PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000229447	[[150690027, 150690345], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150716590, 150716702], [150719190, 150725764]]	[[150690167, 150690345], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150716590, 150716702], [150719190, 150719273]]
ENST00000344419	[[150690027, 150690345], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150719190, 150727105]]	[[150690167, 150690345], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150719190, 150719373]]
ENST00000392256	[[150690088, 150690345], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150716529, 150716590], [150719190, 150719245]]	[[150690167, 150690345], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150716529, 150716586]]
ENST00000367335	[[150690088, 150690345], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150716529, 150716702], [150719190, 150719245]]	[[150690167, 150690345], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150716529, 150716586]]
ENST00000392255	[[150690132, 150690345], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150716590, 150716702], [150717606, 150717952]]	[[150690167, 150690345], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150716590, 150716702], [150717606, 150717620]]
ENST00000500320	[[150690132, 150690345], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150716590, 150718026]]	[[150690167, 150690345], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150716590, 150716758]]
ENST00000546121	[[150690224, 150690345], [150710487, 150710766]]	None
ENST00000422583	[[150690290, 150690345], [150710487, 150710611], [150713480, 150713640], [150715234, 150715391], [150719190, 150719245]]	[[150690290, 150690345], [150710487, 150710611], [150713480, 150713571]]
ENST00000425615	[[150691112, 150691148], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150716529, 150716668]]	[[150691135, 150691148], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150716529, 150716586]]
NM_001318495	[[150690027, 150690345], [150710487, 150710611], [150713480, 150713640], [150715234, 150715391], [150719190, 150725765]]	[[150710487, 150710611], [150713480, 150713640], [150715234, 150715391], [150719190, 150719373]]
NM_203395	[[150690027, 150690345], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150719190, 150725765]]	[[150690167, 150690345], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150719190, 150719373]]
NM_001164694	[[150690027, 150690345], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150716590, 150716702], [150719190, 150725765]]	[[150690167, 150690345], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150716590, 150716702], [150719190, 150719273]]
NM_001164695	[[150690027, 150690345], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150716529, 150716590], [150719190, 150725765]]	[[150690167, 150690345], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150716529, 150716586]]
NR_134655	[[150690027, 150690345], [150710487, 150710679], [150713480, 150713640], [150715234, 150715391], [150716529, 150716702], [150719190, 150725765]]	None

Promoter

Chrom	Start	End	Description
chr6	150690053	150690058	CAGE_peak_3_at_IYD_5end
chr6	150690089	150690094	CAGE_peak_4_at_IYD_5end
chr6	150690140	150690175	CAGE_peak_1_at_IYD_5end
chr6	150690192	150690209	CAGE_peak_2_at_IYD_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I150200	150200505	150203258	0.88	[{'connected_gene': 'PPP1R14C', 'score': 20.79}, {'connected_gene': 'ENSG00000238594', 'score': 11.92}, {'connected_gene': 'RNU4-7P', 'score': 11.9}, {'connected_gene': 'IYD', 'score': 10.16}, {'connected_gene': 'LOC105378054', 'score': 0.2}, {'connected_gene': 'GC06M150158', 'score': 0.1}]
chr6	GH06I150072	150071001	150071600	1.03	[{'connected_gene': 'PPP1R14C', 'score': 11.04}, {'connected_gene': 'IYD', 'score': 10.53}, {'connected_gene': 'ULBP3', 'score': 0.77}]
chr6	GH06I150156	150156172	150157580	0.69	[{'connected_gene': 'PPP1R14C', 'score': 8.9}, {'connected_gene': 'IYD', 'score': 8.82}, {'connected_gene': 'ENSG00000238594', 'score': 0.44}]
chr6	GH06I150071	150071814	150072787	1.04	[{'connected_gene': 'ULBP3', 'score': 11.37}, {'connected_gene': 'PPP1R14C', 'score': 11.04}, {'connected_gene': 'IYD', 'score': 10.53}]
chr6	GH06I150296	150296609	150298517	0.99	[{'connected_gene': 'RNU4-7P', 'score': 12.27}, {'connected_gene': 'LATS1', 'score': 11.66}, {'connected_gene': 'IYD', 'score': 11.05}, {'connected_gene': 'RAET1E', 'score': 9.15}, {'connected_gene': 'BTF3P10', 'score': 4.75}, {'connected_gene': 'GC06M150327', 'score': 0.31}, {'connected_gene': 'LOC105378054', 'score': 0.31}, {'connected_gene': 'GC06M150158', 'score': 0.2}]
chr6	GH06I150080	150080745	150080934	0.69	[{'connected_gene': 'RNU4-7P', 'score': 11.35}, {'connected_gene': 'PPP1R14C', 'score': 11.12}, {'connected_gene': 'ENSG00000238594', 'score': 10.92}, {'connected_gene': 'IYD', 'score': 10.7}, {'connected_gene': 'ULBP3', 'score': 0.39}]
chr6	GH06I150292	150292024	150294611	1.25	[{'connected_gene': 'RNU4-7P', 'score': 12.25}, {'connected_gene': 'IYD', 'score': 11.04}, {'connected_gene': 'RAET1E', 'score': 10.26}, {'connected_gene': 'LOC105378054', 'score': 0.34}, {'connected_gene': 'GC06M150327', 'score': 0.29}, {'connected_gene': 'GC06M150158', 'score': 0.2}]
chr6	GH06I150299	150299465	150303496	0.95	[{'connected_gene': 'RNU4-7P', 'score': 12.9}, {'connected_gene': 'IYD', 'score': 10.73}, {'connected_gene': 'GC06M150327', 'score': 0.31}, {'connected_gene': 'LOC105378054', 'score': 0.29}, {'connected_gene': 'GC06M150158', 'score': 0.21}]
chr6	GH06I150403	150403140	150404219	1.1	[{'connected_gene': 'IYD', 'score': 16.34}, {'connected_gene': 'AKAP12', 'score': 10.74}, {'connected_gene': 'ENSG00000202343', 'score': 10.65}, {'connected_gene': 'RPS18P9', 'score': 10.22}, {'connected_gene': 'SSR1P1', 'score': 0.37}, {'connected_gene': 'LOC100420304', 'score': 0.14}]
chr6	GH06I150230	150230846	150233220	0.46	[{'connected_gene': 'IYD', 'score': 10.35}, {'connected_gene': 'PPP1R14C', 'score': 5.85}, {'connected_gene': 'LOC105378054', 'score': 0.28}, {'connected_gene': 'ENSG00000238594', 'score': 0.2}, {'connected_gene': 'GC06M150158', 'score': 0.12}]
chr6	GH06I150152	150152825	150155038	0.94	[{'connected_gene': 'IYD', 'score': 9.86}, {'connected_gene': 'PPP1R14C', 'score': 9.26}, {'connected_gene': 'ENSG00000238594', 'score': 0.39}]
chr6	GH06I150778	150778012	150779539	0.31	[{'connected_gene': 'IYD', 'score': 9.83}, {'connected_gene': 'PDCL3P5', 'score': 0.25}, {'connected_gene': 'ENSG00000226599', 'score': 0.13}, {'connected_gene': 'PLEKHG1', 'score': 0.1}]
chr6	GH06I150478	150478387	150480206	0.2	[{'connected_gene': 'IYD', 'score': 10.13}, {'connected_gene': 'RAET1E', 'score': 9.45}, {'connected_gene': 'PPIL4', 'score': 5.3}, {'connected_gene': 'LOC100420304', 'score': 0.29}, {'connected_gene': 'SSR1P1', 'score': 0.16}]
chr6	GH06I150229	150229865	150230014	0.79	[{'connected_gene': 'IYD', 'score': 10.12}, {'connected_gene': 'LOC105378054', 'score': 0.28}, {'connected_gene': 'ENSG00000238594', 'score': 0.2}, {'connected_gene': 'PPP1R14C', 'score': 0.17}, {'connected_gene': 'GC06M150158', 'score': 0.12}]
chr6	GH06I150395	150395525	150395654	0.69	[{'connected_gene': 'IYD', 'score': 11.95}, {'connected_gene': 'SSR1P1', 'score': 0.39}, {'connected_gene': 'LOC100420304', 'score': 0.14}]
chr6	GH06I150528	150528265	150529339	0.91	[{'connected_gene': 'IYD', 'score': 10.18}, {'connected_gene': 'LOC100420304', 'score': 0.37}, {'connected_gene': 'PLEKHG1', 'score': 0.19}]
chr6	GH06I150451	150451903	150453786	0.8	[{'connected_gene': 'IYD', 'score': 10.05}, {'connected_gene': 'LOC100420304', 'score': 0.22}, {'connected_gene': 'SSR1P1', 'score': 0.2}]
chr6	GH06I150368	150368013	150369584	1.22	[{'connected_gene': 'IYD', 'score': 550.77}, {'connected_gene': 'GC06M150158', 'score': 0.44}]
chr6	GH06I150373	150373245	150373394	0.38	[{'connected_gene': 'IYD', 'score': 0.77}, {'connected_gene': 'GC06P150383', 'score': 0.44}]
chr6	GH06I150383	150383791	150384154	0.23	[{'connected_gene': 'SSR1P1', 'score': 550.77}, {'connected_gene': 'GC06P150383', 'score': 550.77}, {'connected_gene': 'IYD', 'score': 14.49}, {'connected_gene': 'ENSG00000238594', 'score': 10.64}]
chr6	GH06I150731	150731334	150737002	0.72	[{'connected_gene': 'ENSG00000232891', 'score': 11.35}, {'connected_gene': 'PLEKHG1', 'score': 11.35}, {'connected_gene': 'IYD', 'score': 10.28}, {'connected_gene': 'ENSG00000226599', 'score': 0.18}, {'connected_gene': 'PDCL3P5', 'score': 0.16}]