78958238	78959358	0.93	[{'connected_gene': 'LGALS3BP', 'score': 12.99}, {'connected_gene': 'USP36', 'score': 12.26}, {'connected_gene': 'GC17P078963', 'score': 0.77}, {'connected_gene': 'TIMP2', 'score': 0.29}]
chr17	GH17I078974	78974329	78981308	2.43	[{'connected_gene': 'LGALS3BP', 'score': 550.77}, {'connected_gene': 'USP36', 'score': 13.44}, {'connected_gene': 'CANT1', 'score': 8.43}, {'connected_gene': 'GC17P078963', 'score': 0.37}]
chr17	GH17I078973	78973201	78973635	0.51	[{'connected_gene': 'LGALS3BP', 'score': 0.44}, {'connected_gene': 'GC17P078963', 'score': 0.39}]
chr17	GH17I078985	78985649	78988270	1.32	[{'connected_gene': 'CANT1', 'score': 27.73}, {'connected_gene': 'USP36', 'score': 20.39}, {'connected_gene': 'C1QTNF1', 'score': 11.36}, {'connected_gene': 'ENGASE', 'score': 5.88}, {'connected_gene': 'LGALS3BP', 'score': 0.44}, {'connected_gene': 'PIR37172', 'score': 0.44}]
chr17	GH17I078970	78970938	78972028	1.26	[{'connected_gene': 'CANT1', 'score': 5.16}, {'connected_gene': 'LGALS3BP', 'score': 0.44}, {'connected_gene': 'GC17P078963', 'score': 0.44}]
chr17	GH17I078964	78964841	78966031	0.46	[{'connected_gene': 'CANT1', 'score': 5.7}, {'connected_gene': 'GC17P078963', 'score': 0.77}, {'connected_gene': 'LGALS3BP', 'score': 0.39}]
chr17	GH17I078966	78966443	78967259	0.69	[{'connected_gene': 'GC17P078963', 'score': 0.77}, {'connected_gene': 'LGALS3BP', 'score': 0.39}]
chr17	GH17I078988	78988299	78988350	0.31	[{'connected_gene': 'PIR37172', 'score': 0.77}, {'connected_gene': 'LGALS3BP', 'score': 0.44}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000591778	[[76967319, 76968786], [76970769, 76970901], [76972046, 76972238], [76973221, 76973296], [76975905, 76976000]]	[[76968544, 76968786], [76970769, 76970901], [76972046, 76972238], [76973221, 76973273]]
ENST00000262776	[[76967319, 76968786], [76969051, 76969304], [76970769, 76970901], [76972046, 76972238], [76973221, 76973296], [76975905, 76976191]]	[[76967657, 76968786], [76969051, 76969304], [76970769, 76970901], [76972046, 76972238], [76973221, 76973273]]
ENST00000587311	[[76967337, 76968786], [76969051, 76969257], [76972163, 76972238], [76973221, 76973296], [76975905, 76976005]]	[[76969237, 76969257], [76972163, 76972238], [76973221, 76973273]]
ENST00000586720	[[76967366, 76968786], [76969051, 76969207], [76973221, 76973296], [76975905, 76975990]]	[[76969202, 76969207], [76973221, 76973273]]
ENST00000587251	[[76967412, 76968786], [76969051, 76969304], [76970769, 76970854], [76972034, 76972238], [76973221, 76973296], [76975905, 76976005]]	[[76969303, 76969304], [76970769, 76970854], [76972034, 76972238], [76973221, 76973273]]
ENST00000588508	[[76968467, 76968786], [76969051, 76969304], [76970769, 76971079]]	None
ENST00000588198	[[76968551, 76968786], [76969051, 76969425], [76970769, 76970901], [76972046, 76972238], [76973221, 76973296], [76975905, 76976029]]	[[76969405, 76969425], [76970769, 76970901], [76972046, 76972238], [76973221, 76973273]]
ENST00000589527	[[76968638, 76968786], [76969051, 76969304], [76970769, 76970901], [76972046, 76972238], [76973221, 76973296], [76973387, 76973405]]	[[76968638, 76968786], [76969051, 76969304], [76970769, 76970901], [76972046, 76972238], [76973221, 76973273]]
ENST00000588587	[[76968729, 76969425], [76970769, 76970901], [76972046, 76972238]]	None
ENST00000592255	[[76968850, 76969297], [76970769, 76970878]]	None
ENST00000585407	[[76968879, 76969304], [76970769, 76970901], [76972046, 76972238], [76973221, 76973296], [76975905, 76976017]]	[[76969047, 76969304], [76970769, 76970901], [76972046, 76972238], [76973221, 76973273]]
ENST00000589775	[[76969051, 76969304], [76970769, 76970901], [76972046, 76972238], [76973221, 76973296], [76975527, 76975668], [76975905, 76976005]]	[[76969051, 76969304], [76970769, 76970901], [76972046, 76972238], [76973221, 76973273]]
ENST00000589906	[[76969056, 76969304], [76970769, 76970901], [76973221, 76973296], [76975905, 76975990]]	[[76969056, 76969304], [76970769, 76970901], [76973221, 76973273]]
ENST00000587310	[[76969081, 76969304], [76970769, 76970901], [76972046, 76972238], [76973024, 76973082], [76973221, 76973296], [76975905, 76975993]]	[[76972222, 76972238], [76973024, 76973082], [76973221, 76973273]]
ENST00000588205	[[76969269, 76969304], [76970769, 76970901], [76972046, 76972238], [76973076, 76973298]]	[[76973084, 76973273]]
ENST00000588990	[[76970712, 76970901], [76972046, 76972238], [76973024, 76973082], [76973221, 76973296], [76975905, 76976009]]	[[76972222, 76972238], [76973024, 76973082], [76973221, 76973273]]
ENST00000588899	[[76970713, 76970901], [76972046, 76972238], [76973076, 76973296], [76975905, 76975973]]	[[76973084, 76973273]]
ENST00000591274	[[76970879, 76970901], [76972046, 76972238], [76973221, 76973296], [76973485, 76973555], [76975905, 76975925]]	[[76970879, 76970901], [76972046, 76972238], [76973221, 76973273]]
ENST00000586300	[[76972906, 76973296], [76975905, 76975957]]	None
NM_005567	[[76967334, 76968786], [76969051, 76969304], [76970769, 76970901], [76972046, 76972238], [76973221, 76973296], [76975905, 76976061]]	[[76967657, 76968786], [76969051, 76969304], [76970769, 76970901], [76972046, 76972238], [76973221, 76973273]]