PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000591891	[[68049569, 68049761], [68104441, 68104522], [68127019, 68127116], [68128135, 68128334]]	[[68128228, 68128334]]
ENST00000588112	[[68071386, 68071531], [68096798, 68098351]]	None
ENST00000392671	[[68071425, 68071531], [68096798, 68096907], [68127019, 68127116], [68128135, 68131744]]	[[68128228, 68129485]]
ENST00000283936	[[68071425, 68071531], [68096798, 68096907], [68104441, 68104522], [68127019, 68127116], [68128135, 68131744]]	[[68128228, 68129485]]
ENST00000589377	[[68071461, 68071531], [68128135, 68131749]]	[[68128228, 68129485]]
ENST00000586462	[[68092780, 68093067], [68128135, 68129745]]	[[68093043, 68093067], [68128135, 68129485]]
ENST00000392670	[[68100994, 68101216], [68104441, 68104522], [68127019, 68127116], [68128135, 68131744]]	[[68128228, 68129485]]
ENST00000585558	[[68100994, 68101216], [68104441, 68104522], [68127019, 68127116], [68128135, 68131749]]	[[68127104, 68127116], [68128135, 68129485]]
ENST00000587698	[[68101138, 68101216], [68127019, 68127116], [68127493, 68127621], [68128135, 68128421]]	[[68128228, 68128421]]
ENST00000587892	[[68101140, 68101216], [68104441, 68104522], [68127019, 68127116], [68127493, 68127621], [68128135, 68128335]]	[[68128228, 68128335]]
NM_170741	[[68071365, 68071531], [68096798, 68096907], [68127019, 68127116], [68128135, 68131749]]	[[68127104, 68127116], [68128135, 68129485]]
NM_018658	[[68071365, 68071531], [68096798, 68096907], [68104441, 68104522], [68127019, 68127116], [68128135, 68131749]]	[[68127104, 68127116], [68128135, 68129485]]
NM_001270422	[[68071365, 68071531], [68096798, 68096907], [68104441, 68104522], [68127019, 68127116], [68127493, 68127621], [68128135, 68131749]]	[[68128228, 68129485]]
NM_001291622	[[68071365, 68071531], [68096798, 68096907], [68104441, 68104522], [68106501, 68106583], [68127019, 68127116], [68128135, 68131749]]	[[68127104, 68127116], [68128135, 68129485]]
NM_001291623	[[68100985, 68101216], [68127019, 68127116], [68128135, 68131749]]	[[68127104, 68127116], [68128135, 68129485]]
NM_001291624	[[68100985, 68101216], [68127019, 68127116], [68127493, 68127621], [68128135, 68131749]]	[[68128228, 68129485]]
NM_170742	[[68100985, 68101216], [68104441, 68104522], [68127019, 68127116], [68128135, 68131749]]	[[68127104, 68127116], [68128135, 68129485]]
NM_001291625	[[68100985, 68101216], [68104441, 68104522], [68127019, 68127116], [68127493, 68127621], [68128135, 68131749]]	[[68128228, 68129485]]

Promoter

Chrom	Start	End	Description
chr17	68071356	68071379	CAGE_peak_3_at_KCNJ16_5end
chr17	68071389	68071396	CAGE_peak_7_at_KCNJ16_5end
chr17	68071458	68071481	CAGE_peak_1_at_KCNJ16_5end
chr17	68100989	68101026	CAGE_peak_5_at_KCNJ16_5end
chr17	68101047	68101078	CAGE_peak_4_at_KCNJ16_5end
chr17	68101098	68101109	CAGE_peak_6_at_KCNJ16_5end
chr17	68101117	68101162	CAGE_peak_2_at_KCNJ16_5end
chr17	68128382	68128407	CAGE_peak_10_at_KCNJ16_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr17	GH17I070053	70053058	70054291	0.63	[{'connected_gene': 'KCNJ16', 'score': 555.51}, {'connected_gene': 'LOC105371881', 'score': 4.74}, {'connected_gene': 'LINC01028', 'score': 0.77}, {'connected_gene': 'GC17P070078', 'score': 0.34}]
chr17	GH17I070080	70080686	70080809	0.2	[{'connected_gene': 'KCNJ16', 'score': 16.85}, {'connected_gene': 'LOC105371881', 'score': 11.55}, {'connected_gene': 'GC17P070078', 'score': 0.77}, {'connected_gene': 'GC17P070128', 'score': 0.25}]
chr17	GH17I070104	70104880	70104939	0.5	[{'connected_gene': 'KCNJ16', 'score': 550.23}, {'connected_gene': 'LOC105371881', 'score': 11.43}, {'connected_gene': 'GC17P070128', 'score': 0.34}, {'connected_gene': 'GC17P070078', 'score': 0.31}]
chr17	GH17I070082	70082404	70082802	0.22	[{'connected_gene': 'KCNJ16', 'score': 17.65}, {'connected_gene': 'LOC105371881', 'score': 11.45}, {'connected_gene': 'GC17P070078', 'score': 0.77}, {'connected_gene': 'GC17P070128', 'score': 0.25}]
chr17	GH17I070109	70109314	70111445	0.88	[{'connected_gene': 'KCNJ16', 'score': 11.75}, {'connected_gene': 'LOC105371881', 'score': 0.37}, {'connected_gene': 'GC17P070128', 'score': 0.37}, {'connected_gene': 'GC17P070078', 'score': 0.29}]
chr17	GH17I070029	70029454	70031173	0.2	[{'connected_gene': 'KCNJ16', 'score': 11.27}, {'connected_gene': 'PIR50953', 'score': 0.77}, {'connected_gene': 'GC17M070016', 'score': 0.44}, {'connected_gene': 'LOC105371881', 'score': 0.15}]
chr17	GH17I069997	69997380	69997529	0.46	[{'connected_gene': 'KCNJ16', 'score': 10.98}, {'connected_gene': 'ENSG00000199801', 'score': 0.39}, {'connected_gene': 'GC17M070016', 'score': 0.34}, {'connected_gene': 'LOC105371881', 'score': 0.12}]
chr17	GH17I070089	70089740	70090193	0.74	[{'connected_gene': 'KCNJ16', 'score': 12.93}, {'connected_gene': 'GC17P070078', 'score': 0.39}, {'connected_gene': 'LOC105371881', 'score': 0.28}, {'connected_gene': 'GC17P070128', 'score': 0.28}]
chr17	GH17I070074	70074008	70075823	1.06	[{'connected_gene': 'KCNJ16', 'score': 566.89}, {'connected_gene': 'LOC105371881', 'score': 10.72}, {'connected_gene': 'GC17P070078', 'score': 0.77}]
chr17	GH17I069856	69856370	69858018	0.93	[{'connected_gene': 'KCNJ16', 'score': 11.09}, {'connected_gene': 'LINC01497', 'score': 4.44}, {'connected_gene': 'GC17P069832', 'score': 0.34}, {'connected_gene': 'GC17M069883', 'score': 0.31}, {'connected_gene': 'LINC01483', 'score': 0.06}]
chr17	GH17I070059	70059407	70059500	0.31	[{'connected_gene': 'KCNJ16', 'score': 0.44}, {'connected_gene': 'LINC01028', 'score': 0.44}, {'connected_gene': 'GC17P070078', 'score': 0.37}, {'connected_gene': 'LOC105371881', 'score': 0.2}]
chr17	GH17I069853	69853120	69854635	0.69	[{'connected_gene': 'KCNJ16', 'score': 11.09}, {'connected_gene': 'GC17P069832', 'score': 0.34}, {'connected_gene': 'GC17M069883', 'score': 0.31}, {'connected_gene': 'LINC01483', 'score': 0.06}]
chr17	GH17I069606	69606178	69611112	1.25	[{'connected_gene': 'KCNJ16', 'score': 4.11}, {'connected_gene': 'GC17M069586', 'score': 0.44}, {'connected_gene': 'LINC01483', 'score': 0.29}, {'connected_gene': 'GC17M069657', 'score': 0.22}]
chr17	GH17I070123	70123307	70123445	0.46	[{'connected_gene': 'KCNJ2', 'score': 11.98}, {'connected_gene': 'LOC105371881', 'score': 0.44}, {'connected_gene': 'GC17P070128', 'score': 0.44}, {'connected_gene': 'GC17P070078', 'score': 0.25}, {'connected_gene': 'KCNJ16', 'score': 0.2}]
chr17	GH17I070121	70121171	70121317	0.34	[{'connected_gene': 'KCNJ2', 'score': 5.83}, {'connected_gene': 'LOC105371881', 'score': 0.44}, {'connected_gene': 'GC17P070128', 'score': 0.44}, {'connected_gene': 'GC17P070078', 'score': 0.26}, {'connected_gene': 'KCNJ16', 'score': 0.2}]
chr17	GH17I070099	70099201	70100149	0.76	[{'connected_gene': 'LOC105371881', 'score': 11.85}, {'connected_gene': 'KCNJ16', 'score': 8.68}, {'connected_gene': 'GC17P070078', 'score': 0.34}, {'connected_gene': 'GC17P070128', 'score': 0.31}]
chr17	GH17I070119	70119966	70120836	0.51	[{'connected_gene': 'LOC105371881', 'score': 0.44}, {'connected_gene': 'GC17P070128', 'score': 0.44}, {'connected_gene': 'GC17P070078', 'score': 0.26}, {'connected_gene': 'KCNJ16', 'score': 0.2}]
chr17	GH17I070127	70127320	70127469	0.31	[{'connected_gene': 'LOC105371881', 'score': 550.77}, {'connected_gene': 'GC17P070128', 'score': 550.77}, {'connected_gene': 'GC17P070078', 'score': 0.25}, {'connected_gene': 'KCNJ16', 'score': 0.19}]
chr17	GH17I070131	70131192	70131384	0.25	[{'connected_gene': 'LOC105371881', 'score': 0.77}, {'connected_gene': 'LOC105371882', 'score': 0.31}, {'connected_gene': 'KCNJ16', 'score': 0.18}]
chr17	GH17I069059	69059113	69063562	1.46	[{'connected_gene': 'ABCA9', 'score': 552.22}, {'connected_gene': 'KCNJ16', 'score': 6.06}, {'connected_gene': 'ABCA6', 'score': 5.79}, {'connected_gene': 'ABCA10', 'score': 4.74}, {'connected_gene': 'GC17P069034', 'score': 0.31}]
chr17	GH17I070072	70072801	70073000	0.31	[{'connected_gene': 'GC17P070078', 'score': 0.44}, {'connected_gene': 'KCNJ16', 'score': 0.37}, {'connected_gene': 'LOC105371881', 'score': 0.22}]
chr17	GH17I070070	70070460	70070549	0.49	[{'connected_gene': 'GC17P070078', 'score': 0.44}, {'connected_gene': 'KCNJ16', 'score': 0.37}, {'connected_gene': 'LOC105371881', 'score': 0.22}]
chr17	GH17I070073	70073020	70073169	0.2	[{'connected_gene': 'GC17P070078', 'score': 0.44}, {'connected_gene': 'KCNJ16', 'score': 0.37}, {'connected_gene': 'LOC105371881', 'score': 0.22}]