PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000287020	[[97154561, 97157752], [97172514, 97173020]]	[[97156790, 97157752], [97172514, 97172920]]
NM_001001557	[[97154560, 97157752], [97172514, 97173020]]	[[97156790, 97157752], [97172514, 97172920]]

Promoter

Chrom	Start	End	Description
chr8	97173020	97173041	CAGE_peak_1_at_GDF6_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I096231	96231713	96231862	0.63	[{'connected_gene': 'PTDSS1', 'score': 11.71}, {'connected_gene': 'MTERF3', 'score': 11.71}, {'connected_gene': 'GDF6', 'score': 10.67}, {'connected_gene': 'UQCRB', 'score': 0.77}, {'connected_gene': 'LOC101927039', 'score': 0.77}, {'connected_gene': 'GC08P096183', 'score': 0.25}]
chr8	GH08I096227	96227253	96227402	0.65	[{'connected_gene': 'MTERF3', 'score': 20.91}, {'connected_gene': 'PTDSS1', 'score': 11.69}, {'connected_gene': 'GDF6', 'score': 10.68}, {'connected_gene': 'UQCRB', 'score': 0.44}, {'connected_gene': 'LOC101927039', 'score': 0.44}, {'connected_gene': 'GC08P096183', 'score': 0.26}]
chr8	GH08I096103	96103296	96105553	0.8	[{'connected_gene': 'MTERF3', 'score': 11.64}, {'connected_gene': 'GDF6', 'score': 11.45}, {'connected_gene': 'C8orf37', 'score': 11.31}, {'connected_gene': 'TUBBP7', 'score': 0.34}, {'connected_gene': 'GAPDHP30', 'score': 0.29}]
chr8	GH08I096096	96096303	96097529	0.43	[{'connected_gene': 'GDF6', 'score': 11.01}, {'connected_gene': 'GAPDHP30', 'score': 0.31}, {'connected_gene': 'TUBBP7', 'score': 0.29}]
chr8	GH08I095807	95807503	95809316	0.66	[{'connected_gene': 'GDF6', 'score': 9.9}, {'connected_gene': 'GC08M095906', 'score': 0.15}, {'connected_gene': 'GC08P095632', 'score': 0.1}, {'connected_gene': 'C8orf37-AS1', 'score': 0.03}]
chr8	GH08I095804	95804629	95806406	0.76	[{'connected_gene': 'GDF6', 'score': 9.9}, {'connected_gene': 'GC08M095906', 'score': 0.15}, {'connected_gene': 'GC08P095632', 'score': 0.1}, {'connected_gene': 'C8orf37-AS1', 'score': 0.03}]
chr8	GH08I095799	95799523	95803973	1.27	[{'connected_gene': 'GDF6', 'score': 4.25}, {'connected_gene': 'GC08M095906', 'score': 0.14}, {'connected_gene': 'GC08P095632', 'score': 0.09}, {'connected_gene': 'C8orf37-AS1', 'score': 0.03}]
chr8	GH08I096098	96098709	96100934	0.38	[{'connected_gene': 'GDF6', 'score': 11.01}, {'connected_gene': 'TUBBP7', 'score': 0.31}, {'connected_gene': 'GAPDHP30', 'score': 0.29}]
chr8	GH08I096132	96132748	96133600	0.88	[{'connected_gene': 'GDF6', 'score': 17.05}, {'connected_gene': 'TUBBP7', 'score': 0.44}, {'connected_gene': 'ENSG00000270131', 'score': 0.44}]
chr8	GH08I096160	96160453	96162342	1.94	[{'connected_gene': 'GDF6', 'score': 582.1}, {'connected_gene': 'GC08P096183', 'score': 0.34}]
chr8	GH08I096172	96172470	96174067	0.38	[{'connected_gene': 'GDF6', 'score': 18.51}, {'connected_gene': 'GC08P096183', 'score': 0.39}]
chr8	GH08I096171	96171973	96172102	0.46	[{'connected_gene': 'GDF6', 'score': 0.39}, {'connected_gene': 'GC08P096183', 'score': 0.39}]
chr8	GH08I096164	96164433	96164582	0.65	[{'connected_gene': 'GDF6', 'score': 21.05}, {'connected_gene': 'GC08P096183', 'score': 0.37}]
chr8	GH08I096158	96158866	96159225	0.4	[{'connected_gene': 'GDF6', 'score': 554.62}, {'connected_gene': 'ENSG00000270131', 'score': 0.37}]
chr8	GH08I096161	96160013	96160302	0.52	[{'connected_gene': 'GDF6', 'score': 571.3}, {'connected_gene': 'ENSG00000270131', 'score': 0.37}]
chr8	GH08I096154	96154531	96154562	0.31	[{'connected_gene': 'GDF6', 'score': 0.44}, {'connected_gene': 'ENSG00000270131', 'score': 0.39}]
chr8	GH08I096165	96165534	96165838	0.22	[{'connected_gene': 'GDF6', 'score': 13.45}, {'connected_gene': 'GC08P096183', 'score': 0.37}]
chr8	GH08I096163	96163993	96164142	0.49	[{'connected_gene': 'GDF6', 'score': 0.77}, {'connected_gene': 'GC08P096183', 'score': 0.37}]
chr8	GH08I096144	96144403	96146136	0.86	[{'connected_gene': 'ENSG00000270131', 'score': 0.77}, {'connected_gene': 'GDF6', 'score': 0.37}]
chr8	GH08I096180	96180213	96180362	0.6	[{'connected_gene': 'GC08P096183', 'score': 0.77}, {'connected_gene': 'GDF6', 'score': 0.37}]
chr8	GH08I096147	96147133	96147282	0.49	[{'connected_gene': 'ENSG00000270131', 'score': 0.44}, {'connected_gene': 'GDF6', 'score': 0.39}]