PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000515777	[[185939994, 185940109], [185940540, 185940645], [185940900, 185940997], [185941426, 185941950]]	[[185940082, 185940109], [185940540, 185940645], [185940900, 185940997], [185941426, 185941926]]
ENST00000513599	[[185939994, 185940109], [185940540, 185940997], [185941429, 185941956]]	None
ENST00000505610	[[185939994, 185940109], [185940540, 185940645], [185940900, 185940997], [185941429, 185941958]]	[[185940082, 185940109], [185940540, 185940645], [185940900, 185940997], [185941429, 185941926]]
ENST00000338875	[[185940082, 185940241], [185940540, 185940645], [185940777, 185940997], [185941426, 185941926]]	[[185940082, 185940241], [185940540, 185940645], [185940777, 185940997], [185941426, 185941926]]
NM_001300782	[[185939994, 185940109], [185940540, 185940645], [185940900, 185940997], [185941429, 185941958]]	[[185940082, 185940109], [185940540, 185940645], [185940900, 185940997], [185941429, 185941926]]
NM_001300781	[[185939994, 185940109], [185940540, 185940645], [185940900, 185940997], [185941426, 185941958]]	[[185940082, 185940109], [185940540, 185940645], [185940900, 185940997], [185941426, 185941926]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I184745	184745591	184749735	1.29	[{'connected_gene': 'CENPU', 'score': 14.19}, {'connected_gene': 'ENSG00000251139', 'score': 12.65}, {'connected_gene': 'ACSL1', 'score': 12.63}, {'connected_gene': 'HELT', 'score': 11.11}, {'connected_gene': 'CASP3', 'score': 10.83}, {'connected_gene': 'PRIMPOL', 'score': 10.83}, {'connected_gene': 'PIR41861', 'score': 0.44}, {'connected_gene': 'SLED1', 'score': 0.23}]
chr4	GH04I185136	185136833	185138974	0.4	[{'connected_gene': 'CFAP97', 'score': 11.31}, {'connected_gene': 'HELT', 'score': 11.1}, {'connected_gene': 'SLC25A4', 'score': 0.44}, {'connected_gene': 'LOC105377588', 'score': 0.23}]
chr4	GH04I185145	185145405	185145922	0.2	[{'connected_gene': 'HELT', 'score': 11.47}, {'connected_gene': 'SLC25A4', 'score': 0.77}, {'connected_gene': 'GC04P185149', 'score': 0.77}]
chr4	GH04I185018	185018785	185018844	0.73	[{'connected_gene': 'HELT', 'score': 550.77}, {'connected_gene': 'LINC02437', 'score': 0.31}]
chr4	GH04I185071	185071308	185071614	0.4	[{'connected_gene': 'HELT', 'score': 11.25}, {'connected_gene': 'ENSG00000249520', 'score': 0.44}, {'connected_gene': 'LOC105377588', 'score': 0.39}, {'connected_gene': 'LINC02436', 'score': 0.37}]
chr4	GH04I185039	185039602	185040200	0.94	[{'connected_gene': 'HELT', 'score': 12.32}, {'connected_gene': 'LINC02436', 'score': 0.39}]
chr4	GH04I185106	185106756	185110800	0.66	[{'connected_gene': 'SLC25A4', 'score': 11.94}, {'connected_gene': 'HELT', 'score': 11.13}, {'connected_gene': 'LOC105377588', 'score': 0.34}, {'connected_gene': 'LINC02436', 'score': 0.22}]
chr4	GH04I185115	185115769	185116485	1.32	[{'connected_gene': 'SLC25A4', 'score': 12.33}, {'connected_gene': 'HELT', 'score': 11.28}, {'connected_gene': 'LOC105377588', 'score': 0.31}]
chr4	GH04I185111	185111411	185114417	1.14	[{'connected_gene': 'SLC25A4', 'score': 11.94}, {'connected_gene': 'HELT', 'score': 11.12}, {'connected_gene': 'LOC105377588', 'score': 0.31}]
chr4	GH04I185117	185117280	185117771	0.65	[{'connected_gene': 'SLC25A4', 'score': 12.33}, {'connected_gene': 'HELT', 'score': 11.28}, {'connected_gene': 'LOC105377588', 'score': 0.29}]
chr4	GH04I185118	185118937	185121091	0.73	[{'connected_gene': 'SLC25A4', 'score': 18.47}, {'connected_gene': 'HELT', 'score': 11.27}, {'connected_gene': 'LOC105377588', 'score': 0.29}]
chr4	GH04I185005	185005001	185005638	0.85	[{'connected_gene': 'ACSL1', 'score': 11.35}, {'connected_gene': 'HELT', 'score': 0.39}, {'connected_gene': 'LINC02437', 'score': 0.37}]
chr4	GH04I184983	184983401	184984437	0.86	[{'connected_gene': 'LINC02437', 'score': 47.99}, {'connected_gene': 'HELT', 'score': 35.28}, {'connected_gene': 'ACSL1', 'score': 10.63}, {'connected_gene': 'ENSG00000279460', 'score': 0.77}, {'connected_gene': 'GC04P184973', 'score': 0.39}]
chr4	GH04I185086	185086235	185086583	0.56	[{'connected_gene': 'LOC105377588', 'score': 550.77}, {'connected_gene': 'LRP2BP', 'score': 29.12}, {'connected_gene': 'CCDC110', 'score': 21.61}, {'connected_gene': 'HELT', 'score': 11.82}, {'connected_gene': 'CASP3', 'score': 10.28}, {'connected_gene': 'PRIMPOL', 'score': 10.28}, {'connected_gene': 'LINC02436', 'score': 0.29}, {'connected_gene': 'SLC25A4', 'score': 0.22}]