PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000317802	[[54480314, 54483409]]	[[54482055, 54483288]]
NM_001003937	[[54480314, 54483409]]	[[54482055, 54483288]]

Promoter

Chrom	Start	End	Description
chr2	54483339	54483348	CAGE_peak_2_at_TSPYL6_5end
chr2	54483352	54483376	CAGE_peak_1_at_TSPYL6_5end
chr2	54483384	54483393	CAGE_peak_3_at_TSPYL6_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I054046	54046804	54048100	0.66	[{'connected_gene': 'ACYP2', 'score': 24.13}, {'connected_gene': 'TSPYL6', 'score': 9.65}, {'connected_gene': 'HMGB1P31', 'score': 0.77}, {'connected_gene': 'RPL21P30', 'score': 0.37}]
chr2	GH02I054041	54041828	54045458	1.57	[{'connected_gene': 'ACYP2', 'score': 31.81}, {'connected_gene': 'RNU7-172P', 'score': 10.1}, {'connected_gene': 'EML6', 'score': 9.83}, {'connected_gene': 'TSPYL6', 'score': 9.65}, {'connected_gene': 'HMGB1P31', 'score': 7.15}, {'connected_gene': 'GPR75', 'score': 3.76}, {'connected_gene': 'RPL21P30', 'score': 0.39}]
chr2	GH02I054272	54272000	54272389	0.59	[{'connected_gene': 'ACYP2', 'score': 6.3}, {'connected_gene': 'LOC105374610', 'score': 0.44}, {'connected_gene': 'TSPYL6', 'score': 0.37}]
chr2	GH02I054486	54486621	54495411	0.71	[{'connected_gene': 'SPTBN1', 'score': 26.27}, {'connected_gene': 'EML6', 'score': 21.93}, {'connected_gene': 'LOC105374667', 'score': 14.11}, {'connected_gene': 'TSPYL6', 'score': 10.84}, {'connected_gene': 'RNU7-172P', 'score': 10.54}, {'connected_gene': 'ACYP2', 'score': 10.3}, {'connected_gene': 'C2orf73', 'score': 10.16}, {'connected_gene': 'RNU7-81P', 'score': 10.13}, {'connected_gene': 'PRORSD1P', 'score': 5.06}, {'connected_gene': 'GC02M054483', 'score': 0.44}, {'connected_gene': 'GC02P054516', 'score': 0.31}]
chr2	GH02I054335	54335708	54337597	0.38	[{'connected_gene': 'SPTBN1', 'score': 11.3}, {'connected_gene': 'TSPYL6', 'score': 10.53}, {'connected_gene': 'ACYP2', 'score': 10.08}, {'connected_gene': 'RNU7-172P', 'score': 9.85}, {'connected_gene': 'C2orf73', 'score': 8.12}, {'connected_gene': 'GC02P054340', 'score': 0.77}]
chr2	GH02I054482	54482158	54484577	0.96	[{'connected_gene': 'SPTBN1', 'score': 25.72}, {'connected_gene': 'TSPYL6', 'score': 10.84}, {'connected_gene': 'RNU7-172P', 'score': 10.54}, {'connected_gene': 'PRORSD1P', 'score': 5.03}, {'connected_gene': 'GC02M054483', 'score': 0.77}, {'connected_gene': 'GC02P054478', 'score': 0.77}]
chr2	GH02I054465	54465758	54466360	0.2	[{'connected_gene': 'SPTBN1', 'score': 11.99}, {'connected_gene': 'C2orf73', 'score': 11.26}, {'connected_gene': 'TSPYL6', 'score': 10.0}, {'connected_gene': 'GC02P054478', 'score': 0.39}]
chr2	GH02I054509	54509620	54511877	0.2	[{'connected_gene': 'EML6', 'score': 14.78}, {'connected_gene': 'SPTBN1', 'score': 11.09}, {'connected_gene': 'ACYP2', 'score': 11.01}, {'connected_gene': 'TSPYL6', 'score': 10.35}, {'connected_gene': 'C2orf73', 'score': 10.18}, {'connected_gene': 'GC02P054516', 'score': 0.44}, {'connected_gene': 'GC02M054483', 'score': 0.34}]
chr2	GH02I054290	54290101	54291228	0.2	[{'connected_gene': 'TSPYL6', 'score': 21.15}, {'connected_gene': 'ACYP2', 'score': 15.55}, {'connected_gene': 'C2orf73', 'score': 11.17}, {'connected_gene': 'ENSG00000272156', 'score': 5.69}, {'connected_gene': 'GC02P054297', 'score': 0.44}, {'connected_gene': 'GC02P054285', 'score': 0.44}]
chr2	GH02I054256	54256219	54256278	1.08	[{'connected_gene': 'TSPYL6', 'score': 550.77}, {'connected_gene': 'GC02P054224', 'score': 0.29}, {'connected_gene': 'ACYP2', 'score': 0.06}]
chr2	GH02I054207	54207211	54209342	1.12	[{'connected_gene': 'TSPYL6', 'score': 19.82}, {'connected_gene': 'SPTBN1', 'score': 10.95}, {'connected_gene': 'RNU7-172P', 'score': 10.91}, {'connected_gene': 'C2orf73', 'score': 10.2}, {'connected_gene': 'ACYP2', 'score': 6.77}, {'connected_gene': 'GC02M054187', 'score': 0.44}, {'connected_gene': 'GC02M054119', 'score': 0.31}]
chr2	GH02I054212	54212084	54213217	0.63	[{'connected_gene': 'TSPYL6', 'score': 20.04}, {'connected_gene': 'RNU7-172P', 'score': 10.63}, {'connected_gene': 'ACYP2', 'score': 10.62}, {'connected_gene': 'C2orf73', 'score': 10.4}, {'connected_gene': 'GC02M054187', 'score': 0.44}, {'connected_gene': 'GC02M054119', 'score': 0.29}]
chr2	GH02I054226	54226250	54226818	0.52	[{'connected_gene': 'TSPYL6', 'score': 12.06}, {'connected_gene': 'RNU7-172P', 'score': 10.28}, {'connected_gene': 'ACYP2', 'score': 8.41}, {'connected_gene': 'GC02P054224', 'score': 0.77}]
chr2	GH02I054238	54238892	54241191	0.49	[{'connected_gene': 'TSPYL6', 'score': 44.1}, {'connected_gene': 'RNU7-172P', 'score': 10.68}, {'connected_gene': 'C2orf73', 'score': 10.32}, {'connected_gene': 'ACYP2', 'score': 7.24}, {'connected_gene': 'GC02P054224', 'score': 0.37}]
chr2	GH02I054274	54274331	54275600	0.78	[{'connected_gene': 'C2orf73', 'score': 15.48}, {'connected_gene': 'ACYP2', 'score': 14.77}, {'connected_gene': 'LOC105374610', 'score': 0.77}, {'connected_gene': 'TSPYL6', 'score': 0.37}]
chr2	GH02I054463	54463401	54463600	0.4	[{'connected_gene': 'C2orf73', 'score': 11.26}, {'connected_gene': 'SPTBN1', 'score': 10.91}, {'connected_gene': 'TSPYL6', 'score': 10.0}, {'connected_gene': 'EML6', 'score': 8.08}, {'connected_gene': 'GC02P054478', 'score': 0.37}]
chr2	GH02I054460	54460040	54461652	0.69	[{'connected_gene': 'C2orf73', 'score': 11.26}, {'connected_gene': 'SPTBN1', 'score': 10.04}, {'connected_gene': 'TSPYL6', 'score': 10.0}, {'connected_gene': 'EML6', 'score': 9.38}, {'connected_gene': 'GC02P054478', 'score': 0.37}]
chr2	GH02I054464	54464801	54465400	0.4	[{'connected_gene': 'C2orf73', 'score': 11.26}, {'connected_gene': 'TSPYL6', 'score': 10.0}, {'connected_gene': 'SPTBN1', 'score': 0.44}, {'connected_gene': 'GC02P054478', 'score': 0.39}]
chr2	GH02I054121	54121092	54124106	1	[{'connected_gene': 'RNU7-172P', 'score': 11.01}, {'connected_gene': 'TSPYL6', 'score': 10.18}, {'connected_gene': 'ENSG00000272156', 'score': 6.37}, {'connected_gene': 'HMGB1P31', 'score': 6.08}, {'connected_gene': 'ACYP2', 'score': 5.12}, {'connected_gene': 'LOC105374615', 'score': 0.37}, {'connected_gene': 'GC02M054119', 'score': 0.22}]
chr2	GH02I054241	54241204	54241307	0.2	[{'connected_gene': 'RNU7-172P', 'score': 10.68}, {'connected_gene': 'C2orf73', 'score': 10.32}, {'connected_gene': 'TSPYL6', 'score': 0.37}, {'connected_gene': 'GC02P054224', 'score': 0.37}, {'connected_gene': 'ACYP2', 'score': 0.06}]
chr2	GH02I054750	54750427	54750574	0.33	[{'connected_gene': 'LOC105374667', 'score': 550.77}, {'connected_gene': 'TSPYL6', 'score': 14.12}, {'connected_gene': 'EML6', 'score': 10.75}, {'connected_gene': 'C2orf73', 'score': 10.43}, {'connected_gene': 'GC02M054734', 'score': 0.39}]
chr2	GH02I054434	54434192	54435412	0.51	[{'connected_gene': 'LOC102724072', 'score': 550.77}, {'connected_gene': 'C2orf73', 'score': 10.35}, {'connected_gene': 'TSPYL6', 'score': 10.1}, {'connected_gene': 'RNU7-172P', 'score': 10.07}, {'connected_gene': 'SPTBN1', 'score': 0.34}]
chr2	GH02I054435	54435557	54436242	0.2	[{'connected_gene': 'LOC102724072', 'score': 550.77}, {'connected_gene': 'C2orf73', 'score': 10.35}, {'connected_gene': 'TSPYL6', 'score': 10.1}, {'connected_gene': 'RNU7-172P', 'score': 10.07}, {'connected_gene': 'SPTBN1', 'score': 0.34}]