PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000368250	[[128029216, 128031161], [128040832, 128040968], [128134027, 128135076], [128150620, 128151079], [128176174, 128176333], [128221986, 128222226], [128239572, 128239685]]	[[128031129, 128031161], [128040832, 128040968], [128134027, 128135076], [128150620, 128151079], [128176174, 128176187]]
ENST00000368248	[[128029338, 128031161], [128040832, 128040968], [128134027, 128135076], [128150620, 128151079], [128176174, 128176333], [128221986, 128222226]]	[[128031129, 128031161], [128040832, 128040968], [128134027, 128135076], [128150620, 128151079], [128176174, 128176333], [128221986, 128222077]]
ENST00000543064	[[128029338, 128031161], [128040832, 128040968], [128128360, 128128477], [128134027, 128135076], [128150620, 128151079], [128176174, 128176333], [128221986, 128222226]]	[[128031129, 128031161], [128040832, 128040968], [128128360, 128128477], [128134027, 128135076], [128150620, 128151079], [128176174, 128176333], [128221986, 128222077]]
ENST00000537166	[[128029338, 128031161], [128040832, 128040968], [128134027, 128135076], [128150620, 128151079], [128176174, 128176333], [128239572, 128239776]]	[[128031129, 128031161], [128040832, 128040968], [128134027, 128135076], [128150620, 128151079], [128176174, 128176319]]
ENST00000434358	[[128134721, 128135076], [128176174, 128176333], [128221986, 128222103]]	[[128134721, 128135076], [128176174, 128176187]]
NM_001318531	[[128029338, 128031161], [128040832, 128040968], [128134027, 128135076], [128150620, 128151079], [128163052, 128163232], [128173040, 128173165], [128176174, 128176333]]	[[128031129, 128031161], [128040832, 128040968], [128134027, 128135076], [128150620, 128151038]]
NM_001164685	[[128029338, 128031161], [128040832, 128040968], [128128360, 128128477], [128134027, 128135076], [128150620, 128151079], [128176174, 128176333], [128221986, 128222226]]	[[128031129, 128031161], [128040832, 128040968], [128128360, 128128477], [128134027, 128135076], [128150620, 128151079], [128176174, 128176333], [128221986, 128222077]]
NM_001010923	[[128029338, 128031161], [128040832, 128040968], [128134027, 128135076], [128150620, 128151079], [128176174, 128176333], [128221986, 128222226]]	[[128031129, 128031161], [128040832, 128040968], [128134027, 128135076], [128150620, 128151079], [128176174, 128176333], [128221986, 128222077]]
NM_001164687	[[128029338, 128031161], [128040832, 128040968], [128134027, 128135076], [128150620, 128151079], [128176174, 128176333], [128239572, 128239776]]	[[128031129, 128031161], [128040832, 128040968], [128134027, 128135076], [128150620, 128151079], [128176174, 128176319]]

Promoter

Chrom	Start	End	Description
chr6	128134176	128134183	CAGE_peak_10_at_THEMIS_5end
chr6	128134199	128134253	CAGE_peak_3_at_THEMIS_5end
chr6	128222186	128222217	CAGE_peak_1_at_THEMIS_5end
chr6	128222238	128222249	CAGE_peak_5_at_THEMIS_5end
chr6	128239704	128239722	CAGE_peak_4_at_THEMIS_5end
chr6	128239732	128239745	CAGE_peak_2_at_THEMIS_5end
chr6	128239749	128239760	CAGE_peak_6_at_THEMIS_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I127914	127914838	127915729	0.2	[{'connected_gene': 'THEMIS', 'score': 0.77}, {'connected_gene': 'MRPS17P5', 'score': 0.44}]
chr6	GH06I127898	127898520	127902351	1.21	[{'connected_gene': 'THEMIS', 'score': 550.37}, {'connected_gene': 'GC06M127888', 'score': 0.44}, {'connected_gene': 'MRPS17P5', 'score': 0.44}]
chr6	GH06I127857	127857007	127858301	0.4	[{'connected_gene': 'THEMIS', 'score': 5.85}, {'connected_gene': 'GC06M127888', 'score': 0.29}, {'connected_gene': 'LINC02536', 'score': 0.08}]
chr6	GH06I127737	127737076	127737305	0.8	[{'connected_gene': 'THEMIS', 'score': 4.23}, {'connected_gene': 'LINC02536', 'score': 0.19}, {'connected_gene': 'GC06M127888', 'score': 0.1}]
chr6	GH06I127759	127759139	127759535	0.22	[{'connected_gene': 'THEMIS', 'score': 1.88}, {'connected_gene': 'LINC02536', 'score': 0.15}, {'connected_gene': 'GC06M127888', 'score': 0.12}]
chr6	GH06I127866	127866965	127867548	0.2	[{'connected_gene': 'THEMIS', 'score': 5.65}, {'connected_gene': 'GC06M127888', 'score': 0.34}, {'connected_gene': 'LINC02536', 'score': 0.08}]
chr6	GH06I127855	127855696	127855845	0.69	[{'connected_gene': 'THEMIS', 'score': 5.82}, {'connected_gene': 'GC06M127888', 'score': 0.28}, {'connected_gene': 'LINC02536', 'score': 0.08}]
chr6	GH06I127862	127862443	127862502	0.5	[{'connected_gene': 'THEMIS', 'score': 550.22}, {'connected_gene': 'GC06M127888', 'score': 0.31}, {'connected_gene': 'LINC02536', 'score': 0.08}]
chr6	GH06I127864	127864609	127865718	0.38	[{'connected_gene': 'THEMIS', 'score': 6.06}, {'connected_gene': 'GC06M127888', 'score': 0.31}, {'connected_gene': 'LINC02536', 'score': 0.08}]
chr6	GH06I127933	127933861	127935682	0.66	[{'connected_gene': 'THEMIS', 'score': 7.56}, {'connected_gene': 'LOC101928140', 'score': 4.34}, {'connected_gene': 'GC06P127982', 'score': 0.25}]
chr6	GH06I127938	127938341	127940001	1.11	[{'connected_gene': 'THEMIS', 'score': 0.34}, {'connected_gene': 'GC06P127982', 'score': 0.26}]
chr6	GH06I127921	127921827	127922539	0.2	[{'connected_gene': 'THEMIS', 'score': 0.77}, {'connected_gene': 'GC06P127982', 'score': 0.22}]
chr6	GH06I127918	127918369	127919549	0.9	[{'connected_gene': 'THEMIS', 'score': 550.77}, {'connected_gene': 'GC06P127982', 'score': 0.21}]
chr6	GH06I127922	127922584	127923742	0.2	[{'connected_gene': 'THEMIS', 'score': 0.77}, {'connected_gene': 'GC06P127982', 'score': 0.22}]
chr6	GH06I127906	127906066	127910194	0.59	[{'connected_gene': 'MRPS17P5', 'score': 550.77}, {'connected_gene': 'THEMIS', 'score': 0.39}, {'connected_gene': 'GC06M127888', 'score': 0.37}]
chr6	GH06I127903	127903673	127904667	0.2	[{'connected_gene': 'MRPS17P5', 'score': 0.44}, {'connected_gene': 'THEMIS', 'score': 0.39}, {'connected_gene': 'GC06M127888', 'score': 0.39}]
chr6	GH06I127970	127970860	127974261	1.05	[{'connected_gene': 'LOC101928140', 'score': 11.14}, {'connected_gene': 'GC06P127982', 'score': 0.44}, {'connected_gene': 'THEMIS', 'score': 0.23}, {'connected_gene': 'PTPRK', 'score': 0.03}]
chr6	GH06I127967	127967432	127970538	0.2	[{'connected_gene': 'LOC101928140', 'score': 11.14}, {'connected_gene': 'GC06P127982', 'score': 0.39}, {'connected_gene': 'THEMIS', 'score': 0.23}, {'connected_gene': 'PTPRK', 'score': 0.03}]
chr6	GH06I127869	127869870	127870403	0.31	[{'connected_gene': 'LOC101928140', 'score': 9.85}, {'connected_gene': 'GC06M127888', 'score': 0.34}, {'connected_gene': 'THEMIS', 'score': 0.25}, {'connected_gene': 'LINC02536', 'score': 0.08}]
chr6	GH06I127952	127952721	127953445	0.2	[{'connected_gene': 'LOC101928140', 'score': 10.76}, {'connected_gene': 'GC06P127982', 'score': 0.31}, {'connected_gene': 'THEMIS', 'score': 0.29}]
chr6	GH06I127953	127953598	127955417	0.38	[{'connected_gene': 'LOC101928140', 'score': 10.76}, {'connected_gene': 'GC06P127982', 'score': 0.31}, {'connected_gene': 'THEMIS', 'score': 0.28}]
chr6	GH06I127944	127944997	127946750	0.46	[{'connected_gene': 'LOC101928140', 'score': 10.44}, {'connected_gene': 'THEMIS', 'score': 0.31}, {'connected_gene': 'GC06P127982', 'score': 0.29}]
chr6	GH06I127950	127950504	127952491	0.86	[{'connected_gene': 'LOC101928140', 'score': 10.75}, {'connected_gene': 'GC06P127982', 'score': 0.31}, {'connected_gene': 'THEMIS', 'score': 0.29}]
chr6	GH06I127880	127880596	127880745	0.4	[{'connected_gene': 'GC06M127888', 'score': 0.39}, {'connected_gene': 'THEMIS', 'score': 0.28}, {'connected_gene': 'LINC02536', 'score': 0.08}]
chr6	GH06I127879	127879601	127880000	0.89	[{'connected_gene': 'GC06M127888', 'score': 0.39}, {'connected_gene': 'THEMIS', 'score': 0.28}, {'connected_gene': 'LINC02536', 'score': 0.08}]
chr6	GH06I127875	127875973	127876873	0.2	[{'connected_gene': 'GC06M127888', 'score': 0.39}, {'connected_gene': 'THEMIS', 'score': 0.26}, {'connected_gene': 'LINC02536', 'score': 0.08}]
chr6	GH06I127885	127885885	127887127	0.2	[{'connected_gene': 'GC06M127888', 'score': 0.77}, {'connected_gene': 'THEMIS', 'score': 0.29}, {'connected_gene': 'LINC02536', 'score': 0.07}]
chr6	GH06I127860	127860005	127860954	0.2	[{'connected_gene': 'GC06M127888', 'score': 0.29}, {'connected_gene': 'THEMIS', 'score': 0.22}, {'connected_gene': 'LINC02536', 'score': 0.08}]
chr6	GH06I127883	127883394	127885125	0.2	[{'connected_gene': 'GC06M127888', 'score': 0.44}, {'connected_gene': 'THEMIS', 'score': 0.29}, {'connected_gene': 'LINC02536', 'score': 0.07}]
chr6	GH06I127893	127893601	127893800	0.4	[{'connected_gene': 'GC06M127888', 'score': 0.77}, {'connected_gene': 'MRPS17P5', 'score': 0.37}, {'connected_gene': 'THEMIS', 'score': 0.34}]
chr6	GH06I127895	127895824	127898404	0.2	[{'connected_gene': 'GC06M127888', 'score': 0.44}, {'connected_gene': 'MRPS17P5', 'score': 0.39}, {'connected_gene': 'THEMIS', 'score': 0.34}]
chr6	GH06I127896	127894986	127895736	0.2	[{'connected_gene': 'GC06M127888', 'score': 0.77}, {'connected_gene': 'MRPS17P5', 'score': 0.39}, {'connected_gene': 'THEMIS', 'score': 0.34}]
chr6	GH06I127894	127894340	127894974	0.2	[{'connected_gene': 'GC06M127888', 'score': 0.77}, {'connected_gene': 'MRPS17P5', 'score': 0.37}, {'connected_gene': 'THEMIS', 'score': 0.34}]