PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000302418	[[32297937, 32300444], [32304436, 32304587], [32306070, 32306287], [32306979, 32307084], [32307243, 32307315], [32307429, 32307490], [32308785, 32308887], [32309949, 32310059], [32310153, 32310215], [32311067, 32311185], [32311775, 32311964], [32317355, 32317499], [32320000, 32320207], [32321633, 32321702], [32322772, 32322966], [32323617, 32323766], [32324449, 32324595], [32324817, 32324922], [32326181, 32326306], [32326447, 32326535], [32327090, 32327146], [32327705, 32327754], [32328254, 32328359], [32329311, 32329385], [32337391, 32337479], [32344775, 32345359]]	[[32304456, 32304587], [32306070, 32306287], [32306979, 32307084], [32307243, 32307315], [32307429, 32307490], [32308785, 32308887], [32309949, 32310059], [32310153, 32310215], [32311067, 32311185], [32311775, 32311964], [32317355, 32317499], [32320000, 32320207], [32321633, 32321702], [32322772, 32322966], [32323617, 32323766], [32324449, 32324595], [32324817, 32324922], [32326181, 32326306], [32326447, 32326535], [32327090, 32327146], [32327705, 32327754], [32328254, 32328359], [32329311, 32329385], [32337391, 32337479], [32344775, 32344901]]
ENST00000493889	[[32306134, 32306287], [32306979, 32307084], [32307429, 32307490], [32308785, 32308887], [32309949, 32310022]]	None
NM_004521	[[32297937, 32300444], [32304436, 32304587], [32306070, 32306287], [32306979, 32307084], [32307243, 32307315], [32307429, 32307490], [32308785, 32308887], [32309949, 32310059], [32310153, 32310215], [32311067, 32311185], [32311775, 32311964], [32317355, 32317499], [32320000, 32320207], [32321633, 32321702], [32322772, 32322966], [32323617, 32323766], [32324449, 32324595], [32324817, 32324922], [32326181, 32326306], [32326447, 32326535], [32327090, 32327146], [32327705, 32327754], [32328254, 32328359], [32329311, 32329385], [32337391, 32337479], [32344775, 32345371]]	[[32304456, 32304587], [32306070, 32306287], [32306979, 32307084], [32307243, 32307315], [32307429, 32307490], [32308785, 32308887], [32309949, 32310059], [32310153, 32310215], [32311067, 32311185], [32311775, 32311964], [32317355, 32317499], [32320000, 32320207], [32321633, 32321702], [32322772, 32322966], [32323617, 32323766], [32324449, 32324595], [32324817, 32324922], [32326181, 32326306], [32326447, 32326535], [32327090, 32327146], [32327705, 32327754], [32328254, 32328359], [32329311, 32329385], [32337391, 32337479], [32344775, 32344901]]

Promoter

Chrom	Start	End	Description
chr10	32345305	32345376	CAGE_peak_1_at_KIF5B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I031925	31925601	31931352	2.68	[{'connected_gene': 'ARHGAP12', 'score': 555.64}, {'connected_gene': 'KIF5B', 'score': 20.54}, {'connected_gene': 'ENSG00000226842', 'score': 12.8}, {'connected_gene': 'EPC1', 'score': 12.7}, {'connected_gene': 'ZEB1-AS1', 'score': 10.52}, {'connected_gene': 'HMGB1P7', 'score': 0.37}]
chr10	GH10I032144	32144723	32145413	0.73	[{'connected_gene': 'EPC1', 'score': 53.53}, {'connected_gene': 'ENSG00000226842', 'score': 34.06}, {'connected_gene': 'AK3P5', 'score': 25.22}, {'connected_gene': 'ZEB1-AS1', 'score': 18.48}, {'connected_gene': 'KIF5B', 'score': 17.03}, {'connected_gene': 'RNU7-22P', 'score': 11.69}, {'connected_gene': 'ENSG00000206660', 'score': 10.82}, {'connected_gene': 'CCDC7', 'score': 9.88}, {'connected_gene': 'ENSG00000234811', 'score': 0.29}]
chr10	GH10I032104	32104155	32105092	0.72	[{'connected_gene': 'RPS4XP11', 'score': 550.77}, {'connected_gene': 'KIF5B', 'score': 10.09}, {'connected_gene': 'ENSG00000235113', 'score': 0.44}]
chr10	GH10I032189	32189254	32190121	0.69	[{'connected_gene': 'PPIAP31', 'score': 550.77}, {'connected_gene': 'KIF5B', 'score': 4.84}, {'connected_gene': 'GC10M032232', 'score': 0.26}]
chr10	GH10I031934	31934939	31937903	0.97	[{'connected_gene': 'KIF5B', 'score': 17.0}, {'connected_gene': 'ARHGAP12', 'score': 5.3}, {'connected_gene': 'RPS4XP11', 'score': 4.57}, {'connected_gene': 'GC10P031934', 'score': 0.77}, {'connected_gene': 'GC10P031969', 'score': 0.29}]
chr10	GH10I031803	31803607	31809422	0.89	[{'connected_gene': 'KIF5B', 'score': 15.39}, {'connected_gene': 'ARHGAP12', 'score': 4.99}, {'connected_gene': 'SPTLC1P1', 'score': 4.58}, {'connected_gene': 'CCDC7', 'score': 4.16}, {'connected_gene': 'ENSG00000222412', 'score': 0.23}, {'connected_gene': 'HMGB1P7', 'score': 0.14}]
chr10	GH10I031818	31818753	31821358	0.72	[{'connected_gene': 'KIF5B', 'score': 7.11}, {'connected_gene': 'ARHGAP12', 'score': 5.01}, {'connected_gene': 'ENSG00000222412', 'score': 0.21}, {'connected_gene': 'HMGB1P7', 'score': 0.16}]
chr10	GH10I031816	31816079	31817247	0.31	[{'connected_gene': 'KIF5B', 'score': 7.11}, {'connected_gene': 'ARHGAP12', 'score': 5.0}, {'connected_gene': 'ENSG00000222412', 'score': 0.21}, {'connected_gene': 'HMGB1P7', 'score': 0.15}]
chr10	GH10I031768	31768019	31772134	1.02	[{'connected_gene': 'KIF5B', 'score': 5.85}, {'connected_gene': 'ARHGAP12', 'score': 3.88}, {'connected_gene': 'ENSG00000222412', 'score': 0.39}, {'connected_gene': 'HMGB1P7', 'score': 0.11}]
chr10	GH10I031822	31822029	31823384	0.43	[{'connected_gene': 'KIF5B', 'score': 9.45}, {'connected_gene': 'ARHGAP12', 'score': 5.01}, {'connected_gene': 'ENSG00000222412', 'score': 0.2}, {'connected_gene': 'HMGB1P7', 'score': 0.16}]
chr10	GH10I031881	31881077	31882673	0.59	[{'connected_gene': 'KIF5B', 'score': 14.8}, {'connected_gene': 'ARHGAP12', 'score': 5.12}, {'connected_gene': 'HMGB1P7', 'score': 0.29}, {'connected_gene': 'ENSG00000222412', 'score': 0.13}]
chr10	GH10I031862	31862201	31862801	1.04	[{'connected_gene': 'KIF5B', 'score': 9.47}, {'connected_gene': 'ARHGAP12', 'score': 5.08}, {'connected_gene': 'HMGB1P7', 'score': 0.23}, {'connected_gene': 'ENSG00000222412', 'score': 0.14}]
chr10	GH10I031863	31863908	31869137	0.95	[{'connected_gene': 'KIF5B', 'score': 14.76}, {'connected_gene': 'ARHGAP12', 'score': 5.09}, {'connected_gene': 'HMGB1P7', 'score': 0.25}, {'connected_gene': 'ENSG00000222412', 'score': 0.14}]
chr10	GH10I032162	32162747	32164272	0.58	[{'connected_gene': 'KIF5B', 'score': 16.83}, {'connected_gene': 'ENSG00000206660', 'score': 11.25}, {'connected_gene': 'ARHGAP12', 'score': 4.38}, {'connected_gene': 'RNU7-22P', 'score': 0.39}, {'connected_gene': 'ENSG00000234811', 'score': 0.23}]
chr10	GH10I031938	31938386	31945662	1.39	[{'connected_gene': 'KIF5B', 'score': 28.22}, {'connected_gene': 'ENSG00000206660', 'score': 11.45}, {'connected_gene': 'ARHGAP12', 'score': 5.26}, {'connected_gene': 'GC10P031934', 'score': 0.44}, {'connected_gene': 'GC10P031969', 'score': 0.31}]
chr10	GH10I031961	31961098	31965114	1.1	[{'connected_gene': 'KIF5B', 'score': 19.71}, {'connected_gene': 'ARHGAP12', 'score': 5.16}, {'connected_gene': 'GC10P031969', 'score': 0.44}, {'connected_gene': 'GC10P031934', 'score': 0.31}]
chr10	GH10I032367	32367601	32368399	1.14	[{'connected_gene': 'KIF5B', 'score': 9.69}, {'connected_gene': 'ENSG00000206660', 'score': 9.69}, {'connected_gene': 'EPC1', 'score': 0.39}, {'connected_gene': 'GC10P032352', 'score': 0.37}, {'connected_gene': 'LOC102031319', 'score': 0.34}]
chr10	GH10I032366	32366201	32366400	0.2	[{'connected_gene': 'KIF5B', 'score': 9.69}, {'connected_gene': 'ENSG00000206660', 'score': 9.69}, {'connected_gene': 'EPC1', 'score': 0.39}, {'connected_gene': 'GC10P032352', 'score': 0.39}, {'connected_gene': 'LOC102031319', 'score': 0.37}]
chr10	GH10I031748	31748819	31752296	1.27	[{'connected_gene': 'KIF5B', 'score': 7.15}, {'connected_gene': 'CCDC7', 'score': 4.41}, {'connected_gene': 'ENSG00000222412', 'score': 0.44}, {'connected_gene': 'LOC101929951', 'score': 0.26}]
chr10	GH10I032059	32059080	32060416	0.85	[{'connected_gene': 'KIF5B', 'score': 11.97}, {'connected_gene': 'ENSG00000206660', 'score': 0.77}, {'connected_gene': 'RPS4XP11', 'score': 0.26}]
chr10	GH10I032095	32095293	32095442	0.83	[{'connected_gene': 'KIF5B', 'score': 11.61}, {'connected_gene': 'ENSG00000206660', 'score': 11.61}, {'connected_gene': 'RPS4XP11', 'score': 0.44}]
chr10	GH10I032077	32077714	32078682	0.52	[{'connected_gene': 'KIF5B', 'score': 20.37}, {'connected_gene': 'ENSG00000206660', 'score': 13.11}, {'connected_gene': 'RPS4XP11', 'score': 0.31}]
chr10	GH10I032179	32179821	32181111	0.51	[{'connected_gene': 'KIF5B', 'score': 10.78}, {'connected_gene': 'ENSG00000206660', 'score': 10.78}, {'connected_gene': 'PPIAP31', 'score': 5.27}, {'connected_gene': 'GC10P032174', 'score': 0.44}]
chr10	GH10I032148	32148691	32152306	1.34	[{'connected_gene': 'KIF5B', 'score': 16.23}, {'connected_gene': 'ZEB1-AS1', 'score': 12.83}, {'connected_gene': 'RNU7-22P', 'score': 12.13}, {'connected_gene': 'ENSG00000206660', 'score': 10.81}, {'connected_gene': 'ENSG00000234811', 'score': 0.28}]
chr10	GH10I031789	31789653	31789782	0.31	[{'connected_gene': 'KIF5B', 'score': 6.46}, {'connected_gene': 'ENSG00000222412', 'score': 0.29}, {'connected_gene': 'HMGB1P7', 'score': 0.13}]
chr10	GH10I031764	31764980	31766179	0.51	[{'connected_gene': 'KIF5B', 'score': 5.27}, {'connected_gene': 'ENSG00000222412', 'score': 0.44}, {'connected_gene': 'HMGB1P7', 'score': 0.11}]
chr10	GH10I031977	31977201	31978543	0.98	[{'connected_gene': 'KIF5B', 'score': 16.79}, {'connected_gene': 'RPL34P19', 'score': 0.44}, {'connected_gene': 'GC10P031969', 'score': 0.44}]
chr10	GH10I032253	32253353	32253918	0.46	[{'connected_gene': 'KIF5B', 'score': 4.42}, {'connected_gene': 'ENSG00000227253', 'score': 0.39}, {'connected_gene': 'RPS24P13', 'score': 0.34}]
chr10	GH10I032138	32138334	32141713	1.41	[{'connected_gene': 'KIF5B', 'score': 17.55}, {'connected_gene': 'RNU7-22P', 'score': 11.98}, {'connected_gene': 'ENSG00000206660', 'score': 10.83}, {'connected_gene': 'ENSG00000234811', 'score': 0.31}]
chr10	GH10I032130	32130853	32132449	0.54	[{'connected_gene': 'KIF5B', 'score': 20.99}, {'connected_gene': 'ENSG00000206660', 'score': 11.01}, {'connected_gene': 'ENSG00000234811', 'score': 0.37}, {'connected_gene': 'RNU7-22P', 'score': 0.26}]
chr10	GH10I032132	32132453	32132622	0.38	[{'connected_gene': 'KIF5B', 'score': 11.0}, {'connected_gene': 'ENSG00000206660', 'score': 11.0}, {'connected_gene': 'ENSG00000234811', 'score': 0.34}, {'connected_gene': 'RNU7-22P', 'score': 0.26}]
chr10	GH10I032136	32136584	32137832	0.51	[{'connected_gene': 'KIF5B', 'score': 5.68}, {'connected_gene': 'ENSG00000234811', 'score': 0.31}, {'connected_gene': 'RNU7-22P', 'score': 0.28}]
chr10	GH10I032170	32170657	32171966	0.72	[{'connected_gene': 'KIF5B', 'score': 4.71}, {'connected_gene': 'RNU7-22P', 'score': 0.77}, {'connected_gene': 'ENSG00000234811', 'score': 0.22}]
chr10	GH10I032003	32003941	32005282	0.86	[{'connected_gene': 'KIF5B', 'score': 23.22}, {'connected_gene': 'ENSG00000206660', 'score': 12.08}, {'connected_gene': 'GC10P032002', 'score': 0.77}]
chr10	GH10I031948	31948910	31949651	0.31	[{'connected_gene': 'KIF5B', 'score': 5.25}, {'connected_gene': 'GC10P031934', 'score': 0.37}, {'connected_gene': 'GC10P031969', 'score': 0.34}]
chr10	GH10I032053	32053400	32057446	2.24	[{'connected_gene': 'KIF5B', 'score': 579.24}, {'connected_gene': 'ENSG00000206660', 'score': 550.77}, {'connected_gene': 'GC10P032057', 'score': 550.77}, {'connected_gene': 'GC10P032002', 'score': 0.23}]
chr10	GH10I032012	32012640	32012843	0.22	[{'connected_gene': 'KIF5B', 'score': 40.22}, {'connected_gene': 'ENSG00000206660', 'score': 12.26}, {'connected_gene': 'GC10P032002', 'score': 0.39}]
chr10	GH10I032049	32049773	32050756	0.72	[{'connected_gene': 'KIF5B', 'score': 22.28}, {'connected_gene': 'GC10P032002', 'score': 0.25}]
chr10	GH10I032046	32046915	32047289	0.44	[{'connected_gene': 'KIF5B', 'score': 11.58}, {'connected_gene': 'GC10P032002', 'score': 0.26}]
chr10	GH10I032042	32042388	32043606	0.4	[{'connected_gene': 'KIF5B', 'score': 10.23}, {'connected_gene': 'GC10P032002', 'score': 0.26}]
chr10	GH10I031912	31912312	31913600	0.9	[{'connected_gene': 'HMGB1P7', 'score': 550.77}, {'connected_gene': 'KIF5B', 'score': 10.28}, {'connected_gene': 'ENSG00000206660', 'score': 10.28}, {'connected_gene': 'ARHGAP12', 'score': 5.23}, {'connected_gene': 'ENSG00000222412', 'score': 0.1}]
chr10	GH10I032142	32142234	32143955	0.58	[{'connected_gene': 'RNU7-22P', 'score': 11.67}, {'connected_gene': 'KIF5B', 'score': 10.82}, {'connected_gene': 'ENSG00000206660', 'score': 10.82}, {'connected_gene': 'ENSG00000234811', 'score': 0.29}]
chr10	GH10I031752	31752814	31761954	1.74	[{'connected_gene': 'ENSG00000222412', 'score': 550.77}, {'connected_gene': 'EPC1', 'score': 15.57}, {'connected_gene': 'ENSG00000226842', 'score': 12.64}, {'connected_gene': 'KIF5B', 'score': 8.29}, {'connected_gene': 'ZEB1', 'score': 1.6}, {'connected_gene': 'HMGB1P7', 'score': 0.1}]
chr10	GH10I032000	32000410	32003271	0.46	[{'connected_gene': 'GC10P032002', 'score': 550.77}, {'connected_gene': 'KIF5B', 'score': 29.04}, {'connected_gene': 'ARHGAP12', 'score': 4.61}, {'connected_gene': 'LOC105376485', 'score': 0.44}]
chr10	GH10I031932	31932935	31933882	0.31	[{'connected_gene': 'GC10P031934', 'score': 550.77}, {'connected_gene': 'KIF5B', 'score': 4.64}, {'connected_gene': 'ARHGAP12', 'score': 0.77}]
chr10	GH10I032111	32111291	32112832	0.59	[{'connected_gene': 'ENSG00000234811', 'score': 550.77}, {'connected_gene': 'KIF5B', 'score': 25.95}, {'connected_gene': 'ENSG00000206660', 'score': 11.56}, {'connected_gene': 'ENSG00000235113', 'score': 0.77}, {'connected_gene': 'RNU7-22P', 'score': 0.21}]