PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000388718	[[152321210, 152330123], [152331222, 152331382], [152332431, 152332482]]	[[152323085, 152330123], [152331222, 152331360]]
NM_001014342	[[152321212, 152330123], [152331222, 152331382], [152332431, 152332482]]	[[152323085, 152330123], [152331222, 152331360]]

Promoter

Chrom	Start	End	Description
chr1	152332480	152332484	CAGE_peak_1_at_FLG2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I152392	152392945	152393094	0.89	[{'connected_gene': 'MRPL9', 'score': 28.86}, {'connected_gene': 'POGZ', 'score': 19.92}, {'connected_gene': 'RPS10P6', 'score': 11.79}, {'connected_gene': 'FLG2', 'score': 10.84}, {'connected_gene': 'HRNR', 'score': 9.88}, {'connected_gene': 'PSMB4', 'score': 9.88}, {'connected_gene': 'FLG', 'score': 9.8}, {'connected_gene': 'HMGN3P1', 'score': 0.44}, {'connected_gene': 'GC01P152378', 'score': 0.39}, {'connected_gene': 'FLG-AS1', 'score': 0.07}]
chr1	GH01I152412	152412731	152413709	0.2	[{'connected_gene': 'CRNN', 'score': 550.77}, {'connected_gene': 'FLG2', 'score': 9.99}, {'connected_gene': 'FLG', 'score': 9.01}, {'connected_gene': 'GC01P152408', 'score': 0.77}, {'connected_gene': 'FLG-AS1', 'score': 0.07}]
chr1	GH01I152458	152458505	152458654	0.64	[{'connected_gene': 'FLG2', 'score': 10.08}, {'connected_gene': 'CRCT1', 'score': 9.9}, {'connected_gene': 'RPTN', 'score': 9.34}, {'connected_gene': 'PIR42758', 'score': 0.28}, {'connected_gene': 'LCE5A', 'score': 0.23}]
chr1	GH01I152359	152359996	152360055	0.5	[{'connected_gene': 'FLG2', 'score': 550.77}, {'connected_gene': 'GC01P152378', 'score': 0.37}, {'connected_gene': 'FLG-AS1', 'score': 0.08}]
chr1	GH01I152446	152446218	152451632	0.38	[{'connected_gene': 'FLG', 'score': 17.39}, {'connected_gene': 'S100A11', 'score': 14.89}, {'connected_gene': 'CRNN', 'score': 13.2}, {'connected_gene': 'FLG2', 'score': 10.28}, {'connected_gene': 'HRNR', 'score': 10.1}, {'connected_gene': 'FLG-AS1', 'score': 5.23}, {'connected_gene': 'PIR42758', 'score': 0.31}, {'connected_gene': 'LCE5A', 'score': 0.21}]
chr1	GH01I152426	152426925	152428489	0.31	[{'connected_gene': 'FLG', 'score': 15.98}, {'connected_gene': 'CRNN', 'score': 13.12}, {'connected_gene': 'FLG2', 'score': 10.66}, {'connected_gene': 'HRNR', 'score': 9.83}, {'connected_gene': 'RPTN', 'score': 9.71}, {'connected_gene': 'PIR42758', 'score': 0.44}, {'connected_gene': 'LCE5A', 'score': 0.18}, {'connected_gene': 'FLG-AS1', 'score': 0.07}]
chr1	GH01I152409	152409438	152412682	0.31	[{'connected_gene': 'FLG', 'score': 15.09}, {'connected_gene': 'CRNN', 'score': 11.14}, {'connected_gene': 'FLG2', 'score': 9.99}, {'connected_gene': 'FLG-AS1', 'score': 6.18}, {'connected_gene': 'GC01P152408', 'score': 0.77}]
chr1	GH01I152229	152229005	152229114	0.31	[{'connected_gene': 'ENSG00000236427', 'score': 11.21}, {'connected_gene': 'FLG', 'score': 9.97}, {'connected_gene': 'TCHH', 'score': 9.79}, {'connected_gene': 'FLG2', 'score': 9.62}, {'connected_gene': 'HRNR', 'score': 0.77}, {'connected_gene': 'FLG-AS1', 'score': 0.21}, {'connected_gene': 'PIR46233', 'score': 0.19}]