PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000521053	[[142443928, 142444158], [142444650, 142444725], [142444923, 142445026], [142445226, 142445349], [142446012, 142446168], [142446785, 142446962], [142450325, 142450469], [142451242, 142451357], [142451735, 142451879], [142458006, 142458188], [142459689, 142459849], [142476508, 142476663], [142477498, 142477648], [142480696, 142480863], [142481155, 142481291], [142482949, 142483054], [142484231, 142484327], [142487502, 142487582], [142487875, 142487998], [142488718, 142488865], [142489238, 142489426], [142490009, 142490126], [142490440, 142490548], [142498650, 142498703], [142500216, 142500376], [142504908, 142505037], [142505437, 142505583], [142517169, 142517330]]	[[142505543, 142505583], [142517169, 142517249]]
ENST00000523857	[[142443928, 142444158], [142444650, 142444725], [142445226, 142445349], [142446012, 142446168], [142450325, 142450469], [142451242, 142451357], [142451735, 142451879], [142458006, 142458188], [142459689, 142459849], [142476508, 142476663], [142477498, 142477648], [142480696, 142480860], [142481155, 142481291], [142482949, 142483054], [142484101, 142484327], [142487502, 142487582], [142487875, 142487998], [142488718, 142488865], [142489238, 142489426], [142490009, 142490126], [142490440, 142490548], [142498650, 142498703], [142499796, 142499937], [142500216, 142500376], [142504908, 142505037], [142505437, 142505583], [142517169, 142517330]]	[[142505543, 142505583], [142517169, 142517249]]
ENST00000430863	[[142443931, 142444158], [142444650, 142444725], [142444923, 142445026], [142445226, 142445349], [142446012, 142446168], [142446785, 142446962], [142450325, 142450469], [142451242, 142451357], [142451735, 142451879], [142458006, 142458188], [142459689, 142459849], [142476508, 142476663], [142477498, 142477648], [142480696, 142480863], [142481155, 142481291], [142482949, 142483054], [142484231, 142484327], [142486024, 142486247], [142487502, 142487582], [142487875, 142487998], [142488718, 142488865], [142489306, 142489426], [142490009, 142490126], [142490440, 142490548], [142498650, 142498703], [142500216, 142500376], [142504908, 142505037], [142505437, 142505583], [142506419, 142506601], [142517169, 142517330]]	[[142444057, 142444158], [142444650, 142444725], [142444923, 142445026], [142445226, 142445349], [142446012, 142446168], [142446785, 142446962], [142450325, 142450469], [142451242, 142451357], [142451735, 142451879], [142458006, 142458188], [142459689, 142459849], [142476508, 142476663], [142477498, 142477648], [142480696, 142480863], [142481155, 142481291], [142482949, 142483054], [142484231, 142484327], [142486024, 142486247], [142487502, 142487582], [142487875, 142487998], [142488718, 142488865], [142489306, 142489426], [142490009, 142490126], [142490440, 142490548], [142498650, 142498703], [142500216, 142500376], [142504908, 142505037], [142505437, 142505583], [142506419, 142506601], [142517169, 142517249]]
ENST00000521161	[[142505010, 142505037], [142505437, 142505583], [142506419, 142506859]]	[[142505010, 142505037], [142505437, 142505583], [142506419, 142506576]]
NM_207414	[[142443928, 142444158], [142444650, 142444725], [142444923, 142445026], [142445226, 142445349], [142446012, 142446168], [142446785, 142446962], [142450325, 142450469], [142451242, 142451357], [142451735, 142451879], [142458006, 142458188], [142459689, 142459849], [142476508, 142476663], [142477498, 142477648], [142480696, 142480863], [142481155, 142481291], [142482949, 142483054], [142484231, 142484327], [142486024, 142486247], [142487502, 142487582], [142487875, 142487998], [142488718, 142488865], [142489306, 142489426], [142490009, 142490126], [142490440, 142490548], [142498650, 142498703], [142500216, 142500376], [142504908, 142505037], [142505437, 142505583], [142506419, 142506601], [142517169, 142517330]]	[[142444057, 142444158], [142444650, 142444725], [142444923, 142445026], [142445226, 142445349], [142446012, 142446168], [142446785, 142446962], [142450325, 142450469], [142451242, 142451357], [142451735, 142451879], [142458006, 142458188], [142459689, 142459849], [142476508, 142476663], [142477498, 142477648], [142480696, 142480863], [142481155, 142481291], [142482949, 142483054], [142484231, 142484327], [142486024, 142486247], [142487502, 142487582], [142487875, 142487998], [142488718, 142488865], [142489306, 142489426], [142490009, 142490126], [142490440, 142490548], [142498650, 142498703], [142500216, 142500376], [142504908, 142505037], [142505437, 142505583], [142506419, 142506601], [142517169, 142517249]]
NR_102364	[[142443928, 142444158], [142444650, 142444725], [142445226, 142445349], [142446012, 142446168], [142450325, 142450469], [142451242, 142451357], [142451735, 142451879], [142458006, 142458188], [142459689, 142459849], [142476508, 142476663], [142477498, 142477648], [142480696, 142480860], [142481155, 142481291], [142482949, 142483054], [142484101, 142484327], [142487502, 142487582], [142487875, 142487998], [142488718, 142488865], [142489238, 142489426], [142490009, 142490126], [142490440, 142490548], [142498650, 142498703], [142499796, 142499937], [142500216, 142500376], [142504908, 142505037], [142505437, 142505583], [142517169, 142517330]]	None
NR_102363	[[142443928, 142444158], [142444650, 142444725], [142444923, 142445026], [142445226, 142445349], [142446012, 142446168], [142446785, 142446962], [142450325, 142450469], [142451242, 142451357], [142451735, 142451879], [142458006, 142458188], [142459689, 142459849], [142476508, 142476663], [142477498, 142477648], [142480696, 142480860], [142481155, 142481291], [142482949, 142483054], [142484231, 142484327], [142487502, 142487582], [142487875, 142487998], [142488718, 142488865], [142489238, 142489426], [142490009, 142490126], [142490440, 142490548], [142498650, 142498703], [142500216, 142500376], [142504908, 142505037], [142505437, 142505583], [142517169, 142517330]]	None

Promoter

Chrom	Start	End	Description
chr8	142517317	142517332	CAGE_peak_1_at_FLJ43860_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I141507	141507212	141507271	0.5	[{'connected_gene': 'MROH5', 'score': 550.77}, {'connected_gene': 'LOC105375791', 'score': 0.44}]
chr8	GH08I141508	141508041	141508190	0.67	[{'connected_gene': 'MROH5', 'score': 550.77}, {'connected_gene': 'LOC105375791', 'score': 0.44}]
chr8	GH08I141567	141567061	141567230	0.69	[{'connected_gene': 'MROH5', 'score': 12.09}, {'connected_gene': 'GC08P141529', 'score': 0.28}, {'connected_gene': 'MIR1302-7', 'score': 0.08}]
chr8	GH08I141548	141548181	141548310	0.2	[{'connected_gene': 'MROH5', 'score': 12.34}, {'connected_gene': 'ENSG00000226490', 'score': 12.14}, {'connected_gene': 'GC08P141529', 'score': 0.37}, {'connected_gene': 'MIR1302-7', 'score': 0.07}]
chr8	GH08I141446	141446189	141447303	0.52	[{'connected_gene': 'LOC105375789', 'score': 550.77}, {'connected_gene': 'ENSG00000238854', 'score': 550.77}, {'connected_gene': 'HNRNPA1P38', 'score': 8.34}, {'connected_gene': 'FP248', 'score': 6.69}, {'connected_gene': 'MROH5', 'score': 0.21}]
chr8	GH08I141433	141433707	141434497	0.77	[{'connected_gene': 'FP248', 'score': 555.86}, {'connected_gene': 'TSNARE1', 'score': 9.66}, {'connected_gene': 'PTK2', 'score': 4.96}, {'connected_gene': 'PIR43419', 'score': 0.34}, {'connected_gene': 'MROH5', 'score': 0.19}]
chr8	GH08I141473	141473230	141473930	0.43	[{'connected_gene': 'FP248', 'score': 5.21}, {'connected_gene': 'HNRNPA1P38', 'score': 0.39}, {'connected_gene': 'MROH5', 'score': 0.29}]