PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000368491	[[118781934, 118786731], [118790234, 118790466], [118791699, 118791807], [118801033, 118801084], [118801558, 118801676], [118802941, 118803096], [118804868, 118805021], [118812848, 118813028], [118832460, 118832578], [118844964, 118845083], [118886691, 118887479], [118953615, 118953774], [118972359, 118973054]]	[[118786567, 118786731], [118790234, 118790466], [118791699, 118791807], [118801033, 118801084], [118801558, 118801676], [118802941, 118803096], [118804868, 118805021], [118812848, 118813028], [118832460, 118832578], [118844964, 118845083], [118886691, 118887479], [118953615, 118953774], [118972359, 118972432]]
ENST00000368488	[[118781943, 118786731], [118790234, 118790466], [118791699, 118791807], [118801033, 118801084], [118801558, 118801676], [118802941, 118803096], [118804868, 118805021], [118812848, 118813028], [118832460, 118832578], [118844964, 118845083], [118886691, 118887479], [118953615, 118953774], [118973862, 118973971], [119031198, 119031238]]	[[118786567, 118786731], [118790234, 118790466], [118791699, 118791807], [118801033, 118801084], [118801558, 118801676], [118802941, 118803096], [118804868, 118805021], [118812848, 118813028], [118832460, 118832578], [118844964, 118845083], [118886691, 118887479], [118953615, 118953774], [118973862, 118973944]]
ENST00000434604	[[118802965, 118803096], [118804868, 118805021], [118812848, 118813028], [118832460, 118832578], [118844964, 118845083], [118886691, 118887479], [118953615, 118953774], [118973862, 118973971], [119031198, 119031238]]	[[118802965, 118803096], [118804868, 118805021], [118812848, 118813028], [118832460, 118832578], [118844964, 118845083], [118886691, 118887479], [118953615, 118953774], [118973862, 118973944]]
ENST00000360290	[[118812593, 118813028], [118832460, 118832578], [118844964, 118845083], [118886691, 118887479], [118953615, 118953774], [118973566, 118973683]]	[[118812794, 118813028], [118832460, 118832578], [118844964, 118845083], [118886691, 118887405]]
ENST00000392500	[[118812593, 118813028], [118832460, 118832578], [118844964, 118845083], [118886691, 118887479], [118953615, 118953774], [118973862, 118973971], [118985573, 118985684], [119031198, 119031231]]	[[118812794, 118813028], [118832460, 118832578], [118844964, 118845083], [118886691, 118887479], [118953615, 118953774], [118973862, 118973944]]
ENST00000419517	[[118812794, 118813028], [118832460, 118832578], [118844964, 118845083], [118886691, 118887479], [118953615, 118953774], [118972359, 118973020]]	[[118812794, 118813028], [118832460, 118832578], [118844964, 118845083], [118886691, 118887479], [118953615, 118953774], [118972359, 118972432]]
ENST00000483035	[[118886197, 118887479], [118953615, 118953774], [118973566, 118973710]]	None
ENST00000472713	[[118886721, 118887479], [118895153, 118895231]]	None
ENST00000476150	[[118887217, 118887479], [118953615, 118953774], [118968069, 118968268]]	None
ENST00000462101	[[118887254, 118887479], [118953615, 118953774], [118968069, 118968102], [118968202, 118968268]]	None
ENST00000489276	[[118977925, 118978284], [118985573, 118985684]]	None
NM_001042475	[[118781934, 118786731], [118790234, 118790466], [118791699, 118791807], [118801033, 118801084], [118801558, 118801676], [118802941, 118803096], [118804868, 118805021], [118812848, 118813028], [118832460, 118832578], [118844964, 118845083], [118886691, 118887479], [118953615, 118953774], [118972359, 118973020]]	[[118786567, 118786731], [118790234, 118790466], [118791699, 118791807], [118801033, 118801084], [118801558, 118801676], [118802941, 118803096], [118804868, 118805021], [118812848, 118813028], [118832460, 118832578], [118844964, 118845083], [118886691, 118887479], [118953615, 118953774], [118972359, 118972432]]
NM_001178035	[[118781934, 118786731], [118790234, 118790466], [118791699, 118791807], [118801033, 118801084], [118801558, 118801676], [118802941, 118803096], [118804868, 118805021], [118812848, 118813028], [118832460, 118832578], [118844964, 118845083], [118886691, 118887479], [118953615, 118953774], [118973862, 118973971], [119031198, 119031238]]	[[118786567, 118786731], [118790234, 118790466], [118791699, 118791807], [118801033, 118801084], [118801558, 118801676], [118802941, 118803096], [118804868, 118805021], [118812848, 118813028], [118832460, 118832578], [118844964, 118845083], [118886691, 118887479], [118953615, 118953774], [118973862, 118973944]]
NM_206921	[[118812593, 118813028], [118832460, 118832578], [118844964, 118845083], [118886691, 118887479], [118953615, 118953774], [118972359, 118973020]]	[[118812794, 118813028], [118832460, 118832578], [118844964, 118845083], [118886691, 118887479], [118953615, 118953774], [118972359, 118972432]]

Promoter

Chrom	Start	End	Description
chr6	118895222	118895233	CAGE_peak_9_at_CEP85L_5end
chr6	118895247	118895267	CAGE_peak_4_at_CEP85L_5end
chr6	118895275	118895291	CAGE_peak_8_at_CEP85L_5end
chr6	118972685	118972768	CAGE_peak_1_at_CEP85L_5end
chr6	118972783	118972802	CAGE_peak_3_at_CEP85L_5end
chr6	118972814	118972825	CAGE_peak_5_at_CEP85L_5end
chr6	119031228	119031261	CAGE_peak_2_at_CEP85L_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I118548	118548249	118548308	0.99	[{'connected_gene': 'PLN', 'score': 550.77}, {'connected_gene': 'BRD7P3', 'score': 0.25}, {'connected_gene': 'CEP85L', 'score': 0.1}]
chr6	GH06I118576	118576093	118576410	0.24	[{'connected_gene': 'PLN', 'score': 11.8}, {'connected_gene': 'SSXP10', 'score': 0.39}, {'connected_gene': 'CEP85L', 'score': 0.12}]
chr6	GH06I118536	118536042	118538613	1.5	[{'connected_gene': 'PLN', 'score': 39.12}, {'connected_gene': 'SSXP10', 'score': 16.71}, {'connected_gene': 'BRD7P3', 'score': 0.28}, {'connected_gene': 'CEP85L', 'score': 0.09}]
chr6	GH06I118781	118781001	118781200	0.2	[{'connected_gene': 'CEP85L', 'score': 11.37}, {'connected_gene': 'FAM184A', 'score': 8.25}, {'connected_gene': 'SELENOKP3', 'score': 0.34}, {'connected_gene': 'ASF1A', 'score': 0.14}]
chr6	GH06I118743	118743432	118746853	0.66	[{'connected_gene': 'CEP85L', 'score': 11.89}, {'connected_gene': 'MCM9', 'score': 4.61}, {'connected_gene': 'SELENOKP3', 'score': 0.39}]
chr6	GH06I118707	118707766	118711208	2.45	[{'connected_gene': 'CEP85L', 'score': 562.0}, {'connected_gene': 'MCM9', 'score': 24.98}, {'connected_gene': 'SSXP10', 'score': 0.13}]
chr6	GH06I118509	118509022	118510310	0.46	[{'connected_gene': 'CEP85L', 'score': 5.54}, {'connected_gene': 'BRD7P3', 'score': 0.44}, {'connected_gene': 'PLN', 'score': 0.28}]
chr6	GH06I118787	118787303	118788668	0.76	[{'connected_gene': 'CEP85L', 'score': 11.21}, {'connected_gene': 'SELENOKP3', 'score': 9.72}, {'connected_gene': 'FAM184A', 'score': 6.14}, {'connected_gene': 'ASF1A', 'score': 0.14}]
chr6	GH06I118767	118767618	118769800	1.04	[{'connected_gene': 'CEP85L', 'score': 13.74}, {'connected_gene': 'SELENOKP3', 'score': 7.83}, {'connected_gene': 'FAM184A', 'score': 4.21}, {'connected_gene': 'MCM9', 'score': 2.43}, {'connected_gene': 'ASF1A', 'score': 0.13}]
chr6	GH06I118776	118776600	118776807	0.89	[{'connected_gene': 'CEP85L', 'score': 11.59}, {'connected_gene': 'SELENOKP3', 'score': 0.37}, {'connected_gene': 'ASF1A', 'score': 0.13}]
chr6	GH06I118773	118773078	118773227	0.2	[{'connected_gene': 'CEP85L', 'score': 10.61}, {'connected_gene': 'SELENOKP3', 'score': 0.37}, {'connected_gene': 'ASF1A', 'score': 0.13}]
chr6	GH06I118784	118784801	118785000	0.46	[{'connected_gene': 'CEP85L', 'score': 11.21}, {'connected_gene': 'SELENOKP3', 'score': 0.31}, {'connected_gene': 'ASF1A', 'score': 0.14}]
chr6	GH06I118718	118718878	118720731	0.97	[{'connected_gene': 'CEP85L', 'score': 0.44}, {'connected_gene': 'SELENOKP3', 'score': 0.28}]
chr6	GH06I118726	118726078	118726267	0.86	[{'connected_gene': 'CEP85L', 'score': 0.37}, {'connected_gene': 'SELENOKP3', 'score': 0.29}]
chr6	GH06I118736	118736317	118737646	0.43	[{'connected_gene': 'CEP85L', 'score': 12.97}, {'connected_gene': 'SELENOKP3', 'score': 0.34}]
chr6	GH06I118712	118712735	118713707	0.38	[{'connected_gene': 'CEP85L', 'score': 0.77}, {'connected_gene': 'SELENOKP3', 'score': 0.26}]
chr6	GH06I118723	118723462	118725209	0.43	[{'connected_gene': 'CEP85L', 'score': 0.39}, {'connected_gene': 'SELENOKP3', 'score': 0.29}]
chr6	GH06I118747	118747979	118749600	0.8	[{'connected_gene': 'CEP85L', 'score': 11.67}, {'connected_gene': 'SELENOKP3', 'score': 0.44}]
chr6	GH06I118649	118649161	118652552	2.16	[{'connected_gene': 'CEP85L', 'score': 555.21}, {'connected_gene': 'SSXP10', 'score': 14.72}, {'connected_gene': 'MCM9', 'score': 10.46}]
chr6	GH06I118668	118668195	118670216	0.83	[{'connected_gene': 'CEP85L', 'score': 5.39}, {'connected_gene': 'SSXP10', 'score': 0.18}]
chr6	GH06I118618	118618898	118619047	0.64	[{'connected_gene': 'CEP85L', 'score': 10.23}, {'connected_gene': 'SSXP10', 'score': 0.31}]
chr6	GH06I118679	118679600	118679800	0.38	[{'connected_gene': 'CEP85L', 'score': 11.72}, {'connected_gene': 'SSXP10', 'score': 0.16}]
chr6	GH06I118890	118890842	118897621	2.53	[{'connected_gene': 'ASF1A', 'score': 551.86}, {'connected_gene': 'MCM9', 'score': 27.06}, {'connected_gene': 'CEP85L', 'score': 13.32}, {'connected_gene': 'ENSG00000253194', 'score': 6.87}, {'connected_gene': 'FAM184A', 'score': 6.45}]
chr6	GH06I118800	118800029	118801322	1	[{'connected_gene': 'ASF1A', 'score': 11.08}, {'connected_gene': 'MCM9', 'score': 11.04}, {'connected_gene': 'CEP85L', 'score': 10.44}, {'connected_gene': 'SELENOKP3', 'score': 0.26}]
chr6	GH06I118659	118659550	118660886	1.28	[{'connected_gene': 'ASF1A', 'score': 23.3}, {'connected_gene': 'SSXP10', 'score': 14.85}, {'connected_gene': 'MCM9', 'score': 10.48}, {'connected_gene': 'NUS1', 'score': 10.22}, {'connected_gene': 'CEP85L', 'score': 0.25}]
chr6	GH06I118807	118807932	118811148	1	[{'connected_gene': 'MCM9', 'score': 21.53}, {'connected_gene': 'CEP85L', 'score': 20.32}, {'connected_gene': 'ASF1A', 'score': 11.1}, {'connected_gene': 'FAM184A', 'score': 6.03}, {'connected_gene': 'SELENOKP3', 'score': 0.23}]
chr6	GH06I118643	118643712	118643962	0.22	[{'connected_gene': 'MCM9', 'score': 2.15}, {'connected_gene': 'CEP85L', 'score': 1.53}, {'connected_gene': 'SSXP10', 'score': 0.23}]
chr6	GH06I118864	118864312	118865698	0.4	[{'connected_gene': 'MCM9', 'score': 19.35}, {'connected_gene': 'ASF1A', 'score': 11.58}, {'connected_gene': 'CEP85L', 'score': 9.63}, {'connected_gene': 'SELENOKP3', 'score': 0.14}]
chr6	GH06I118644	118644200	118644400	0.38	[{'connected_gene': 'MCM9', 'score': 10.41}, {'connected_gene': 'SSXP10', 'score': 0.22}, {'connected_gene': 'CEP85L', 'score': 0.2}]
chr6	GH06I118525	118525376	118526906	0.31	[{'connected_gene': 'BRD7P3', 'score': 0.34}, {'connected_gene': 'PLN', 'score': 0.34}, {'connected_gene': 'CEP85L', 'score': 0.09}]
chr6	GH06I118495	118495402	118496359	0.38	[{'connected_gene': 'BRD7P3', 'score': 0.44}, {'connected_gene': 'LOC105377971', 'score': 0.31}, {'connected_gene': 'CEP85L', 'score': 0.08}]
chr6	GH06I119260	119260637	119262400	1.19	[{'connected_gene': 'RNU6-194P', 'score': 11.18}, {'connected_gene': 'CEP85L', 'score': 9.97}, {'connected_gene': 'RPL13AP15', 'score': 5.29}, {'connected_gene': 'GC06P119180', 'score': 0.18}, {'connected_gene': 'MAN1A1', 'score': 0.16}]
chr6	GH06I118469	118469178	118469327	0.77	[{'connected_gene': 'LOC105377971', 'score': 0.77}, {'connected_gene': 'BRD7P3', 'score': 0.29}, {'connected_gene': 'CEP85L', 'score': 0.07}]
chr6	GH06I118780	118780401	118780800	0.2	[{'connected_gene': 'SELENOKP3', 'score': 13.76}, {'connected_gene': 'CEP85L', 'score': 11.37}, {'connected_gene': 'ASF1A', 'score': 0.14}]
chr6	GH06I118752	118752778	118752927	0.2	[{'connected_gene': 'SELENOKP3', 'score': 0.77}, {'connected_gene': 'CEP85L', 'score': 0.26}]
chr6	GH06I118510	118510943	118513791	0.31	[{'connected_gene': 'SSXP10', 'score': 16.66}, {'connected_gene': 'PLN', 'score': 12.13}, {'connected_gene': 'CEP85L', 'score': 5.46}, {'connected_gene': 'BRD7P3', 'score': 0.39}]
chr6	GH06I118551	118551001	118552177	1.07	[{'connected_gene': 'SSXP10', 'score': 14.89}, {'connected_gene': 'PLN', 'score': 0.77}, {'connected_gene': 'CEP85L', 'score': 0.1}]
chr6	GH06I118580	118580600	118583139	0.99	[{'connected_gene': 'SSXP10', 'score': 16.92}, {'connected_gene': 'PLN', 'score': 0.29}, {'connected_gene': 'CEP85L', 'score': 0.13}]
chr6	GH06I118513	118513972	118515844	0.2	[{'connected_gene': 'SSXP10', 'score': 16.67}, {'connected_gene': 'PLN', 'score': 12.14}, {'connected_gene': 'BRD7P3', 'score': 0.39}, {'connected_gene': 'CEP85L', 'score': 0.08}]
chr6	GH06I118527	118527522	118529308	0.2	[{'connected_gene': 'SSXP10', 'score': 15.25}, {'connected_gene': 'CEP85L', 'score': 5.28}, {'connected_gene': 'PLN', 'score': 0.37}, {'connected_gene': 'BRD7P3', 'score': 0.31}]
chr6	GH06I118375	118375982	118378769	0.96	[{'connected_gene': 'SSXP10', 'score': 12.01}, {'connected_gene': 'CEP85L', 'score': 4.42}, {'connected_gene': 'PLN', 'score': 1.84}, {'connected_gene': 'SLC35F1', 'score': 1.25}, {'connected_gene': 'PIR48915', 'score': 0.34}, {'connected_gene': 'GC06M118401', 'score': 0.34}, {'connected_gene': 'LOC105377967', 'score': 0.06}]
chr6	GH06I118557	118557793	118560023	0.98	[{'connected_gene': 'SSXP10', 'score': 11.12}, {'connected_gene': 'CEP85L', 'score': 9.38}, {'connected_gene': 'PLN', 'score': 0.39}]
chr6	GH06I118564	118564938	118565914	0.65	[{'connected_gene': 'SSXP10', 'score': 16.82}, {'connected_gene': 'CEP85L', 'score': 5.89}, {'connected_gene': 'PLN', 'score': 0.37}]
chr6	GH06I118505	118505272	118509010	0.75	[{'connected_gene': 'SSXP10', 'score': 16.69}, {'connected_gene': 'CEP85L', 'score': 5.66}, {'connected_gene': 'BRD7P3', 'score': 0.44}, {'connected_gene': 'PLN', 'score': 0.26}]
chr6	GH06I118664	118664898	118665288	0.4	[{'connected_gene': 'SSXP10', 'score': 14.51}, {'connected_gene': 'CEP85L', 'score': 0.26}]
chr6	GH06I118655	118655528	118657911	0.51	[{'connected_gene': 'SSXP10', 'score': 16.28}, {'connected_gene': 'CEP85L', 'score': 0.23}]
chr6	GH06I118704	118704205	118707530	1.03	[{'connected_gene': 'SSXP10', 'score': 11.0}, {'connected_gene': 'CEP85L', 'score': 5.59}]
chr6	GH06I118665	118664600	118664801	0.7	[{'connected_gene': 'SSXP10', 'score': 16.26}, {'connected_gene': 'CEP85L', 'score': 5.37}]
chr6	GH06I118680	118680712	118681047	0.49	[{'connected_gene': 'SSXP10', 'score': 13.45}, {'connected_gene': 'CEP85L', 'score': 11.74}]
chr6	GH06I118371	118371111	118375243	0.58	[{'connected_gene': 'SSXP10', 'score': 14.4}, {'connected_gene': 'RPL13AP15', 'score': 5.8}, {'connected_gene': 'CEP85L', 'score': 4.42}, {'connected_gene': 'PIR48915', 'score': 0.31}, {'connected_gene': 'GC06M118401', 'score': 0.31}, {'connected_gene': 'LOC105377967', 'score': 0.06}]